| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494288
Identifier: 116494288
GI number: 116494288
Start: 740830
End: 741321
Strand: Direct
Name: 116494288
Synonym: LSEI_0743
Alternate gene names: NA
Gene position: 740830-741321 (Clockwise)
Preceding gene: 116494286
Following gene: 116494290
Centisome position: 25.59
GC content: 45.73
Gene sequence:
>492_bases ATGGAACAAGCATTGGTTGTTTACGCTTCGGAGACAGGGTTCACGCAACGGTTTGCCCTTGGCATTGCCCAAGCACTGCA TTGTGAATTAATTGATGTGCAATTTGTCACCACTGCAGACCTGCAAAAACGCAAACTTATCATCTATGGCGGCCATCTCG TAGGTGAAAAAGTCTTGGGTCTAAAGGCCTTCTACCGCGAATTTCACCAGTCTTTACCTGATCAGTTGATAGTCTTTGGT AGCGGGATTATCCGACGGGAACAAGTGGCAATTAAGCAGATCAAGCTACAGTATCAGAACCGCTGCGTCATGCCTATCGA TTTTTATTACTTACAAGGCCAACCCAAGCTAAGTCAAATGAACCTTTTTCGGCGTATCCAGACGAGCCTTGCTTTAAAAC AATTAGGCGCCAGTCATTGCCCGGCAATTCATGAAACCATTCAACCTCTTTTGAGGGCAGTGGTGCGCTTGTTGGATCAG GCAAATTTATGA
Upstream 100 bases:
>100_bases TAACAATAAGCAAAATCATGCCAGATTTTTACAATTGACGTAATCGAAAATGTTAGCGAGCAAATAACCGGCACTGCAGG TGCGAGAAGGAGGTGGTCGA
Downstream 100 bases:
>100_bases TCGATAAAATCGTAAAAAAAGCCGTCACTTGGGCGGCTTTTTTTGCTGGGGTAGTATGATGCGAAAGTATTTGTAAGTAG ACGAAGCGACATCAGCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MEQALVVYASETGFTQRFALGIAQALHCELIDVQFVTTADLQKRKLIIYGGHLVGEKVLGLKAFYREFHQSLPDQLIVFG SGIIRREQVAIKQIKLQYQNRCVMPIDFYYLQGQPKLSQMNLFRRIQTSLALKQLGASHCPAIHETIQPLLRAVVRLLDQ ANL
Sequences:
>Translated_163_residues MEQALVVYASETGFTQRFALGIAQALHCELIDVQFVTTADLQKRKLIIYGGHLVGEKVLGLKAFYREFHQSLPDQLIVFG SGIIRREQVAIKQIKLQYQNRCVMPIDFYYLQGQPKLSQMNLFRRIQTSLALKQLGASHCPAIHETIQPLLRAVVRLLDQ ANL >Mature_163_residues MEQALVVYASETGFTQRFALGIAQALHCELIDVQFVTTADLQKRKLIIYGGHLVGEKVLGLKAFYREFHQSLPDQLIVFG SGIIRREQVAIKQIKLQYQNRCVMPIDFYYLQGQPKLSQMNLFRRIQTSLALKQLGASHCPAIHETIQPLLRAVVRLLDQ ANL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18552; Mature: 18552
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS00201 FLAVODOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQALVVYASETGFTQRFALGIAQALHCELIDVQFVTTADLQKRKLIIYGGHLVGEKVLG CCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEECCHHHHHHHHH LKAFYREFHQSLPDQLIVFGSGIIRREQVAIKQIKLQYQNRCVMPIDFYYLQGQPKLSQM HHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHH NLFRRIQTSLALKQLGASHCPAIHETIQPLLRAVVRLLDQANL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEQALVVYASETGFTQRFALGIAQALHCELIDVQFVTTADLQKRKLIIYGGHLVGEKVLG CCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEECCHHHHHHHHH LKAFYREFHQSLPDQLIVFGSGIIRREQVAIKQIKLQYQNRCVMPIDFYYLQGQPKLSQM HHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHH NLFRRIQTSLALKQLGASHCPAIHETIQPLLRAVVRLLDQANL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA