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The map label for this gene is ybjZ [C]

Identifier: 116515615

GI number: 116515615

Start: 1808670

End: 1809632

Strand: Reverse

Name: ybjZ [C]

Synonym: SPD_1824

Alternate gene names: 116515615

Gene position: 1809632-1808670 (Counterclockwise)

Preceding gene: 116516875

Following gene: 116516442

Centisome position: 88.44

GC content: 37.49

Gene sequence:

>963_bases
ATGAACATGTCAAATATTACTATAGATGGGCAAGAAATGGATCTGAGTCAAACGATGCCTTCTTATGCTCAAGTAGTGAG
TCTTTATGATGATACAAGTATCTCTGTTAGTAATAATGAGACGGACAAAGTGTTGGCTGGCTCCCTCTATACTGATACAA
ATGAACAGGGATTAACGATTCCAAGCAGTTTACTAAAAAATTGGAATGAACAGACAGGAAAAAATTTGACAGCTAATGAT
CTTATTGGCAAATCAGTCTCAGCCAGCATTGTAGAAAGTGCTGCCGAAGCTAGTAAGATTGCTCAATTTCAAACGAAGAT
TGTACGTGTAATCAATGATGAAGATGACATGGAGGACAGCAACAGTTTCATGCTGTCTCATCAAATGGAAACGATTTTGA
AAGAGGCTGGATTTACGAAAGCTGTATCTTATTTTATCTTGGAACTCAAAGATCCATCACAGACAAAAGTAGTAACAGAA
GAATTACAGAAAAATAAGAAGTATACTGTGCTTTCTCAACAGAGAGTTCTTGATATTGTGATTACCTTTATTCGTGTTAT
TCAGGGATTATTGATTGTGCTTTCATCACAAGCTATTGTGGTAGCAGCGGTTATGATTGGTATCATTATTTACATCAATA
TCATGCAACGTTCCAAGGAAATAGGTGTCATGAAAGCAGTTGGTTATCAGAATCGTGGTGTCAAAGGAATTTTTATTTAC
GAGGCTATCTGGATTGTAGGCATCGCCTTGCTGCTGGCATTTTTGGTTGCACAAGGGGTGGGAAGTTTGGCGAATGCGAT
TGTAAGTCACTTTTACCCATCCATCACTAAGGTTTTTGAATTAAATCTTTTATCTGTTTTAGGAACTCTAGTTTTCGCAC
TATTACTTGGTTATGTCTCAGCCTACTTCCCGGCGCGTAAGATTAGTAAAATGGATCCTGTAGAATCGTTACGCTATGAA
TAA

Upstream 100 bases:

>100_bases
CTTTTACGAGGCTTTTTTATCCTGCTCTTGTTTCAATTGACTATAGTTCACGGATACAGTTGGGAAAGAAGCTATTAAAT
ATTTGGAGAGTCCTTTTGGG

Downstream 100 bases:

>100_bases
TAAGGGATTCCTTGATTTACAGTCTTAAAAAGAAACTCACATAGAAAAACAATGGCCATACTTGCAATTCAACTCAAATA
GTTGTATAATAGGTTTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MNMSNITIDGQEMDLSQTMPSYAQVVSLYDDTSISVSNNETDKVLAGSLYTDTNEQGLTIPSSLLKNWNEQTGKNLTAND
LIGKSVSASIVESAAEASKIAQFQTKIVRVINDEDDMEDSNSFMLSHQMETILKEAGFTKAVSYFILELKDPSQTKVVTE
ELQKNKKYTVLSQQRVLDIVITFIRVIQGLLIVLSSQAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRGVKGIFIY
EAIWIVGIALLLAFLVAQGVGSLANAIVSHFYPSITKVFELNLLSVLGTLVFALLLGYVSAYFPARKISKMDPVESLRYE

Sequences:

>Translated_320_residues
MNMSNITIDGQEMDLSQTMPSYAQVVSLYDDTSISVSNNETDKVLAGSLYTDTNEQGLTIPSSLLKNWNEQTGKNLTAND
LIGKSVSASIVESAAEASKIAQFQTKIVRVINDEDDMEDSNSFMLSHQMETILKEAGFTKAVSYFILELKDPSQTKVVTE
ELQKNKKYTVLSQQRVLDIVITFIRVIQGLLIVLSSQAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRGVKGIFIY
EAIWIVGIALLLAFLVAQGVGSLANAIVSHFYPSITKVFELNLLSVLGTLVFALLLGYVSAYFPARKISKMDPVESLRYE
>Mature_320_residues
MNMSNITIDGQEMDLSQTMPSYAQVVSLYDDTSISVSNNETDKVLAGSLYTDTNEQGLTIPSSLLKNWNEQTGKNLTAND
LIGKSVSASIVESAAEASKIAQFQTKIVRVINDEDDMEDSNSFMLSHQMETILKEAGFTKAVSYFILELKDPSQTKVVTE
ELQKNKKYTVLSQQRVLDIVITFIRVIQGLLIVLSSQAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRGVKGIFIY
EAIWIVGIALLLAFLVAQGVGSLANAIVSHFYPSITKVFELNLLSVLGTLVFALLLGYVSAYFPARKISKMDPVESLRYE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 35288; Mature: 35288

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMSNITIDGQEMDLSQTMPSYAQVVSLYDDTSISVSNNETDKVLAGSLYTDTNEQGLTI
CCCCCEEECCCCCCHHHHCHHHHHHHHHHCCCEEEECCCCCCHHEECCCCCCCCCCCCCC
PSSLLKNWNEQTGKNLTANDLIGKSVSASIVESAAEASKIAQFQTKIVRVINDEDDMEDS
HHHHHHCCHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NSFMLSHQMETILKEAGFTKAVSYFILELKDPSQTKVVTEELQKNKKYTVLSQQRVLDIV
CHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHH
ITFIRVIQGLLIVLSSQAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRGVKGIFIY
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHH
EAIWIVGIALLLAFLVAQGVGSLANAIVSHFYPSITKVFELNLLSVLGTLVFALLLGYVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYFPARKISKMDPVESLRYE
HHCCHHHHCCCCCHHHHCCC
>Mature Secondary Structure
MNMSNITIDGQEMDLSQTMPSYAQVVSLYDDTSISVSNNETDKVLAGSLYTDTNEQGLTI
CCCCCEEECCCCCCHHHHCHHHHHHHHHHCCCEEEECCCCCCHHEECCCCCCCCCCCCCC
PSSLLKNWNEQTGKNLTANDLIGKSVSASIVESAAEASKIAQFQTKIVRVINDEDDMEDS
HHHHHHCCHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NSFMLSHQMETILKEAGFTKAVSYFILELKDPSQTKVVTEELQKNKKYTVLSQQRVLDIV
CHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHH
ITFIRVIQGLLIVLSSQAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRGVKGIFIY
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHH
EAIWIVGIALLLAFLVAQGVGSLANAIVSHFYPSITKVFELNLLSVLGTLVFALLLGYVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYFPARKISKMDPVESLRYE
HHCCHHHHCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]