| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116515485
Identifier: 116515485
GI number: 116515485
Start: 951339
End: 952121
Strand: Direct
Name: 116515485
Synonym: SPD_0942
Alternate gene names: NA
Gene position: 951339-952121 (Clockwise)
Preceding gene: 116516558
Following gene: 116517038
Centisome position: 46.49
GC content: 28.22
Gene sequence:
>783_bases ATGAAACAAATAATATTATCCACTGGAAGCACTAGTTCTCTAGGGTTAGATAATTTAGCAACTTTTGAAAAATTTACTAA AAATAAAGTATATGATTATGAAATTTTTTTCCAATCTAGATTGGAATTGACTGCTTCTGAAATAAAAAAAGTAAAAGAAT ATTGTAGCCAAAAGGGAGTAAGTGTTAATTCTATACATCCTTTTATGGAGGGATATGAGGTTCCAAATCTATTCTCTATA AATATAAAAAAGTATGCAGAAGCCAAAGATATATTCTACCGTTTTTTAGAGATATGCGTATTATTAAATTCAAAATATTT AATTATGCACGGCCCTTTACAAAATTGTGACTGGGATAATAGTATTGATAGAATAAAGTTTTTTATTTCTGAGGCTAAAA AGTATAATGTTGATATAGCTATTGAAAATAAAGACTATACACTTTTCTATTGTCCTAAGCGAATTATTCTCTTGAAAGAA CAGCTAGAAAGTGATAATTGGGGTTTTGTTCTAGATTTTAAGTCAGCTTGGAAAGCGAATATATCTTTAATAGATATGGT AGAGGCCATGGGTGATAGGTTATTATTTTCTCATGTTTCGTTTAGGGATTTAGAAAATCATAAATATGGAATTCCATTTC AGAAATTTGATAAAAGTGTATATGAAATTTTTTCATACATGAAGGAAAAATACAAGACTCCTAGATATGTTATTGAAGTT GATTTAGTAGAGAGTGAAATTGATATTATTCGGACAATTTCTCATGTAGAGGAGCTGTTATGA
Upstream 100 bases:
>100_bases TAAAGTTCAATCTGTCTTATTTGGTAAACATATAGGAGTAGATTATGCAGAGGGATTTATACTGATTAGACACATAGATA GAAAGTGTTAATGAGGAAGT
Downstream 100 bases:
>100_bases ATTTAAGGAAGAGAGTTAAGATATGAAAAAATGTTGGCTTACAACAAACTTTGAAGACTATCTAAAAGCATTAAGTACAA ACGAATTGACATTACTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MKQIILSTGSTSSLGLDNLATFEKFTKNKVYDYEIFFQSRLELTASEIKKVKEYCSQKGVSVNSIHPFMEGYEVPNLFSI NIKKYAEAKDIFYRFLEICVLLNSKYLIMHGPLQNCDWDNSIDRIKFFISEAKKYNVDIAIENKDYTLFYCPKRIILLKE QLESDNWGFVLDFKSAWKANISLIDMVEAMGDRLLFSHVSFRDLENHKYGIPFQKFDKSVYEIFSYMKEKYKTPRYVIEV DLVESEIDIIRTISHVEELL
Sequences:
>Translated_260_residues MKQIILSTGSTSSLGLDNLATFEKFTKNKVYDYEIFFQSRLELTASEIKKVKEYCSQKGVSVNSIHPFMEGYEVPNLFSI NIKKYAEAKDIFYRFLEICVLLNSKYLIMHGPLQNCDWDNSIDRIKFFISEAKKYNVDIAIENKDYTLFYCPKRIILLKE QLESDNWGFVLDFKSAWKANISLIDMVEAMGDRLLFSHVSFRDLENHKYGIPFQKFDKSVYEIFSYMKEKYKTPRYVIEV DLVESEIDIIRTISHVEELL >Mature_260_residues MKQIILSTGSTSSLGLDNLATFEKFTKNKVYDYEIFFQSRLELTASEIKKVKEYCSQKGVSVNSIHPFMEGYEVPNLFSI NIKKYAEAKDIFYRFLEICVLLNSKYLIMHGPLQNCDWDNSIDRIKFFISEAKKYNVDIAIENKDYTLFYCPKRIILLKE QLESDNWGFVLDFKSAWKANISLIDMVEAMGDRLLFSHVSFRDLENHKYGIPFQKFDKSVYEIFSYMKEKYKTPRYVIEV DLVESEIDIIRTISHVEELL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30624; Mature: 30624
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQIILSTGSTSSLGLDNLATFEKFTKNKVYDYEIFFQSRLELTASEIKKVKEYCSQKGV CCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCC SVNSIHPFMEGYEVPNLFSINIKKYAEAKDIFYRFLEICVLLNSKYLIMHGPLQNCDWDN CCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC SIDRIKFFISEAKKYNVDIAIENKDYTLFYCPKRIILLKEQLESDNWGFVLDFKSAWKAN CHHHHHHHHHHHHHEEEEEEEECCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCC ISLIDMVEAMGDRLLFSHVSFRDLENHKYGIPFQKFDKSVYEIFSYMKEKYKTPRYVIEV CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE DLVESEIDIIRTISHVEELL EEEHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKQIILSTGSTSSLGLDNLATFEKFTKNKVYDYEIFFQSRLELTASEIKKVKEYCSQKGV CCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCC SVNSIHPFMEGYEVPNLFSINIKKYAEAKDIFYRFLEICVLLNSKYLIMHGPLQNCDWDN CCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC SIDRIKFFISEAKKYNVDIAIENKDYTLFYCPKRIILLKEQLESDNWGFVLDFKSAWKAN CHHHHHHHHHHHHHEEEEEEEECCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCC ISLIDMVEAMGDRLLFSHVSFRDLENHKYGIPFQKFDKSVYEIFSYMKEKYKTPRYVIEV CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE DLVESEIDIIRTISHVEELL EEEHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA