Click here to switch to the map view.

The map label for this gene is sarA [H]

Identifier: 116515710

GI number: 116515710

Start: 763460

End: 764164

Strand: Direct

Name: sarA [H]

Synonym: SPD_0750

Alternate gene names: 116515710

Gene position: 763460-764164 (Clockwise)

Preceding gene: 116516002

Following gene: 116516266

Centisome position: 37.31

GC content: 36.03

Gene sequence:

>705_bases
GTGGTCCTGAGCACGTTAGCTATTTTAGTGGCTTGTGGAAAAACTGATAAAGAAGCAGATGCACCGACAACATTTTCTTA
TGTCTATGCAGTAGATCCAGCATCATTGGGCTACAGTATAACGACTCGAACATCGACGACAGACGTTATTGGAAATGTTA
TTGATGGTTTGATGGAAAATGATAAATACGGCAATGTTGCTCCTTCTCAAAAAGACTATGATTTGAATAGTACAGGATGG
GCTCCAAGCTATCAAGATCCAGCGTCTTACTTGAATATTATGGATCCAAAATCTGGTTCTGCCATGAAACACCTTGGTAT
TACGAAAGGAAAAGATAAGGATGTTGTAGCTAAACCTGGTTTGGATAAATATAAGAAATTGTTAGAAGATGCTGTTTCTG
AGACCACTGACCTAGAGAAGAGATATGAAAAATATGCCAAAGCTCAAGCTTGGTCGACAGATAGTTCATTATTGATGCCA
ACAGCTTCATCTGGTGGTTCTCCAATTGTAAGTAACGTAGTACCATTCTCAAAACCATACTCACAAGTTGGTATTAAGGG
GGAACCATATATCTTTAAAGGAATGAAATTGCAAAAAGATATTGTTACAACAAAAGAATATAACGAGGTTTTTAAAAAAT
GGCAAAAAGAAAAATTGGAATCCAATAGCAAATACCAAAAAGAACTAGAAAAACACATTAAATAA

Upstream 100 bases:

>100_bases
GGCGATATTGAAGCGCCAGAAGGTTGGATTGTAAAAGTAGATTAAAATAAACCAAAGGAGATTTTTTATGAAATAGAAAA
AGTGGCTCTTAACAGCAGGA

Downstream 100 bases:

>100_bases
GGAATGGTATTGATCTTGATAAAATTTTTAAAATACTGTCATTTTGAATATAAAGGAGTTTGATATGGAGTGGATTAGAT
TAATAGGAATAGCAATCATT

Product: hypothetical protein

Products: NA

Alternate protein names: 76 kDa cell surface lipoprotein [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MVLSTLAILVACGKTDKEADAPTTFSYVYAVDPASLGYSITTRTSTTDVIGNVIDGLMENDKYGNVAPSQKDYDLNSTGW
APSYQDPASYLNIMDPKSGSAMKHLGITKGKDKDVVAKPGLDKYKKLLEDAVSETTDLEKRYEKYAKAQAWSTDSSLLMP
TASSGGSPIVSNVVPFSKPYSQVGIKGEPYIFKGMKLQKDIVTTKEYNEVFKKWQKEKLESNSKYQKELEKHIK

Sequences:

>Translated_234_residues
MVLSTLAILVACGKTDKEADAPTTFSYVYAVDPASLGYSITTRTSTTDVIGNVIDGLMENDKYGNVAPSQKDYDLNSTGW
APSYQDPASYLNIMDPKSGSAMKHLGITKGKDKDVVAKPGLDKYKKLLEDAVSETTDLEKRYEKYAKAQAWSTDSSLLMP
TASSGGSPIVSNVVPFSKPYSQVGIKGEPYIFKGMKLQKDIVTTKEYNEVFKKWQKEKLESNSKYQKELEKHIK
>Mature_234_residues
MVLSTLAILVACGKTDKEADAPTTFSYVYAVDPASLGYSITTRTSTTDVIGNVIDGLMENDKYGNVAPSQKDYDLNSTGW
APSYQDPASYLNIMDPKSGSAMKHLGITKGKDKDVVAKPGLDKYKKLLEDAVSETTDLEKRYEKYAKAQAWSTDSSLLMP
TASSGGSPIVSNVVPFSKPYSQVGIKGEPYIFKGMKLQKDIVTTKEYNEVFKKWQKEKLESNSKYQKELEKHIK

Specific function: May be involved in the expression of cell surface properties important for colonization of the human oral cavity. It may also be involved in uptake processes [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 25851; Mature: 25851

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLSTLAILVACGKTDKEADAPTTFSYVYAVDPASLGYSITTRTSTTDVIGNVIDGLMEN
CHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECHHHCCEEEEECCCHHHHHHHHHHHHHCC
DKYGNVAPSQKDYDLNSTGWAPSYQDPASYLNIMDPKSGSAMKHLGITKGKDKDVVAKPG
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCEECCC
LDKYKKLLEDAVSETTDLEKRYEKYAKAQAWSTDSSLLMPTASSGGSPIVSNVVPFSKPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHCCCCCCCH
SQVGIKGEPYIFKGMKLQKDIVTTKEYNEVFKKWQKEKLESNSKYQKELEKHIK
HHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MVLSTLAILVACGKTDKEADAPTTFSYVYAVDPASLGYSITTRTSTTDVIGNVIDGLMEN
CHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECHHHCCEEEEECCCHHHHHHHHHHHHHCC
DKYGNVAPSQKDYDLNSTGWAPSYQDPASYLNIMDPKSGSAMKHLGITKGKDKDVVAKPG
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCEECCC
LDKYKKLLEDAVSETTDLEKRYEKYAKAQAWSTDSSLLMPTASSGGSPIVSNVVPFSKPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHCCCCCCCH
SQVGIKGEPYIFKGMKLQKDIVTTKEYNEVFKKWQKEKLESNSKYQKELEKHIK
HHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1339408 [H]