| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494304
Identifier: 116494304
GI number: 116494304
Start: 756430
End: 757275
Strand: Direct
Name: 116494304
Synonym: LSEI_0760
Alternate gene names: NA
Gene position: 756430-757275 (Clockwise)
Preceding gene: 116494303
Following gene: 116494308
Centisome position: 26.13
GC content: 47.87
Gene sequence:
>846_bases ATGAAACTAAAACGCTGGGTTGTTATCGTATTTGCGGCGGTTGTGGTTATCGCTGGAGCGGGTTGGTACTGGTATCAGGA ACAACCCACCGATACACCGACGACAGAGAAAACGACGATTGGTCAAACCGCAACGCTATACTTGCATGGCTATTCAGGGG GTGCTGGCTCGACTAATACCTTGATTCGACATGCTGAGCAGTCTGGCGCAACTAAGGTGCTCACGGCCACTGTCGCTAAA AATGGTAAAGTTAGCTGGCAAGGGAATGCACGGCATGTCAGCAAGCCGATTGTTCAGGTGATTTTTCAGGATAATGTCAA TCCGGATTACGCCAAGCTAGCGGGTTGGTTGACGACCATTAATCGCGAACTTTATCAACGTTACGGCGTTCGCCAGGTCA ACTTTGTGGCCCATTCGATGGGCAATATGGCAGTGATGTTCTATGCAACTCAAAACTCAGATCACCCTAAATTGCCAAAA ATGCGGGCTTACGTGGCGATTGCTGGCCATTTTGACGGTATTATCGGCATGGGCGATGAGCCTCATCGTATTAAACTTGC TCCAAACGGTTATCCGACGCCGCCGGATGAGAATTATGCCACGTTAGCCAGAATGCGCGATCGTTTTCCAAAAAATGTAA AGGTTTTGAATATTTATGGCGATGTGGATGATGGTTCAGACTCAGACGGTCGTGTCGCAAACAATTCATCGCGCTCATTG CAGTACTTAGTTGAAGGGCGCGCCGCCAGTTATCAAGAAAAAGAATTTGTTGGCAAAAAAGCGCAGCATAGTGCGCTTCA TGAAAATCCGCAGGTGGCTAAGGCGGTTGATAATTTTATTTGGTGA
Upstream 100 bases:
>100_bases GGACGATTATCATCGGTTTGCTTGTTGCGGGTGTGAGCCACTTTTTCCCGCGCGCTCAGGCTGAGGACGATGACTTATTA ACGGCTGAAAGGAGTGCTTT
Downstream 100 bases:
>100_bases GGGCATGCGCTAGTTTTTGTTAGGGTCGTACGGCGTGACAACGACTTTGCCACTAAGATAGTTGGCCATGTAAACGTCGC CAGTTTCATAGCCTTGCTCC
Product: alpha/beta hydrolase superfamily protein
Products: NA
Alternate protein names: Cell Surface Hydrolase; Cell Surface Hydrolase Membrane-Bound; Lipase/Esterase; Extracellular Lipase/Esterase; Cell Surface Hydrolas; Secreted Protein; Lipoprotein
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKLKRWVVIVFAAVVVIAGAGWYWYQEQPTDTPTTEKTTIGQTATLYLHGYSGGAGSTNTLIRHAEQSGATKVLTATVAK NGKVSWQGNARHVSKPIVQVIFQDNVNPDYAKLAGWLTTINRELYQRYGVRQVNFVAHSMGNMAVMFYATQNSDHPKLPK MRAYVAIAGHFDGIIGMGDEPHRIKLAPNGYPTPPDENYATLARMRDRFPKNVKVLNIYGDVDDGSDSDGRVANNSSRSL QYLVEGRAASYQEKEFVGKKAQHSALHENPQVAKAVDNFIW
Sequences:
>Translated_281_residues MKLKRWVVIVFAAVVVIAGAGWYWYQEQPTDTPTTEKTTIGQTATLYLHGYSGGAGSTNTLIRHAEQSGATKVLTATVAK NGKVSWQGNARHVSKPIVQVIFQDNVNPDYAKLAGWLTTINRELYQRYGVRQVNFVAHSMGNMAVMFYATQNSDHPKLPK MRAYVAIAGHFDGIIGMGDEPHRIKLAPNGYPTPPDENYATLARMRDRFPKNVKVLNIYGDVDDGSDSDGRVANNSSRSL QYLVEGRAASYQEKEFVGKKAQHSALHENPQVAKAVDNFIW >Mature_281_residues MKLKRWVVIVFAAVVVIAGAGWYWYQEQPTDTPTTEKTTIGQTATLYLHGYSGGAGSTNTLIRHAEQSGATKVLTATVAK NGKVSWQGNARHVSKPIVQVIFQDNVNPDYAKLAGWLTTINRELYQRYGVRQVNFVAHSMGNMAVMFYATQNSDHPKLPK MRAYVAIAGHFDGIIGMGDEPHRIKLAPNGYPTPPDENYATLARMRDRFPKNVKVLNIYGDVDDGSDSDGRVANNSSRSL QYLVEGRAASYQEKEFVGKKAQHSALHENPQVAKAVDNFIW
Specific function: Unknown
COG id: COG4814
COG function: function code R; Uncharacterized protein with an alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31173; Mature: 31173
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKRWVVIVFAAVVVIAGAGWYWYQEQPTDTPTTEKTTIGQTATLYLHGYSGGAGSTNT CCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEECCCEEEEEEEECCCCCCCHHH LIRHAEQSGATKVLTATVAKNGKVSWQGNARHVSKPIVQVIFQDNVNPDYAKLAGWLTTI HHHHHHHCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH NRELYQRYGVRQVNFVAHSMGNMAVMFYATQNSDHPKLPKMRAYVAIAGHFDGIIGMGDE HHHHHHHHCCCEEHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCEECCCCC PHRIKLAPNGYPTPPDENYATLARMRDRFPKNVKVLNIYGDVDDGSDSDGRVANNSSRSL CCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHH QYLVEGRAASYQEKEFVGKKAQHSALHENPQVAKAVDNFIW HHEECCCCCCCHHHHHHCCHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure MKLKRWVVIVFAAVVVIAGAGWYWYQEQPTDTPTTEKTTIGQTATLYLHGYSGGAGSTNT CCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEECCCEEEEEEEECCCCCCCHHH LIRHAEQSGATKVLTATVAKNGKVSWQGNARHVSKPIVQVIFQDNVNPDYAKLAGWLTTI HHHHHHHCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH NRELYQRYGVRQVNFVAHSMGNMAVMFYATQNSDHPKLPKMRAYVAIAGHFDGIIGMGDE HHHHHHHHCCCEEHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCEECCCCC PHRIKLAPNGYPTPPDENYATLARMRDRFPKNVKVLNIYGDVDDGSDSDGRVANNSSRSL CCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHH QYLVEGRAASYQEKEFVGKKAQHSALHENPQVAKAVDNFIW HHEECCCCCCCHHHHHHCCHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA