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The map label for this gene is 116515907

Identifier: 116515907

GI number: 116515907

Start: 1214240

End: 1214494

Strand: Reverse

Name: 116515907

Synonym: SPD_1184

Alternate gene names: NA

Gene position: 1214494-1214240 (Counterclockwise)

Preceding gene: 116516935

Following gene: 116516289

Centisome position: 59.36

GC content: 35.69

Gene sequence:

>255_bases
ATGAAACGAATTACCGCTAATCAATATCAGACATCAGAGCGTTATTATAAGCTCCCCAAACTTTTATTTGAGAGTGAACG
GTATAAGAATATGAAACTGGAGGTTAAGGTGGTTTACTCAGTTTTAAAAGATCGGTTGGAGTTGTCTTTGAGCAAAGGTT
GGATTGATGAGGATGGGGCTATTTATTTGATTTATTCCAATTCAAATTTGATGGCACTTTTAGGCTGTTCAAAGTCAAAA
TTACTCTCCATGTGA

Upstream 100 bases:

>100_bases
TTGTTGAAGCCATCTCTCTTATGGCTGAATTAGAAAAAAGTGGCTTGGTTCGATTGGAATCAAGTGGAGATTTAATACTC
AAAGAACTTGGAGGAGCGCT

Downstream 100 bases:

>100_bases
GTTTGAAGTGACATTTTTAGATGATTACCATAAAAAACATAACTACCCACTATTTTACGAATCCTATCTTCAAAACGTTA
TGGAATTCCTTGAAAGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Replication-Associated Protein RepA; Replication Initiation Protein Rep; Replication Protein; Replication Initiator Protein A; Replication Initiator A Domain-Containing Protein; PrgW Protein; Replication Initiator A Protein; Replication Initiation Protein; RepA Protein; Replication Initiation Protein RepA; Replication Protein A; Plasmid Replication Initiation Protein RepA; Replication Initiator A N-Terminal; Replication Initiator A

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MKRITANQYQTSERYYKLPKLLFESERYKNMKLEVKVVYSVLKDRLELSLSKGWIDEDGAIYLIYSNSNLMALLGCSKSK
LLSM

Sequences:

>Translated_84_residues
MKRITANQYQTSERYYKLPKLLFESERYKNMKLEVKVVYSVLKDRLELSLSKGWIDEDGAIYLIYSNSNLMALLGCSKSK
LLSM
>Mature_84_residues
MKRITANQYQTSERYYKLPKLLFESERYKNMKLEVKVVYSVLKDRLELSLSKGWIDEDGAIYLIYSNSNLMALLGCSKSK
LLSM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9849; Mature: 9849

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRITANQYQTSERYYKLPKLLFESERYKNMKLEVKVVYSVLKDRLELSLSKGWIDEDGA
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCE
IYLIYSNSNLMALLGCSKSKLLSM
EEEEECCCCEEEEEECCHHHHCCC
>Mature Secondary Structure
MKRITANQYQTSERYYKLPKLLFESERYKNMKLEVKVVYSVLKDRLELSLSKGWIDEDGA
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCE
IYLIYSNSNLMALLGCSKSKLLSM
EEEEECCCCEEEEEECCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA