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The map label for this gene is treC [H]

Identifier: 116515529

GI number: 116515529

Start: 1673821

End: 1675446

Strand: Reverse

Name: treC [H]

Synonym: SPD_1663

Alternate gene names: 116515529

Gene position: 1675446-1673821 (Counterclockwise)

Preceding gene: 116517080

Following gene: 116516372

Centisome position: 81.88

GC content: 41.51

Gene sequence:

>1626_bases
ATGACACTTGATAAAGGAAAAGTAGTCTATCAAATCTATCCAAAATCTTACAAAGACACCACTGAAAACGGTATTGGGGA
TTTCCGTGGGATTATCGAAAAAATTCCCTATTTAGCCAAACTAGGTGTGGATATGGTCTGGCTCAATCCATTCTATCCAA
GCCCTCAACGGGATAATGGTTACGATATTTCAGATTATATGGCAGTGGATCCTCTTTTTGGTGATATGGCTGATTTTGAG
GAAATGGTATGTGTTGGTAAAGAGCACAAGATTGACTTTATGCTGGACATGGTACTTAATCATTGTTCGACAGAGCATGA
ATGGTTTCAGAAAGCCCTAGCTGGTGATAAGTATTATCAAGACTTTTTCTTCATCCAAGACCAACCAACAGATTGGCAGT
CTAAGTTTGGTGGTTCTGCATGGGCGCCTTTCGGGGATACTGGGAAATACTATCTTCACCTATTTGATGAGACCCAGGCT
GACCTTAACTGGCGCAATCCCAATGTCCGTAAGGAGCTTTTCAAGGTTGTTAATTTCTGGCGCGACAAGGGTGTCAAAGG
TTTTCGATTTGATGTGATCAATTTGATCGGTAAGGACGAGGTTTCAGTGGACTGTCCTGAAAATGAAGGGAAGCCAGCTT
ATACAGACAAACCCATCGTTCATAACTATTTGCGTATGATGAACCAAGCCACTTTTGGATCTGACGATAGCTTTATGACA
GTTGGGGAAATGTCTTCTACCACCATGGAAAACTGTGTCCTTTATTCGTCGCCTGATCGTCAGGAATTATCCATGACCTT
TAATTTTCATCACCTCAAGGTGGACTATAAGGATGGACAAAAGTGGACCTTGGCTCCCTTTGATTTTGAAGAGTTGAAGA
GTCTTTACCATAGTTGGGGTAAGGAAATGAGTGATAAAGACGGTTGGAGTGCCCTCTTTTGGAACAATCACGATCAACCA
CGTGCCTTGAACCGTTTTGTCGATATTCAAAACTTCCGCAAGGAAGGAGCCACCATGCTAGCAGCCAGCATTCACCTGTC
ACGTGGGACACCTTATATCTACATGGGTGAGGAAATCGGGATGATTGACCCAGACTATGATTCTATGGCTGATTATGTGG
ATGTCGAATCGCTTAATGCCTATCAGATGCTCTTAGAAGAAGGAAAGAGTCAGCAAGAAGCCTTCCAGATTATTCAAGCT
AAGTCGCGTGATAATTCACGCATTCCCATGCAGTGGGATGCTTCGGAAAATGCAGGATTTTCAACAGGCACTCCTTGGTT
GAAAGCTGGTAAATCCTATAAATACATCAATGTAGAAAATGAAATCCAGGGTCCGATGTTTACCTTCTATCAAGACTTGA
TTCGACTGCGTAAGGAAATGCCAATCATTTCAGAAGGAAGTTACAAACCAGCCTTTGAAGATAGCAAACAAGTCTACGCT
TTTGAACGCCAGTTTGAGGATCAAAAGTTACTAGTGCTCAATAACTTTTATGCTAAAGAAGTGGAAATCGACTTGCCAGC
AGTCTACCAAAATGGACAGATTTTGATTTCAAACTATGAAGATGCAGAAGTGTCTGAGAAAATTCTACTAAAACCCTATC
AAACACTGGCTATTTATGTAAATTAA

Upstream 100 bases:

>100_bases
GCTTCCTAGTTTGCTCTTTGATTTTCATTGAGTATAATTGAAATAGCACAAATAGGGACGGAAGACTGCTTCCTCCCTTT
TATCAGAAAAGGAGAAACAG

Downstream 100 bases:

>100_bases
ACTTAGCAAGGAGACCTCTTTTTCAGAAAAGCAGGGTTCTTTTTGCTGTCTATTCCATCCTTGAAAGTGTAGAACAAACT
GGTCAGGGTGGCTAGTTTGT

Product: alpha,alpha-phosphotrehalase

Products: NA

Alternate protein names: Alpha,alpha-phosphotrehalase [H]

Number of amino acids: Translated: 541; Mature: 540

Protein sequence:

>541_residues
MTLDKGKVVYQIYPKSYKDTTENGIGDFRGIIEKIPYLAKLGVDMVWLNPFYPSPQRDNGYDISDYMAVDPLFGDMADFE
EMVCVGKEHKIDFMLDMVLNHCSTEHEWFQKALAGDKYYQDFFFIQDQPTDWQSKFGGSAWAPFGDTGKYYLHLFDETQA
DLNWRNPNVRKELFKVVNFWRDKGVKGFRFDVINLIGKDEVSVDCPENEGKPAYTDKPIVHNYLRMMNQATFGSDDSFMT
VGEMSSTTMENCVLYSSPDRQELSMTFNFHHLKVDYKDGQKWTLAPFDFEELKSLYHSWGKEMSDKDGWSALFWNNHDQP
RALNRFVDIQNFRKEGATMLAASIHLSRGTPYIYMGEEIGMIDPDYDSMADYVDVESLNAYQMLLEEGKSQQEAFQIIQA
KSRDNSRIPMQWDASENAGFSTGTPWLKAGKSYKYINVENEIQGPMFTFYQDLIRLRKEMPIISEGSYKPAFEDSKQVYA
FERQFEDQKLLVLNNFYAKEVEIDLPAVYQNGQILISNYEDAEVSEKILLKPYQTLAIYVN

Sequences:

>Translated_541_residues
MTLDKGKVVYQIYPKSYKDTTENGIGDFRGIIEKIPYLAKLGVDMVWLNPFYPSPQRDNGYDISDYMAVDPLFGDMADFE
EMVCVGKEHKIDFMLDMVLNHCSTEHEWFQKALAGDKYYQDFFFIQDQPTDWQSKFGGSAWAPFGDTGKYYLHLFDETQA
DLNWRNPNVRKELFKVVNFWRDKGVKGFRFDVINLIGKDEVSVDCPENEGKPAYTDKPIVHNYLRMMNQATFGSDDSFMT
VGEMSSTTMENCVLYSSPDRQELSMTFNFHHLKVDYKDGQKWTLAPFDFEELKSLYHSWGKEMSDKDGWSALFWNNHDQP
RALNRFVDIQNFRKEGATMLAASIHLSRGTPYIYMGEEIGMIDPDYDSMADYVDVESLNAYQMLLEEGKSQQEAFQIIQA
KSRDNSRIPMQWDASENAGFSTGTPWLKAGKSYKYINVENEIQGPMFTFYQDLIRLRKEMPIISEGSYKPAFEDSKQVYA
FERQFEDQKLLVLNNFYAKEVEIDLPAVYQNGQILISNYEDAEVSEKILLKPYQTLAIYVN
>Mature_540_residues
TLDKGKVVYQIYPKSYKDTTENGIGDFRGIIEKIPYLAKLGVDMVWLNPFYPSPQRDNGYDISDYMAVDPLFGDMADFEE
MVCVGKEHKIDFMLDMVLNHCSTEHEWFQKALAGDKYYQDFFFIQDQPTDWQSKFGGSAWAPFGDTGKYYLHLFDETQAD
LNWRNPNVRKELFKVVNFWRDKGVKGFRFDVINLIGKDEVSVDCPENEGKPAYTDKPIVHNYLRMMNQATFGSDDSFMTV
GEMSSTTMENCVLYSSPDRQELSMTFNFHHLKVDYKDGQKWTLAPFDFEELKSLYHSWGKEMSDKDGWSALFWNNHDQPR
ALNRFVDIQNFRKEGATMLAASIHLSRGTPYIYMGEEIGMIDPDYDSMADYVDVESLNAYQMLLEEGKSQQEAFQIIQAK
SRDNSRIPMQWDASENAGFSTGTPWLKAGKSYKYINVENEIQGPMFTFYQDLIRLRKEMPIISEGSYKPAFEDSKQVYAF
ERQFEDQKLLVLNNFYAKEVEIDLPAVYQNGQILISNYEDAEVSEKILLKPYQTLAIYVN

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=524, Percent_Identity=28.0534351145038, Blast_Score=188, Evalue=1e-47,
Organism=Escherichia coli, GI1790687, Length=537, Percent_Identity=47.1135940409683, Blast_Score=508, Evalue=1e-145,
Organism=Escherichia coli, GI1786604, Length=179, Percent_Identity=27.9329608938547, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI87081873, Length=160, Percent_Identity=30, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI32565753, Length=196, Percent_Identity=29.0816326530612, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI25147709, Length=197, Percent_Identity=28.4263959390863, Blast_Score=73, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6321726, Length=576, Percent_Identity=34.5486111111111, Blast_Score=307, Evalue=3e-84,
Organism=Saccharomyces cerevisiae, GI6322241, Length=576, Percent_Identity=34.5486111111111, Blast_Score=303, Evalue=4e-83,
Organism=Saccharomyces cerevisiae, GI6322021, Length=576, Percent_Identity=34.5486111111111, Blast_Score=303, Evalue=4e-83,
Organism=Saccharomyces cerevisiae, GI6324416, Length=576, Percent_Identity=34.5486111111111, Blast_Score=303, Evalue=6e-83,
Organism=Saccharomyces cerevisiae, GI6321731, Length=568, Percent_Identity=34.330985915493, Blast_Score=297, Evalue=3e-81,
Organism=Saccharomyces cerevisiae, GI6319776, Length=568, Percent_Identity=34.1549295774648, Blast_Score=295, Evalue=9e-81,
Organism=Saccharomyces cerevisiae, GI6322245, Length=562, Percent_Identity=31.8505338078292, Blast_Score=277, Evalue=3e-75,
Organism=Drosophila melanogaster, GI24586591, Length=567, Percent_Identity=32.9805996472663, Blast_Score=235, Evalue=7e-62,
Organism=Drosophila melanogaster, GI24586593, Length=530, Percent_Identity=32.0754716981132, Blast_Score=229, Evalue=3e-60,
Organism=Drosophila melanogaster, GI24583745, Length=579, Percent_Identity=30.2245250431779, Blast_Score=228, Evalue=6e-60,
Organism=Drosophila melanogaster, GI24583747, Length=537, Percent_Identity=33.147113594041, Blast_Score=228, Evalue=7e-60,
Organism=Drosophila melanogaster, GI24583749, Length=537, Percent_Identity=33.147113594041, Blast_Score=228, Evalue=9e-60,
Organism=Drosophila melanogaster, GI221330053, Length=585, Percent_Identity=30.5982905982906, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI45549022, Length=573, Percent_Identity=31.5881326352531, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24586589, Length=541, Percent_Identity=31.4232902033272, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24586599, Length=537, Percent_Identity=30.9124767225326, Blast_Score=218, Evalue=8e-57,
Organism=Drosophila melanogaster, GI24586597, Length=532, Percent_Identity=30.4511278195489, Blast_Score=210, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24586587, Length=583, Percent_Identity=26.4150943396226, Blast_Score=203, Evalue=3e-52,
Organism=Drosophila melanogaster, GI281360393, Length=482, Percent_Identity=30.2904564315353, Blast_Score=171, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR012769 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.93 [H]

Molecular weight: Translated: 62846; Mature: 62715

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDKGKVVYQIYPKSYKDTTENGIGDFRGIIEKIPYLAKLGVDMVWLNPFYPSPQRDNG
CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCEEEECCCCCCCCCCCC
YDISDYMAVDPLFGDMADFEEMVCVGKEHKIDFMLDMVLNHCSTEHEWFQKALAGDKYYQ
CCHHHHEEECCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEC
DFFFIQDQPTDWQSKFGGSAWAPFGDTGKYYLHLFDETQADLNWRNPNVRKELFKVVNFW
EEEEEECCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
RDKGVKGFRFDVINLIGKDEVSVDCPENEGKPAYTDKPIVHNYLRMMNQATFGSDDSFMT
HHCCCCCEEEHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEE
VGEMSSTTMENCVLYSSPDRQELSMTFNFHHLKVDYKDGQKWTLAPFDFEELKSLYHSWG
ECCCCCCCHHCEEEECCCCCCEEEEEEEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHC
KEMSDKDGWSALFWNNHDQPRALNRFVDIQNFRKEGATMLAASIHLSRGTPYIYMGEEIG
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCCC
MIDPDYDSMADYVDVESLNAYQMLLEEGKSQQEAFQIIQAKSRDNSRIPMQWDASENAGF
CCCCCHHHHHHHHCHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCC
STGTPWLKAGKSYKYINVENEIQGPMFTFYQDLIRLRKEMPIISEGSYKPAFEDSKQVYA
CCCCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEH
FERQFEDQKLLVLNNFYAKEVEIDLPAVYQNGQILISNYEDAEVSEKILLKPYQTLAIYV
HHHCCCCCEEEEEECCEEEEEEEECCEEECCCEEEEECCCCCHHHHHHHCCCCEEEEEEE
N
C
>Mature Secondary Structure 
TLDKGKVVYQIYPKSYKDTTENGIGDFRGIIEKIPYLAKLGVDMVWLNPFYPSPQRDNG
CCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCEEEECCCCCCCCCCCC
YDISDYMAVDPLFGDMADFEEMVCVGKEHKIDFMLDMVLNHCSTEHEWFQKALAGDKYYQ
CCHHHHEEECCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEC
DFFFIQDQPTDWQSKFGGSAWAPFGDTGKYYLHLFDETQADLNWRNPNVRKELFKVVNFW
EEEEEECCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
RDKGVKGFRFDVINLIGKDEVSVDCPENEGKPAYTDKPIVHNYLRMMNQATFGSDDSFMT
HHCCCCCEEEHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEE
VGEMSSTTMENCVLYSSPDRQELSMTFNFHHLKVDYKDGQKWTLAPFDFEELKSLYHSWG
ECCCCCCCHHCEEEECCCCCCEEEEEEEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHC
KEMSDKDGWSALFWNNHDQPRALNRFVDIQNFRKEGATMLAASIHLSRGTPYIYMGEEIG
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCCC
MIDPDYDSMADYVDVESLNAYQMLLEEGKSQQEAFQIIQAKSRDNSRIPMQWDASENAGF
CCCCCHHHHHHHHCHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCC
STGTPWLKAGKSYKYINVENEIQGPMFTFYQDLIRLRKEMPIISEGSYKPAFEDSKQVYA
CCCCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEH
FERQFEDQKLLVLNNFYAKEVEIDLPAVYQNGQILISNYEDAEVSEKILLKPYQTLAIYV
HHHCCCCCEEEEEECCEEEEEEEECCEEECCCEEEEECCCCCHHHHHHHCCCCEEEEEEE
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7651129; 8969503; 9384377; 7751281 [H]