| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116515430
Identifier: 116515430
GI number: 116515430
Start: 620134
End: 622155
Strand: Direct
Name: 116515430
Synonym: SPD_0596
Alternate gene names: NA
Gene position: 620134-622155 (Clockwise)
Preceding gene: 116516306
Following gene: 116516538
Centisome position: 30.31
GC content: 37.69
Gene sequence:
>2022_bases ATGAAGAAACTATTCATATTATTATCAACTTTTTTTCTCAGCTTCTTCCTTGCTTGGATTATTGTCTTACGTGCGCCACA ATATTTATATGCAAGCTATGATTCCGTTTCTTTACTTCGTGTCAAAAAAGATACTCAGGAACCGACGCGTGAGGTATTTG AACAGGAATTGGAGAATTTTGCAAACTCAGAACAGAGTTTAATAGCTAGAAGAATTGTAGAGCCGAGTAAGGATGGGACG ACTCACTTTACTTATGCAACTTATGGTCAGGGAACTTTACCAAAAGAATTCCAAGAAGCTAGCCAAGAAAGTCGTGAACG TAGTGATCCGCTAAATAGTTATCTCCTTTTGTCAGGCTCCTTGACGAAAGAAAAGCTTGCCGATAAATTAGGAGATTTGG GTTATAAAGCAAGTGCTGACCGAAAGATACCGCCCTATTTTCTTGCTTTTCGAATATTACTAAATCCCCTTATTTTAATT AGTTTAGCAATATTTGGCTTATCTTTCTTTGCTTTAGTGATTATCACTCGGATTAAGGAAATGAGAGCAGCAGGTATAAA ACTCTTTTCTGGTCAGACTCTCTTATCCATCATGGGGCATTCTTTATCTACTGATATCAAATGGCTCCTTCTATCAGCCC TCCTTTCCTTCCTAGGTGGGGGTGTCGTTCTTTTTAGTCAAGGTTTGTTTTATCCTATCTTGTTAGCCACCTATGGTTTT GGGATTAGTTTCTATCTGTTGTTTTTATTGGCGATTTCAATTTTACTAATGCTTCTTTATCTAATGAGTTTGAATTACAA AGCATTAGTTCCCGTTATTAAGGGGAGATTACCCCTTAAACGCCTGATGATTTTAACCCTATTGTGTCAGTTAGTAGCTG TTTTTACAGTAGGATACGCTGTTAAGACAGGTTTGACGTCTTACCAACGATTGAAAGAACTTGAAATTTCAAAACAAGCA TGGCAGGATAGAGCAGACTATTATCAAATTTCTTTTGGCTTAGGTGATAGAGGAAAAGATACAGAAAATCAGAGCAAGTG GTATGCCTTTGCCAAGGAAGCAATCGAAGAAGAACAAGCTCTTTATGTAAAGGATAATCTGCTCCATTTTGCCAATCCAC AAGGAAAAAATGAACAGGGAGAGACACTGGATACCTATAGTCCAGATGCTAATACGCTCTATGTTAGTCCCAGTTATTTG GACAAGGAAAAGGTCGTGGTAGATGCTGAGACCAAACAGAAGTTAGCCCATCTCCAAAAAGGTGAGTTTATCCTCTTGCT CCCAGAACATTTGCGCTCTCGAGAAGCAGAACTTAAGAAAGTTTTTGAAGAAAGATTGAGTTATTATGGAAAATCTGGTG AGGAGGCAAGTGCTCCTTTGGATTATGAGATGAAAGCGCACGTTAGTTATCTTTCAATGGGAGAAAAGCGGTTTGTTTAT AATAACGGTGAGAATCCCGTATCTACTCAGTATTTGACTGATCCGATTTTAGTTGTATTCACGCCGACTTCTACAGGTGA TAGTTTTATATCCTTATCTAGTTGGTCTATCAATGCTGGAAAACAACTCTTTATCAAAGGATATGAGAGTGGGCTAGAAC TCTTGAAGAAAGCTGGAATTTATGAGCAAGTATCCTATCTTAAAGAAGGAAGAAGTGTTTATCTAACTCGTTATAATGAA GTTCAAACTGAAACAGCAACTTTAATCTTAGGAGCTATTGTGGGGATAGCTAGTTCCTTGTTACTCTTTTATTCTGTCAA TCTTCTATATTTCGAGCAATTCCGCCGAGATATCTTGATTAAACGAATTTCAGGTTTACGATTTTTTGAAACACATGCTC AGTATATGGTTAGTCAATTTGCCAGTTTTGTATTTGGTGCTAGTCTCTTTATTTTAAGCAGTCGAGACTTGGTGATTGGC TTGCTCACTTTATTAGTCTTTCTAGCTAGTGCAGTTTTGACGCTTTACCGTCAAGCGCAGAAAGAATCTCGTGTTTCTAT GACAATTATGAAAGGAAAATAG
Upstream 100 bases:
>100_bases CAAGTAGCATTTTACTATGACTATGACTAATATTTAGTTTTCTTAGATAATTCCCCTTGTAAGAAATTACAGGGGGAATT TTGTTTACAAGGAGTCTACT
Downstream 100 bases:
>100_bases GATGATTGAACTAAAGAATATATCTAAAAAATTTGGAAGCCGTCAGCTATTTTCAGATACGAATCTTCATTTTGAAGGTG GGAAAATTTATGCCTTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: Lactococcin; Immunity Protein; Bacteriocine Associated ABC Transporter Permease; Bacteriocin-Associated Membrane Protein
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MKKLFILLSTFFLSFFLAWIIVLRAPQYLYASYDSVSLLRVKKDTQEPTREVFEQELENFANSEQSLIARRIVEPSKDGT THFTYATYGQGTLPKEFQEASQESRERSDPLNSYLLLSGSLTKEKLADKLGDLGYKASADRKIPPYFLAFRILLNPLILI SLAIFGLSFFALVIITRIKEMRAAGIKLFSGQTLLSIMGHSLSTDIKWLLLSALLSFLGGGVVLFSQGLFYPILLATYGF GISFYLLFLLAISILLMLLYLMSLNYKALVPVIKGRLPLKRLMILTLLCQLVAVFTVGYAVKTGLTSYQRLKELEISKQA WQDRADYYQISFGLGDRGKDTENQSKWYAFAKEAIEEEQALYVKDNLLHFANPQGKNEQGETLDTYSPDANTLYVSPSYL DKEKVVVDAETKQKLAHLQKGEFILLLPEHLRSREAELKKVFEERLSYYGKSGEEASAPLDYEMKAHVSYLSMGEKRFVY NNGENPVSTQYLTDPILVVFTPTSTGDSFISLSSWSINAGKQLFIKGYESGLELLKKAGIYEQVSYLKEGRSVYLTRYNE VQTETATLILGAIVGIASSLLLFYSVNLLYFEQFRRDILIKRISGLRFFETHAQYMVSQFASFVFGASLFILSSRDLVIG LLTLLVFLASAVLTLYRQAQKESRVSMTIMKGK
Sequences:
>Translated_673_residues MKKLFILLSTFFLSFFLAWIIVLRAPQYLYASYDSVSLLRVKKDTQEPTREVFEQELENFANSEQSLIARRIVEPSKDGT THFTYATYGQGTLPKEFQEASQESRERSDPLNSYLLLSGSLTKEKLADKLGDLGYKASADRKIPPYFLAFRILLNPLILI SLAIFGLSFFALVIITRIKEMRAAGIKLFSGQTLLSIMGHSLSTDIKWLLLSALLSFLGGGVVLFSQGLFYPILLATYGF GISFYLLFLLAISILLMLLYLMSLNYKALVPVIKGRLPLKRLMILTLLCQLVAVFTVGYAVKTGLTSYQRLKELEISKQA WQDRADYYQISFGLGDRGKDTENQSKWYAFAKEAIEEEQALYVKDNLLHFANPQGKNEQGETLDTYSPDANTLYVSPSYL DKEKVVVDAETKQKLAHLQKGEFILLLPEHLRSREAELKKVFEERLSYYGKSGEEASAPLDYEMKAHVSYLSMGEKRFVY NNGENPVSTQYLTDPILVVFTPTSTGDSFISLSSWSINAGKQLFIKGYESGLELLKKAGIYEQVSYLKEGRSVYLTRYNE VQTETATLILGAIVGIASSLLLFYSVNLLYFEQFRRDILIKRISGLRFFETHAQYMVSQFASFVFGASLFILSSRDLVIG LLTLLVFLASAVLTLYRQAQKESRVSMTIMKGK >Mature_673_residues MKKLFILLSTFFLSFFLAWIIVLRAPQYLYASYDSVSLLRVKKDTQEPTREVFEQELENFANSEQSLIARRIVEPSKDGT THFTYATYGQGTLPKEFQEASQESRERSDPLNSYLLLSGSLTKEKLADKLGDLGYKASADRKIPPYFLAFRILLNPLILI SLAIFGLSFFALVIITRIKEMRAAGIKLFSGQTLLSIMGHSLSTDIKWLLLSALLSFLGGGVVLFSQGLFYPILLATYGF GISFYLLFLLAISILLMLLYLMSLNYKALVPVIKGRLPLKRLMILTLLCQLVAVFTVGYAVKTGLTSYQRLKELEISKQA WQDRADYYQISFGLGDRGKDTENQSKWYAFAKEAIEEEQALYVKDNLLHFANPQGKNEQGETLDTYSPDANTLYVSPSYL DKEKVVVDAETKQKLAHLQKGEFILLLPEHLRSREAELKKVFEERLSYYGKSGEEASAPLDYEMKAHVSYLSMGEKRFVY NNGENPVSTQYLTDPILVVFTPTSTGDSFISLSSWSINAGKQLFIKGYESGLELLKKAGIYEQVSYLKEGRSVYLTRYNE VQTETATLILGAIVGIASSLLLFYSVNLLYFEQFRRDILIKRISGLRFFETHAQYMVSQFASFVFGASLFILSSRDLVIG LLTLLVFLASAVLTLYRQAQKESRVSMTIMKGK
Specific function: Unknown
COG id: COG4652
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76159; Mature: 76159
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFILLSTFFLSFFLAWIIVLRAPQYLYASYDSVSLLRVKKDTQEPTREVFEQELENF CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEHHCCCHHHHHHHHHHHHHH ANSEQSLIARRIVEPSKDGTTHFTYATYGQGTLPKEFQEASQESRERSDPLNSYLLLSGS HCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECC LTKEKLADKLGDLGYKASADRKIPPYFLAFRILLNPLILISLAIFGLSFFALVIITRIKE CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRAAGIKLFSGQTLLSIMGHSLSTDIKWLLLSALLSFLGGGVVLFSQGLFYPILLATYGF HHHHCCEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHH GISFYLLFLLAISILLMLLYLMSLNYKALVPVIKGRLPLKRLMILTLLCQLVAVFTVGYA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH VKTGLTSYQRLKELEISKQAWQDRADYYQISFGLGDRGKDTENQSKWYAFAKEAIEEEQA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH LYVKDNLLHFANPQGKNEQGETLDTYSPDANTLYVSPSYLDKEKVVVDAETKQKLAHLQK EEHHHCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECHHHHHHHHHCC GEFILLLPEHLRSREAELKKVFEERLSYYGKSGEEASAPLDYEMKAHVSYLSMGEKRFVY CCEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE NNGENPVSTQYLTDPILVVFTPTSTGDSFISLSSWSINAGKQLFIKGYESGLELLKKAGI ECCCCCCCCCEECCCEEEEEECCCCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCH YEQVSYLKEGRSVYLTRYNEVQTETATLILGAIVGIASSLLLFYSVNLLYFEQFRRDILI HHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRISGLRFFETHAQYMVSQFASFVFGASLFILSSRDLVIGLLTLLVFLASAVLTLYRQAQ HHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH KESRVSMTIMKGK HHCCEEEEEECCC >Mature Secondary Structure MKKLFILLSTFFLSFFLAWIIVLRAPQYLYASYDSVSLLRVKKDTQEPTREVFEQELENF CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEHHCCCHHHHHHHHHHHHHH ANSEQSLIARRIVEPSKDGTTHFTYATYGQGTLPKEFQEASQESRERSDPLNSYLLLSGS HCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECC LTKEKLADKLGDLGYKASADRKIPPYFLAFRILLNPLILISLAIFGLSFFALVIITRIKE CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRAAGIKLFSGQTLLSIMGHSLSTDIKWLLLSALLSFLGGGVVLFSQGLFYPILLATYGF HHHHCCEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHH GISFYLLFLLAISILLMLLYLMSLNYKALVPVIKGRLPLKRLMILTLLCQLVAVFTVGYA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH VKTGLTSYQRLKELEISKQAWQDRADYYQISFGLGDRGKDTENQSKWYAFAKEAIEEEQA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH LYVKDNLLHFANPQGKNEQGETLDTYSPDANTLYVSPSYLDKEKVVVDAETKQKLAHLQK EEHHHCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECHHHHHHHHHCC GEFILLLPEHLRSREAELKKVFEERLSYYGKSGEEASAPLDYEMKAHVSYLSMGEKRFVY CCEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE NNGENPVSTQYLTDPILVVFTPTSTGDSFISLSSWSINAGKQLFIKGYESGLELLKKAGI ECCCCCCCCCEECCCEEEEEECCCCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCH YEQVSYLKEGRSVYLTRYNEVQTETATLILGAIVGIASSLLLFYSVNLLYFEQFRRDILI HHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRISGLRFFETHAQYMVSQFASFVFGASLFILSSRDLVIGLLTLLVFLASAVLTLYRQAQ HHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH KESRVSMTIMKGK HHCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA