Click here to switch to the map view.

The map label for this gene is 116493523

Identifier: 116493523

GI number: 116493523

Start: 1773480

End: 1774775

Strand: Reverse

Name: 116493523

Synonym: PEPE_1795

Alternate gene names: NA

Gene position: 1774775-1773480 (Counterclockwise)

Preceding gene: 116493524

Following gene: 116493522

Centisome position: 96.86

GC content: 35.19

Gene sequence:

>1296_bases
ATGAAAGATACTAAAACGCGTAAAATTGTCCGACATGTCATTTTATTAATATTAGCGCTAACTAGCATCGTGCTTTCATG
GGTAATTTGGACTAACCCGGCTCGGTATGAACGCGCTAAGCAGGTTTCCAGTGAAAAAGTACAATCAAACCAGGTTAACC
GGGATAAAGGCGATGTTATCTTACCAACGCAGGTTATCTATACCAAGGGAGAACAACAAGAATTGATTAATAATTCTAAA
AGTAGCCTTCCCAAGGCAGCTGTTAAAGAAATTTCGAGTTGGAAACTATCAAACATAACTCGGGTTTCAAGAGGTAATAA
AGAACGTTTTTTGGATTATGCTACGTTAAGTCACAGTTTGATGCTGAAATATCCAAGTAATATCACTGGGAAAATTTTCA
ATAGTATTTATGATCAAAAGTTAAATACAAACGCTGAAATTAGCCAAATTGTAGTTAACGTGAATAAACCAAACGAGTTT
TTCCTGTTAAATGATGCGACTTATGACGTTTACCAAGCTAAAGCTTCTAAACAAGATTTAAAGCAGTTACGCAAATTGAT
TAAGCAGAGTGATAGTCAGTATAAAGTGAAAGAAACCATCATGAATCATAATCTGATTAATGATTATCAAACTGCAATTA
AGGTACCTTATTATAGTTTTTCAGTTAATAAAGAGAGCAGTAGCGTCTTCACTGCCAACTTGTTAACAAATACTGATGCA
GATTCAATTGATACGAAGAAAACTAAAGATGGTACAGAATATGTCTCAAATGATACAACCAAACGTTTACTGATTAAAAA
CAATGGTTTTGTGACATTTAATAATGCCAGCAAAGCTAATGATACTGAAGAAAGCTTAAAGCGAAATCTAGAATTGAGCT
TTTATCAGATGAAACAACTAGGGGTACAAGTGGACAACATGCGCTATTTCAATTTCCATGAAAATAATCATGAAATCGAA
TTTAGAGATTTTGTAGAAGGCTTCCCGATCTTCAATGCAGACGGTCTGGATACGATTAAAGTCGCTCACCAAGCAAAACA
AACCACGACCTCATTTTCAATCTATAATCTTGACGTTCCAGTTCCCACATCAAAGAGTGACAAGGAGCTACCAAGTACGC
AAGATATGTTGGATGAATTAAAATATAGCGGAATTAATACTGATAAAATTGAAGACATTGATATTGGATATGAACGTCCA
AGTACAACTAAAGCTAATTCAACGGTTGAACTTGAACCAACCTGGTTTATCAAGTACCATGGCGACTGGACGTCATATCG
CGATTTAGTTAGCTAA

Upstream 100 bases:

>100_bases
ATGGTGGTCGAATTTGGGTCGAAAGTCGCGAAGGTGAAGGATCTACCTTCTACATTTCACTTCCATATGAACCCTTTGAG
GAAGGAGATACTTGGGAATA

Downstream 100 bases:

>100_bases
GGAGGAACAAAATGGATTTCAGAAGAATCGAAGTCATCTTTATTGTTGTATTCGCTATTTTGAATGCCTATTTATTTGGT
TCCTACTGGCAATATCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: YycH Protein; Two-Component System YycF/YycG Regulatory Protein YycH; Regulator Of WalKR; Secreted Protein

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MKDTKTRKIVRHVILLILALTSIVLSWVIWTNPARYERAKQVSSEKVQSNQVNRDKGDVILPTQVIYTKGEQQELINNSK
SSLPKAAVKEISSWKLSNITRVSRGNKERFLDYATLSHSLMLKYPSNITGKIFNSIYDQKLNTNAEISQIVVNVNKPNEF
FLLNDATYDVYQAKASKQDLKQLRKLIKQSDSQYKVKETIMNHNLINDYQTAIKVPYYSFSVNKESSSVFTANLLTNTDA
DSIDTKKTKDGTEYVSNDTTKRLLIKNNGFVTFNNASKANDTEESLKRNLELSFYQMKQLGVQVDNMRYFNFHENNHEIE
FRDFVEGFPIFNADGLDTIKVAHQAKQTTTSFSIYNLDVPVPTSKSDKELPSTQDMLDELKYSGINTDKIEDIDIGYERP
STTKANSTVELEPTWFIKYHGDWTSYRDLVS

Sequences:

>Translated_431_residues
MKDTKTRKIVRHVILLILALTSIVLSWVIWTNPARYERAKQVSSEKVQSNQVNRDKGDVILPTQVIYTKGEQQELINNSK
SSLPKAAVKEISSWKLSNITRVSRGNKERFLDYATLSHSLMLKYPSNITGKIFNSIYDQKLNTNAEISQIVVNVNKPNEF
FLLNDATYDVYQAKASKQDLKQLRKLIKQSDSQYKVKETIMNHNLINDYQTAIKVPYYSFSVNKESSSVFTANLLTNTDA
DSIDTKKTKDGTEYVSNDTTKRLLIKNNGFVTFNNASKANDTEESLKRNLELSFYQMKQLGVQVDNMRYFNFHENNHEIE
FRDFVEGFPIFNADGLDTIKVAHQAKQTTTSFSIYNLDVPVPTSKSDKELPSTQDMLDELKYSGINTDKIEDIDIGYERP
STTKANSTVELEPTWFIKYHGDWTSYRDLVS
>Mature_431_residues
MKDTKTRKIVRHVILLILALTSIVLSWVIWTNPARYERAKQVSSEKVQSNQVNRDKGDVILPTQVIYTKGEQQELINNSK
SSLPKAAVKEISSWKLSNITRVSRGNKERFLDYATLSHSLMLKYPSNITGKIFNSIYDQKLNTNAEISQIVVNVNKPNEF
FLLNDATYDVYQAKASKQDLKQLRKLIKQSDSQYKVKETIMNHNLINDYQTAIKVPYYSFSVNKESSSVFTANLLTNTDA
DSIDTKKTKDGTEYVSNDTTKRLLIKNNGFVTFNNASKANDTEESLKRNLELSFYQMKQLGVQVDNMRYFNFHENNHEIE
FRDFVEGFPIFNADGLDTIKVAHQAKQTTTSFSIYNLDVPVPTSKSDKELPSTQDMLDELKYSGINTDKIEDIDIGYERP
STTKANSTVELEPTWFIKYHGDWTSYRDLVS

Specific function: Unknown

COG id: COG4863

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49456; Mature: 49456

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDTKTRKIVRHVILLILALTSIVLSWVIWTNPARYERAKQVSSEKVQSNQVNRDKGDVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEE
LPTQVIYTKGEQQELINNSKSSLPKAAVKEISSWKLSNITRVSRGNKERFLDYATLSHSL
ECCCEEEECCCHHHHHCCCHHCCCHHHHHHHHCCHHHCCHHHCCCCHHHHHHHHHHCCEE
MLKYPSNITGKIFNSIYDQKLNTNAEISQIVVNVNKPNEFFLLNDATYDVYQAKASKQDL
EEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCHHHHHHCCHHHH
KQLRKLIKQSDSQYKVKETIMNHNLINDYQTAIKVPYYSFSVNKESSSVFTANLLTNTDA
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHEECCEEEEEECCCCCCEEEEEEEECCCC
DSIDTKKTKDGTEYVSNDTTKRLLIKNNGFVTFNNASKANDTEESLKRNLELSFYQMKQL
CCCCCCCCCCCHHHHCCCCCEEEEEECCCEEEECCCCCCCCHHHHHHHCCCHHHHHHHHH
GVQVDNMRYFNFHENNHEIEFRDFVEGFPIFNADGLDTIKVAHQAKQTTTSFSIYNLDVP
CCEECCEEEEEEECCCCCEEHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECC
VPTSKSDKELPSTQDMLDELKYSGINTDKIEDIDIGYERPSTTKANSTVELEPTWFIKYH
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCEEEECCEEEEEEC
GDWTSYRDLVS
CCCHHHHHHCC
>Mature Secondary Structure
MKDTKTRKIVRHVILLILALTSIVLSWVIWTNPARYERAKQVSSEKVQSNQVNRDKGDVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEE
LPTQVIYTKGEQQELINNSKSSLPKAAVKEISSWKLSNITRVSRGNKERFLDYATLSHSL
ECCCEEEECCCHHHHHCCCHHCCCHHHHHHHHCCHHHCCHHHCCCCHHHHHHHHHHCCEE
MLKYPSNITGKIFNSIYDQKLNTNAEISQIVVNVNKPNEFFLLNDATYDVYQAKASKQDL
EEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCHHHHHHCCHHHH
KQLRKLIKQSDSQYKVKETIMNHNLINDYQTAIKVPYYSFSVNKESSSVFTANLLTNTDA
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHEECCEEEEEECCCCCCEEEEEEEECCCC
DSIDTKKTKDGTEYVSNDTTKRLLIKNNGFVTFNNASKANDTEESLKRNLELSFYQMKQL
CCCCCCCCCCCHHHHCCCCCEEEEEECCCEEEECCCCCCCCHHHHHHHCCCHHHHHHHHH
GVQVDNMRYFNFHENNHEIEFRDFVEGFPIFNADGLDTIKVAHQAKQTTTSFSIYNLDVP
CCEECCEEEEEEECCCCCEEHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECC
VPTSKSDKELPSTQDMLDELKYSGINTDKIEDIDIGYERPSTTKANSTVELEPTWFIKYH
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCEEEECCEEEEEEC
GDWTSYRDLVS
CCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA