| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494159
Identifier: 116494159
GI number: 116494159
Start: 598685
End: 599062
Strand: Direct
Name: 116494159
Synonym: LSEI_0607
Alternate gene names: NA
Gene position: 598685-599062 (Clockwise)
Preceding gene: 116494158
Following gene: 116494160
Centisome position: 20.68
GC content: 50.0
Gene sequence:
>378_bases ATGAGACGAAACAAGCCTAGTTTTTGGATCATGCTGCTCATGACAATGAATCTCATGGTCGGCGTTGGCGCGAAGGCGCA GCAAGTTCAGGCAGACACTTCTGTTGCACAAGTTGAACTTGTTGGTGAACTTCCGTCAACGAACCCTGATCCTAACCCAA CGCCAACCCCTGATCCGACACCAACGCCAGAACCGGTTGATCATCAAACCACTGATCAGCATGGTCAAGCCACGCCGCTA ACCCATACAGGCTATCTGCCGCAAACTGGCAATGCTGTTCAACTTTGGTACGTGGTCATTGGGGTTGAACTTCTGATTAT TGTCATTTTAGGCATCGTGTTACTACGCGGCCGATCACGGCAGGGAGGTAAAAAATGA
Upstream 100 bases:
>100_bases ACCCCTTGGCTGTGGATTATCATTGCGATCATACTGGCGCTTGTGATCTTGATCCTGCTGTGGTTAATTTGGCGCCAACG ACGCAAAAGGAGGGAGACCG
Downstream 100 bases:
>100_bases AAAAGAAAACCTTTATCATGATTTGCCTCACGGTGATCTTCGGCATGGTGCTTGGTCCGCTGCAGTCAGTGGCTGCAGCG GAGGCAACTTGGCCGAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MRRNKPSFWIMLLMTMNLMVGVGAKAQQVQADTSVAQVELVGELPSTNPDPNPTPTPDPTPTPEPVDHQTTDQHGQATPL THTGYLPQTGNAVQLWYVVIGVELLIIVILGIVLLRGRSRQGGKK
Sequences:
>Translated_125_residues MRRNKPSFWIMLLMTMNLMVGVGAKAQQVQADTSVAQVELVGELPSTNPDPNPTPTPDPTPTPEPVDHQTTDQHGQATPL THTGYLPQTGNAVQLWYVVIGVELLIIVILGIVLLRGRSRQGGKK >Mature_125_residues MRRNKPSFWIMLLMTMNLMVGVGAKAQQVQADTSVAQVELVGELPSTNPDPNPTPTPDPTPTPEPVDHQTTDQHGQATPL THTGYLPQTGNAVQLWYVVIGVELLIIVILGIVLLRGRSRQGGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13587; Mature: 13587
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: PS50847 GRAM_POS_ANCHORING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRNKPSFWIMLLMTMNLMVGVGAKAQQVQADTSVAQVELVGELPSTNPDPNPTPTPDPT CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCC PTPEPVDHQTTDQHGQATPLTHTGYLPQTGNAVQLWYVVIGVELLIIVILGIVLLRGRSR CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QGGKK CCCCC >Mature Secondary Structure MRRNKPSFWIMLLMTMNLMVGVGAKAQQVQADTSVAQVELVGELPSTNPDPNPTPTPDPT CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCC PTPEPVDHQTTDQHGQATPLTHTGYLPQTGNAVQLWYVVIGVELLIIVILGIVLLRGRSR CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QGGKK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA