Click here to switch to the map view.

The map label for this gene is 116494087

Identifier: 116494087

GI number: 116494087

Start: 524971

End: 526212

Strand: Direct

Name: 116494087

Synonym: LSEI_0530

Alternate gene names: NA

Gene position: 524971-526212 (Clockwise)

Preceding gene: 116494086

Following gene: 116494088

Centisome position: 18.13

GC content: 42.27

Gene sequence:

>1242_bases
GTGTACGCTAAATTTGAATGTTCAAGAAAGTTGCGTCAATTTCTAAAGAAAAAGAGACAACTGTCTTTATCCGAAGCCGA
AAAGATGATTAGTGCGGCTGACGATTATGCGATTCAACATCACTTCAAGGAAGATGTGAACTTCAAAATTATTGGTCAGG
ACGGCATTGAGTATGAAGATAATCTTCCAATTGGCACAGGACAAGGCTGGCTGCATAACCTTCTCTTGATTCTAGATCAT
GCCTACCAAACCGTCTTGAGTGATCAATCGCCTGAAGCATTTAAAGCATTTTCCGACCGAGTTAGACAGGAACTAACGAT
TGAGGAACAGCCAAAAGCAGTCCAAGAAACCTTGCCAGTGGTTGCTCGTCAAGAAAAGGCTCATCATCTCAAACCAATTG
TCTCCAAAGAGGAAGAAGCAGTACGTAAAGCGGAAAGCTCAGCGCCAGCTGCTGCAAAGCAAAAACCGCAAAAATCAAAG
CCAGTCCCGTTACGGCGGCAGGCAAGAAAGAAACCAATGTGGCAATTTCCACAATTGAAGCGGCCAAAAATAAGGTTATC
TGCACAAATTATAAAGCGCTTTGTGCTAGCAGCAGCAACGATTCTAGTCGTTGCTATTTTTATGCTCTTTTTGATGAGGC
CAAAGCCTGTGCCGAGTTATCAAACGCTTATTCAGAATGCTTCTTACGTTCAAGCTGCAAAGCTTTATCCCAGTAAGCAT
CGCGATATTGAAGCCAGGTTAGTCAAGGACAATGATGAAAAATCGCTAGCTGCGTTTGTCCAAAAGTACCCATCAAATAA
TGGCCGCTTCGATTTGGCTTATATGCAGAAGAAGTTTTCAACGGTCATTTCGGTAAGCCAAGATGCGGATCTAACGGCAG
TTAGAAAGGTAAAACTAGCTATCAGTTATATTTACCAGAATCAACCAGAGAATGCTTTAACCATCAATTCAGAAATAAAG
AGTCCACAACTGCAACAGCTGATCTTTCTCGCGTTGATTCATGAGGGAAAGTTGGATCAAGCTGCGACACTTGCGAAATC
CATGAACAATAAAGATGCCGACAAAGTGCTTGAAGTTGGTAAGACCTATCAGGCTGCCTATGAGAAGGCTAAAGCGGACG
CAAATAATTCAAAACTCTCTGAAACAGATCGGAAACAAGCACTCAAAGATCAGCACAACTGGTTAGCACTCAGAAAATCA
TTAGGAGGGAAGAGTCCCTATGAAGAATCAACAAACGAATAA

Upstream 100 bases:

>100_bases
TATTGTAGTTATTTTCGCTTCTGCCGCAGTTGCTTGGTTACAAGGCTTGGCAGGTTAATTCGGTCTGAATAAGCCTCACT
CTAAAAGAAAGGAGAAGGCC

Downstream 100 bases:

>100_bases
TAAGAAACGTCATATCATCATCACAACAACAGCCGTTGCGCTACTAGGAGCTGGTGGCCTTTGGGCTGCCACACAAGCAC
ATAGTGATCAACAGGCCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MYAKFECSRKLRQFLKKKRQLSLSEAEKMISAADDYAIQHHFKEDVNFKIIGQDGIEYEDNLPIGTGQGWLHNLLLILDH
AYQTVLSDQSPEAFKAFSDRVRQELTIEEQPKAVQETLPVVARQEKAHHLKPIVSKEEEAVRKAESSAPAAAKQKPQKSK
PVPLRRQARKKPMWQFPQLKRPKIRLSAQIIKRFVLAAATILVVAIFMLFLMRPKPVPSYQTLIQNASYVQAAKLYPSKH
RDIEARLVKDNDEKSLAAFVQKYPSNNGRFDLAYMQKKFSTVISVSQDADLTAVRKVKLAISYIYQNQPENALTINSEIK
SPQLQQLIFLALIHEGKLDQAATLAKSMNNKDADKVLEVGKTYQAAYEKAKADANNSKLSETDRKQALKDQHNWLALRKS
LGGKSPYEESTNE

Sequences:

>Translated_413_residues
MYAKFECSRKLRQFLKKKRQLSLSEAEKMISAADDYAIQHHFKEDVNFKIIGQDGIEYEDNLPIGTGQGWLHNLLLILDH
AYQTVLSDQSPEAFKAFSDRVRQELTIEEQPKAVQETLPVVARQEKAHHLKPIVSKEEEAVRKAESSAPAAAKQKPQKSK
PVPLRRQARKKPMWQFPQLKRPKIRLSAQIIKRFVLAAATILVVAIFMLFLMRPKPVPSYQTLIQNASYVQAAKLYPSKH
RDIEARLVKDNDEKSLAAFVQKYPSNNGRFDLAYMQKKFSTVISVSQDADLTAVRKVKLAISYIYQNQPENALTINSEIK
SPQLQQLIFLALIHEGKLDQAATLAKSMNNKDADKVLEVGKTYQAAYEKAKADANNSKLSETDRKQALKDQHNWLALRKS
LGGKSPYEESTNE
>Mature_413_residues
MYAKFECSRKLRQFLKKKRQLSLSEAEKMISAADDYAIQHHFKEDVNFKIIGQDGIEYEDNLPIGTGQGWLHNLLLILDH
AYQTVLSDQSPEAFKAFSDRVRQELTIEEQPKAVQETLPVVARQEKAHHLKPIVSKEEEAVRKAESSAPAAAKQKPQKSK
PVPLRRQARKKPMWQFPQLKRPKIRLSAQIIKRFVLAAATILVVAIFMLFLMRPKPVPSYQTLIQNASYVQAAKLYPSKH
RDIEARLVKDNDEKSLAAFVQKYPSNNGRFDLAYMQKKFSTVISVSQDADLTAVRKVKLAISYIYQNQPENALTINSEIK
SPQLQQLIFLALIHEGKLDQAATLAKSMNNKDADKVLEVGKTYQAAYEKAKADANNSKLSETDRKQALKDQHNWLALRKS
LGGKSPYEESTNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46957; Mature: 46957

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA