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The map label for this gene is 116494321

Identifier: 116494321

GI number: 116494321

Start: 772249

End: 772893

Strand: Direct

Name: 116494321

Synonym: LSEI_0777

Alternate gene names: NA

Gene position: 772249-772893 (Clockwise)

Preceding gene: 116494320

Following gene: 116494322

Centisome position: 26.67

GC content: 47.13

Gene sequence:

>645_bases
ATGACACCGAATAAAGAGGATTATCTTAAATTGATTTTTGAGATTGGCGGCGATACACAGCTGGTCTCTAATAAACGAAT
CGTTGCCGGTATGCATGTTTCTGCTGCTTCGGTCAGTGAGATGATCAACAAACTGGGCGAAGAAAAACTGGTTGCGCACA
CGCCTTATCAAGGTATCCAGCTGACATCAGCTGGCCGGAAAAAGGCGGCCATTTTGGTGCGTAATCATCGGCTCTGGGAA
GTATTTCTGGTTCAGTGCCTTAAATATCCAGCTGATGCGGTCCATCAAGAAGCAGAAAAACTGGAACATGCCTTAACGCC
GGAAATGGCCAAACGGTTGTCAGCCATGTTGGGCGAACCTCGCTATTGTCCGCACGGCGGTGTTATTCCGGATGCCAATG
GCCACTATCTCCAACAAAGTCGGGTGACATTAGGCACGTTAGATGTTGGGCAAAGTGGGCATATTGAACGCGTGATTGAT
GAAGTTTCGTTGATTGATTACACGGTTAAAATTGACCTGCGGCTGGATGATGAATTCACGGTGACTGCGAAAACCTTAGA
TGCCGTGATCATCAAGTTAGCCCGTACCGGAAAAGAATTGGCGGTCGATGCAGATCGTGCTGATCACATTTTTGTCGAAT
TGTAA

Upstream 100 bases:

>100_bases
GCCGATCACAAAAAAACACGTCAGTAAATTGGCGTGTTTTTTTGTGTGACTCATGGCATAATGGAGTACAGTGACTGCAA
ATTAAAAGTAAGGATGTAAA

Downstream 100 bases:

>100_bases
TTAAGTCTAGAGAAAGCAGGGTCGTATACATGCCAGAAGAGTCACGTGCTGTGATTATTATTTTTGGAGGTTCAGGAGAT
CTAGCCTCACGCAAGTTGTA

Product: Mn-dependent transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTPNKEDYLKLIFEIGGDTQLVSNKRIVAGMHVSAASVSEMINKLGEEKLVAHTPYQGIQLTSAGRKKAAILVRNHRLWE
VFLVQCLKYPADAVHQEAEKLEHALTPEMAKRLSAMLGEPRYCPHGGVIPDANGHYLQQSRVTLGTLDVGQSGHIERVID
EVSLIDYTVKIDLRLDDEFTVTAKTLDAVIIKLARTGKELAVDADRADHIFVEL

Sequences:

>Translated_214_residues
MTPNKEDYLKLIFEIGGDTQLVSNKRIVAGMHVSAASVSEMINKLGEEKLVAHTPYQGIQLTSAGRKKAAILVRNHRLWE
VFLVQCLKYPADAVHQEAEKLEHALTPEMAKRLSAMLGEPRYCPHGGVIPDANGHYLQQSRVTLGTLDVGQSGHIERVID
EVSLIDYTVKIDLRLDDEFTVTAKTLDAVIIKLARTGKELAVDADRADHIFVEL
>Mature_213_residues
TPNKEDYLKLIFEIGGDTQLVSNKRIVAGMHVSAASVSEMINKLGEEKLVAHTPYQGIQLTSAGRKKAAILVRNHRLWEV
FLVQCLKYPADAVHQEAEKLEHALTPEMAKRLSAMLGEPRYCPHGGVIPDANGHYLQQSRVTLGTLDVGQSGHIERVIDE
VSLIDYTVKIDLRLDDEFTVTAKTLDAVIIKLARTGKELAVDADRADHIFVEL

Specific function: Part of an ATP-driven transport system CPn_0346/CPn_0347/CPn_0348/CPn_0349 for a metal [H]

COG id: COG1321

COG function: function code K; Mn-dependent transcriptional regulator

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626
- InterPro:   IPR001367
- InterPro:   IPR022689
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00950 ABC-3; PF02742 Fe_dep_repr_C [H]

EC number: NA

Molecular weight: Translated: 23735; Mature: 23603

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS50944 HTH_DTXR ; PS00732 RIBOSOMAL_S16

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPNKEDYLKLIFEIGGDTQLVSNKRIVAGMHVSAASVSEMINKLGEEKLVAHTPYQGIQ
CCCCHHHHHHHHHHCCCCEEEECCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCEE
LTSAGRKKAAILVRNHRLWEVFLVQCLKYPADAVHQEAEKLEHALTPEMAKRLSAMLGEP
EECCCCCEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
RYCPHGGVIPDANGHYLQQSRVTLGTLDVGQSGHIERVIDEVSLIDYTVKIDLRLDDEFT
CCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHEEEEEEEEEEECCCEE
VTAKTLDAVIIKLARTGKELAVDADRADHIFVEL
EHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEC
>Mature Secondary Structure 
TPNKEDYLKLIFEIGGDTQLVSNKRIVAGMHVSAASVSEMINKLGEEKLVAHTPYQGIQ
CCCHHHHHHHHHHCCCCEEEECCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCEE
LTSAGRKKAAILVRNHRLWEVFLVQCLKYPADAVHQEAEKLEHALTPEMAKRLSAMLGEP
EECCCCCEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
RYCPHGGVIPDANGHYLQQSRVTLGTLDVGQSGHIERVIDEVSLIDYTVKIDLRLDDEFT
CCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHEEEEEEEEEEECCCEE
VTAKTLDAVIIKLARTGKELAVDADRADHIFVEL
EHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]