Definition | Streptococcus pneumoniae D39, complete genome. |
---|---|
Accession | NC_008533 |
Length | 2,046,115 |
Click here to switch to the map view.
The map label for this gene is yitL [H]
Identifier: 116515585
GI number: 116515585
Start: 852077
End: 852970
Strand: Direct
Name: yitL [H]
Synonym: SPD_0836
Alternate gene names: 116515585
Gene position: 852077-852970 (Clockwise)
Preceding gene: 116516857
Following gene: 116517068
Centisome position: 41.64
GC content: 44.41
Gene sequence:
>894_bases TTGGCATTGCTGGCTGAGTTTTATTCGAAAGAAGGAAATATGAATACAAATCTTGCAAGTTTTATCGTTGGACTGATCAT CGATGAAAATGACCGTTTTTACTTTGTGCAAAAGGATGGTCAAACCTATGCTCTTGCTAAGGAAGAAGGTCAACATACAG TAGGGGATACGGTCAAAGGTTTTGCATACACGGATATGAAGCAAAAACTCCGCCTGACAACCTTAGAAGTGACTGCCACT CAGGACCAATTTGGTTGGGGACGTGTCACAGAGGTTCGTAAGGATTTGGGTGTCTTTGTGGATACAGGCCTTCCTGACAA GGAAATCGTTGTGTCACTCGATATTCTCCCTGAGCTCAAGGAACTCTGGCCTAAGAAGGGCGACCAACTCTACATCCGTC TTGAAGTGGATAAGAAAGACCGTATCTGGGGCCTCTTGGCTTATCAAGAAGACTTCCAACGTCTTGCTCGTCCTGCCTAC AACAACATGCAGAACCAAAACTGGCCAGCCATTGTTTACCGTCTCAAGCTGTCAGGAACTTTTGTTTACCTACCAGAAAA TAATATGCTTGGTTTTATTCATCCTAGCGAGCGTTACGCAGAGCCACGTTTGGGGCAAGTATTAGATGCGCGCGTTATTG GTTTCCGTGAAGTGGACCGCACTCTGAACCTCTCCCTCAAACCACGCTCCTTTGAAATGTTGGAAAACGATGCTCAGATG ATTTTGACTTATTTGGAAAGTAATGGCGGTTTCATGACCTTAAATGATAAGTCATCTCCAGACGACATCAAGGCAACCTT TGGCATTTCTAAAGGTCAGTTCAAGAAAGCTTTAGGTGGTCTTATGAAGGCTGGTAAAATCAAGCAGGACCAGTTTGGGA CAGAGTTGATTTAG
Upstream 100 bases:
>100_bases TTCAAAAAGTAACAGACGATGCTGTTAAACACATCGACGACATGACTGCTAACAAAGAGAAAGAACTTTTGGAAGTCTAA AAATAAACAGAAAAACTCAG
Downstream 100 bases:
>100_bases GGAGGCTTATGAGAAAATCATTTTACACTTGGCTCATGACCGAGCGCAATCCTAAAAGTAACAGTCCCAAAGCAATTTTG GCAGACCTCGCTTTTGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MALLAEFYSKEGNMNTNLASFIVGLIIDENDRFYFVQKDGQTYALAKEEGQHTVGDTVKGFAYTDMKQKLRLTTLEVTAT QDQFGWGRVTEVRKDLGVFVDTGLPDKEIVVSLDILPELKELWPKKGDQLYIRLEVDKKDRIWGLLAYQEDFQRLARPAY NNMQNQNWPAIVYRLKLSGTFVYLPENNMLGFIHPSERYAEPRLGQVLDARVIGFREVDRTLNLSLKPRSFEMLENDAQM ILTYLESNGGFMTLNDKSSPDDIKATFGISKGQFKKALGGLMKAGKIKQDQFGTELI
Sequences:
>Translated_297_residues MALLAEFYSKEGNMNTNLASFIVGLIIDENDRFYFVQKDGQTYALAKEEGQHTVGDTVKGFAYTDMKQKLRLTTLEVTAT QDQFGWGRVTEVRKDLGVFVDTGLPDKEIVVSLDILPELKELWPKKGDQLYIRLEVDKKDRIWGLLAYQEDFQRLARPAY NNMQNQNWPAIVYRLKLSGTFVYLPENNMLGFIHPSERYAEPRLGQVLDARVIGFREVDRTLNLSLKPRSFEMLENDAQM ILTYLESNGGFMTLNDKSSPDDIKATFGISKGQFKKALGGLMKAGKIKQDQFGTELI >Mature_296_residues ALLAEFYSKEGNMNTNLASFIVGLIIDENDRFYFVQKDGQTYALAKEEGQHTVGDTVKGFAYTDMKQKLRLTTLEVTATQ DQFGWGRVTEVRKDLGVFVDTGLPDKEIVVSLDILPELKELWPKKGDQLYIRLEVDKKDRIWGLLAYQEDFQRLARPAYN NMQNQNWPAIVYRLKLSGTFVYLPENNMLGFIHPSERYAEPRLGQVLDARVIGFREVDRTLNLSLKPRSFEMLENDAQMI LTYLESNGGFMTLNDKSSPDDIKATFGISKGQFKKALGGLMKAGKIKQDQFGTELI
Specific function: Unknown
COG id: COG2996
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 S1 motif domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016027 - InterPro: IPR003029 - InterPro: IPR022967 - InterPro: IPR014464 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33874; Mature: 33743
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLAEFYSKEGNMNTNLASFIVGLIIDENDRFYFVQKDGQTYALAKEEGQHTVGDTVKG CCCHHHHHCCCCCCCCCHHHEEEEEEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCC FAYTDMKQKLRLTTLEVTATQDQFGWGRVTEVRKDLGVFVDTGLPDKEIVVSLDILPELK CEECCHHHCEEEEEEEEEECCCCCCCCHHHHHHHHCCEEEECCCCCCEEEEEEECCHHHH ELWPKKGDQLYIRLEVDKKDRIWGLLAYQEDFQRLARPAYNNMQNQNWPAIVYRLKLSGT HHCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCE FVYLPENNMLGFIHPSERYAEPRLGQVLDARVIGFREVDRTLNLSLKPRSFEMLENDAQM EEEEECCCEEEEECCHHHCCCCCHHHHHHHHHHCHHHHCCEEEEEECCCHHHHHHCCHHE ILTYLESNGGFMTLNDKSSPDDIKATFGISKGQFKKALGGLMKAGKIKQDQFGTELI EEEEEECCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ALLAEFYSKEGNMNTNLASFIVGLIIDENDRFYFVQKDGQTYALAKEEGQHTVGDTVKG CCHHHHHCCCCCCCCCHHHEEEEEEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCC FAYTDMKQKLRLTTLEVTATQDQFGWGRVTEVRKDLGVFVDTGLPDKEIVVSLDILPELK CEECCHHHCEEEEEEEEEECCCCCCCCHHHHHHHHCCEEEECCCCCCEEEEEEECCHHHH ELWPKKGDQLYIRLEVDKKDRIWGLLAYQEDFQRLARPAYNNMQNQNWPAIVYRLKLSGT HHCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCE FVYLPENNMLGFIHPSERYAEPRLGQVLDARVIGFREVDRTLNLSLKPRSFEMLENDAQM EEEEECCCEEEEECCHHHCCCCCHHHHHHHHHHCHHHHCCEEEEEECCCHHHHHHCCHHE ILTYLESNGGFMTLNDKSSPDDIKATFGISKGQFKKALGGLMKAGKIKQDQFGTELI EEEEEECCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353932; 9384377 [H]