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The map label for this gene is yqfA [C]

Identifier: 116515763

GI number: 116515763

Start: 1314649

End: 1315296

Strand: Direct

Name: yqfA [C]

Synonym: SPD_1295

Alternate gene names: 116515763

Gene position: 1314649-1315296 (Clockwise)

Preceding gene: 116516428

Following gene: 116515401

Centisome position: 64.25

GC content: 41.36

Gene sequence:

>648_bases
ATGAACACTAGTCTTAAACTCAGCAAACAACTCAGTTTTGGAGAGGAGATTGCTAATAGCGTGACCCATGCTGTGGGTGC
AGTCATCATGCTTATCTTGCTGCCTATTTCATCCATCTATAGTTATGAAGCACACGGATTTTTATCCTCTATCGGCGTTT
CCATTTTCGTCATCAGTCTCTTTCTCATGTTCCTATCATCCACCATTTATCACTCTATGGCCTATGGTTCGACCCACAAA
TATGTTTTGCGAATCATTGACCATTCTATGATTTACGTTGCCATTGCCGGCTCATACACGCCCGTTGTCTTGACCTTGAT
GAATAACTGGTTTGGCTATCTGATTATTGTCATCCAATGGGGAACGACCATCTTTGGTATTCTCTATAAAATCTTTGCTA
AAAAGGTCAATGAGAAATTTAGCCTTGCTCTTTACCTGATTATGGGCTGGTTGGTTCTGGCTATCATTCCTGCCATTATC
AGTCAAACGACACCCGTTTTCTGGAGTCTCATGGTAACTGGCGGACTCTGTTATACAGTTGGAGCTGGATTTTATGCCAA
GAAAAAACCTTATTTCCACATGATTTGGCATCTCTTTATCCTAGCTGCGTCCGCACTCCAATACATCGCTATTGTTTATT
ACATGTAA

Upstream 100 bases:

>100_bases
TTGACCCAGCTAACCCTATTATCCAAACCAGCTGCCAAACCGTCAAACTCTATCATCAAACTCTAGACTTAATCGATCAT
ACTCAAGAGGAGGTAATCCA

Downstream 100 bases:

>100_bases
AAAAGTTGAGAAATTCAATCTCAACTTTTTTCTTTACACATATTGATAAAGTACTGGTGCAAGCGCACATCATCAGTCAA
TTCTGGATGAAAAGAACTTA

Product: hemolysin

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNTSLKLSKQLSFGEEIANSVTHAVGAVIMLILLPISSIYSYEAHGFLSSIGVSIFVISLFLMFLSSTIYHSMAYGSTHK
YVLRIIDHSMIYVAIAGSYTPVVLTLMNNWFGYLIIVIQWGTTIFGILYKIFAKKVNEKFSLALYLIMGWLVLAIIPAII
SQTTPVFWSLMVTGGLCYTVGAGFYAKKKPYFHMIWHLFILAASALQYIAIVYYM

Sequences:

>Translated_215_residues
MNTSLKLSKQLSFGEEIANSVTHAVGAVIMLILLPISSIYSYEAHGFLSSIGVSIFVISLFLMFLSSTIYHSMAYGSTHK
YVLRIIDHSMIYVAIAGSYTPVVLTLMNNWFGYLIIVIQWGTTIFGILYKIFAKKVNEKFSLALYLIMGWLVLAIIPAII
SQTTPVFWSLMVTGGLCYTVGAGFYAKKKPYFHMIWHLFILAASALQYIAIVYYM
>Mature_215_residues
MNTSLKLSKQLSFGEEIANSVTHAVGAVIMLILLPISSIYSYEAHGFLSSIGVSIFVISLFLMFLSSTIYHSMAYGSTHK
YVLRIIDHSMIYVAIAGSYTPVVLTLMNNWFGYLIIVIQWGTTIFGILYKIFAKKVNEKFSLALYLIMGWLVLAIIPAII
SQTTPVFWSLMVTGGLCYTVGAGFYAKKKPYFHMIWHLFILAASALQYIAIVYYM

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=227, Percent_Identity=28.1938325991189, Blast_Score=67, Evalue=8e-12,
Organism=Escherichia coli, GI1789266, Length=206, Percent_Identity=33.9805825242718, Blast_Score=111, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 24119; Mature: 24119

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSLKLSKQLSFGEEIANSVTHAVGAVIMLILLPISSIYSYEAHGFLSSIGVSIFVISL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLMFLSSTIYHSMAYGSTHKYVLRIIDHSMIYVAIAGSYTPVVLTLMNNWFGYLIIVIQW
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
GTTIFGILYKIFAKKVNEKFSLALYLIMGWLVLAIIPAIISQTTPVFWSLMVTGGLCYTV
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHH
GAGFYAKKKPYFHMIWHLFILAASALQYIAIVYYM
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTSLKLSKQLSFGEEIANSVTHAVGAVIMLILLPISSIYSYEAHGFLSSIGVSIFVISL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLMFLSSTIYHSMAYGSTHKYVLRIIDHSMIYVAIAGSYTPVVLTLMNNWFGYLIIVIQW
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
GTTIFGILYKIFAKKVNEKFSLALYLIMGWLVLAIIPAIISQTTPVFWSLMVTGGLCYTV
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHH
GAGFYAKKKPYFHMIWHLFILAASALQYIAIVYYM
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]