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The map label for this gene is pcp

Identifier: 116515464

GI number: 116515464

Start: 765853

End: 766497

Strand: Direct

Name: pcp

Synonym: SPD_0753

Alternate gene names: 116515464

Gene position: 765853-766497 (Clockwise)

Preceding gene: 116517099

Following gene: 116516313

Centisome position: 37.43

GC content: 39.07

Gene sequence:

>645_bases
ATGAAAATATTGGTTACAGGTTTTAATCCTTTTGGAGGTGAAAAGATTAATCCAGCTTTGGAGGCTGTAAAATTATTACC
ATCTGAGATTAATGGGGCTGAAGTTCGCTGGGTAGAAATTCCAACGGTTTTTTATAAGTCGTCAGAAGTTTTAGAGGCAG
AAATATTACGATATCAACCAGATGCTGTACTTTGTATTGGACAAGCAGGCGGCAGGACCGGCTTAACACCTGAACGAGTG
GCTATTAATCAAGATGATGCTCGCATACCTGATAACGAAGGCAATCAACCAATTGATACACCGATTCGTATTGATGGAGC
ATCGGCCTATTTTAGTAGTTTACCTATCAAAGCGATGGTACAAGCTATCAAAAAACAGGGACTTCCGGCAGTTGTATCCA
ATAGTGCAGGAACCTTTGTTTGCAATCATTTGATGTACCAAGCTCTTTATTTAGTGGATAAAAAATTCCCTAATATGAGA
GCAGGTTTCATGCATATTCCATATATGATGGAACAAGTAGTAAATAAGCCGAATACTGCAGGAATGAGTCTATGTGATAT
TGTAAGAGGCATAGAGGTAGCTATTGAAGCTATTGTAGACTACAAAGATAAGGATTTGCAGTTAGTAGGCGGTGAGACTC
ACTGA

Upstream 100 bases:

>100_bases
AGAATGGCGTTATAAAGGCTCAAGCAGGTGTTGCTCTAGTAATGATTGTTATTCACATATTCTTAATGTACTTTCTCGCA
TTTTAGTAAAGGAAAATAAA

Downstream 100 bases:

>100_bases
TAACCTAAAAAGGATAGTCAATTATGCTTGTTTACTAACTATTAACTATGCTAAATCGATTGAGGTTGTTTACATAAAAC
TCTATATCAGAGAAGCCTGA

Product: pyrrolidone-carboxylate peptidase

Products: NA

Alternate protein names: 5-oxoprolyl-peptidase 1; Pyroglutamyl-peptidase I 1; PGP-I 1; Pyrase 1

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKILVTGFNPFGGEKINPALEAVKLLPSEINGAEVRWVEIPTVFYKSSEVLEAEILRYQPDAVLCIGQAGGRTGLTPERV
AINQDDARIPDNEGNQPIDTPIRIDGASAYFSSLPIKAMVQAIKKQGLPAVVSNSAGTFVCNHLMYQALYLVDKKFPNMR
AGFMHIPYMMEQVVNKPNTAGMSLCDIVRGIEVAIEAIVDYKDKDLQLVGGETH

Sequences:

>Translated_214_residues
MKILVTGFNPFGGEKINPALEAVKLLPSEINGAEVRWVEIPTVFYKSSEVLEAEILRYQPDAVLCIGQAGGRTGLTPERV
AINQDDARIPDNEGNQPIDTPIRIDGASAYFSSLPIKAMVQAIKKQGLPAVVSNSAGTFVCNHLMYQALYLVDKKFPNMR
AGFMHIPYMMEQVVNKPNTAGMSLCDIVRGIEVAIEAIVDYKDKDLQLVGGETH
>Mature_214_residues
MKILVTGFNPFGGEKINPALEAVKLLPSEINGAEVRWVEIPTVFYKSSEVLEAEILRYQPDAVLCIGQAGGRTGLTPERV
AINQDDARIPDNEGNQPIDTPIRIDGASAYFSSLPIKAMVQAIKKQGLPAVVSNSAGTFVCNHLMYQALYLVDKKFPNMR
AGFMHIPYMMEQVVNKPNTAGMSLCDIVRGIEVAIEAIVDYKDKDLQLVGGETH

Specific function: Removes 5-oxoproline from various penultimate amino acid residues except L-proline

COG id: COG2039

COG function: function code O; Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C15 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PCP1_STRPN (P65678)

Other databases:

- EMBL:   AE005672
- PIR:   C95099
- RefSeq:   NP_345348.1
- ProteinModelPortal:   P65678
- SMR:   P65678
- EnsemblBacteria:   EBSTRT00000026397
- GeneID:   930810
- GenomeReviews:   AE005672_GR
- KEGG:   spn:SP_0860
- TIGR:   SP_0860
- GeneTree:   EBGT00050000029708
- HOGENOM:   HBG360405
- OMA:   NTAGTYV
- ProtClustDB:   PRK13197
- BioCyc:   SPNE170187-1:SP_0860-MONOMER
- BRENDA:   3.4.19.3
- GO:   GO:0005737
- GO:   GO:0006508
- HAMAP:   MF_00417
- InterPro:   IPR000816
- InterPro:   IPR016125
- Gene3D:   G3DSA:3.40.630.20
- PANTHER:   PTHR23402
- PIRSF:   PIRSF015592
- PRINTS:   PR00706
- TIGRFAMs:   TIGR00504

Pfam domain/function: PF01470 Peptidase_C15; SSF53182 Peptidase_C15-like

EC number: =3.4.19.3

Molecular weight: Translated: 23420; Mature: 23420

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS01334 PYRASE_CYS; PS01333 PYRASE_GLU

Important sites: ACT_SITE 78-78 ACT_SITE 141-141 ACT_SITE 165-165

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVTGFNPFGGEKINPALEAVKLLPSEINGAEVRWVEIPTVFYKSSEVLEAEILRYQP
CEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECEEEECCCHHHHHHHHHCCC
DAVLCIGQAGGRTGLTPERVAINQDDARIPDNEGNQPIDTPIRIDGASAYFSSLPIKAMV
CEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCHHHHH
QAIKKQGLPAVVSNSAGTFVCNHLMYQALYLVDKKFPNMRAGFMHIPYMMEQVVNKPNTA
HHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCC
GMSLCDIVRGIEVAIEAIVDYKDKDLQLVGGETH
CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
>Mature Secondary Structure
MKILVTGFNPFGGEKINPALEAVKLLPSEINGAEVRWVEIPTVFYKSSEVLEAEILRYQP
CEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECEEEECCCHHHHHHHHHCCC
DAVLCIGQAGGRTGLTPERVAINQDDARIPDNEGNQPIDTPIRIDGASAYFSSLPIKAMV
CEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCHHHHH
QAIKKQGLPAVVSNSAGTFVCNHLMYQALYLVDKKFPNMRAGFMHIPYMMEQVVNKPNTA
HHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCC
GMSLCDIVRGIEVAIEAIVDYKDKDLQLVGGETH
CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916