Definition | Lactococcus lactis subsp. cremoris SK11, complete genome. |
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Accession | NC_008527 |
Length | 2,438,589 |
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Identifier: 116511138
GI number:
Start: 294757
End: 296442
Strand: Reverse
Name: Not Available
Synonym: LACR_0324
Alternate gene names: NA
Gene position: NA
Preceding gene: 229269518
Following gene: 116511137
Centisome position: NA
GC content: NA
Gene sequence:
>1686_bases ATGCCAAAACAACTTAAAATAAAAGCTGATGAAGTCGCAGTTTACGCCATTGGCGGACTGGGCGAAATCGGTAAAAACAC TTATGGCGTTGAATATAAAGATGAAATCATCATCATCGACGCCGGAATTAAATTCCCAGAAGACGATTTATTAGGTGTTG ACTACGTCATCCCTGATTACACTTATATTGTTGAAAATATCGACCGGATTAAAGGGCTCTTCATTACTCACGGACACGAA GACCATATCGGAGGAATTCCTTTCCTTTTGAAACAAGCCAATATCCCTATTTATGCTGGGCCATTGTCACTTGCACTCAT CCGTGGAAAGCTCGAAGAACACGGGCTTTTACGTGATGCTAAACTCTACGAAATCCACGCCGATTCAGTCATTAAATTTA ATCACTTGAGTCTTGATTTCTTCCGCACCACTCACTCAATTCCAGAACCTTTAGGAATTGTTGTAAATACCCCTCAAGGT AAAATTGTAGCGACCGGTGACTTCAAGTTTGACTTCACACCAGTGGGTGAACCTGCTGATCTACATCGGATGGCTGAACT TGGTAGCGAAGGTGTCTTACTCCTTCTTTCTGATTCAACCAATGCTGAAATTCCAACTTTTTCACATTCTGAAAAAGTCG TTGGTGCAAGCATCATGAAAATTTTTGAACGTATTGAAGGTCGGATTATTTTCGCTTCTTTTGCCTCAAATATTTTCCGT TTGCAACAAGCCGTTGATGGAGCAGTTAAGACTGGGCGTAAAATCGTTGTCTTTGGTCGTTCAATGGAAAAAGCCATTGT TAACGGTTTAGAACTTGGTTATATCAAAGCGCCTAAGGGCACATTTATCGAACCAAATGAAGTCAATCAATATGCTTCAC ATGAACTTTTGATTATGTGTACAGGTTCGCAAGGCGAACCAATGGCTGCACTTTCAAGAATTGCCAATGGCATGCACCGT CATATTACCCTACAAATGGGCGATACCGTTGTCTTCTCATCAAATGCGATTCCTGGAAATACTCATGGTGTTAACCAATT GATTAACAAAATCGCTGAAGCTGGAGTTGAAGTCATTTATGGTAAGATGAACAACATTCACACTTCAGGTCACGGTGGAC AACAAGAACAAAAACTCATGTTGCGTCTTATCAAACCAAAATACTTTATGCCTGTCCACGGTGAGTATCGTATGCTCAAA ATTCATGCTGGACTTGCTCAAGATACTGGTGTCCCTAAAGAAAATTGTTTCATTCAAGAAAACGGAGATGTCCTTGCACT GACTGCTGACAGCGCCAGATATGCTGACCATTTCCCGGCTGCCGATACTTATGTTGACGGTTCAGGAATTGGAGATGTCG GAAATGCCGTTCTCCATGACCGTCATGAACTTTCAGAAGACGGAATCGTTCTTGCAGTGGCAACCGTTGACTTTAAAAAG AAAACCGTTCTTGCTGGACCTGATATGCTCTCACGTGGATTCATTTACATGCGTGAGTCTGGTGATTTGATTCGTAGTGG CCAACGTGTCCTTTTCAATGCTATACGTGAAGCCATGCATGAAGAAAATGCTAATGAAGCGTCTGTAGCACGTGCGATGC GTGAAGCACTCTCACCATTCCTTTATAAACAAACTGAGCGCTCACCACTTGTTGTTCCAATGATTATGACACCTGATGAA AAATAA
Upstream 100 bases:
>100_bases CAGTCTGTATTCAGTCCTGTCAACAAATTTTTAACTCTTGATACTTAACTGACCCATTGTCAGTAAAAATAACTAATAAA ATCCAAAGAATAGGAGAAAC
Downstream 100 bases:
>100_bases AAAATTACTGACAGAACCAAATTCTTATTAGAATGGAAGTCTGTCAGTATTTTTTTATTCAAAATAATCTTTTTTCTTGA CTTAAACCTGGTTTAAGCTG
Product: mRNA degradation ribonuclease J1/J2enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>561_residues MPKQLKIKADEVAVYAIGGLGEIGKNTYGVEYKDEIIIIDAGIKFPEDDLLGVDYVIPDYTYIVENIDRIKGLFITHGHE DHIGGIPFLLKQANIPIYAGPLSLALIRGKLEEHGLLRDAKLYEIHADSVIKFNHLSLDFFRTTHSIPEPLGIVVNTPQG KIVATGDFKFDFTPVGEPADLHRMAELGSEGVLLLLSDSTNAEIPTFSHSEKVVGASIMKIFERIEGRIIFASFASNIFR LQQAVDGAVKTGRKIVVFGRSMEKAIVNGLELGYIKAPKGTFIEPNEVNQYASHELLIMCTGSQGEPMAALSRIANGMHR HITLQMGDTVVFSSNAIPGNTHGVNQLINKIAEAGVEVIYGKMNNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMLK IHAGLAQDTGVPKENCFIQENGDVLALTADSARYADHFPAADTYVDGSGIGDVGNAVLHDRHELSEDGIVLAVATVDFKK KTVLAGPDMLSRGFIYMRESGDLIRSGQRVLFNAIREAMHEENANEASVARAMREALSPFLYKQTERSPLVVPMIMTPDE K
Sequences:
NA
Specific function: NA
COG id: COG0595
COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA