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The map label for this gene is yycJ [H]

Identifier: 116493521

GI number: 116493521

Start: 1771594

End: 1772397

Strand: Reverse

Name: yycJ [H]

Synonym: PEPE_1793

Alternate gene names: 116493521

Gene position: 1772397-1771594 (Counterclockwise)

Preceding gene: 116493522

Following gene: 116493520

Centisome position: 96.73

GC content: 38.43

Gene sequence:

>804_bases
ATGAGCGAAGATGGTTTGAAAGTTAGCGTACTCGCAAGTGGCAGTACGGGAAATGTAACATATATTGAAACGCCAGAACG
AAAAGTCTTGGTGGATGCTGGACTAAGTGGTAAAAAAATCGCAGGTTTAATGGACAGCGTCGGACGCGATATTAGCGAGG
TTGATTCACTTTTTGTTACCCATGAACATTCGGATCATATCCAAAGTGTGGGAGTATTAGCTCGAAAATATGGAATTGAT
ATCTATGCTAACCAAGGAACTTGGGATGCCATCGGTGGTAAAATTGGCAAAGTTCCAACTGAGCAAAAATTCATTTTTGA
TCCTAATACTACTAAGTCTCTAGATGACCTCGATATTGAAAGTTTTTCAGTTTCACATGATGCAGCTGAACCTCAGTTTT
ATGAATTCCACCATGCGGGTAAATCATTTGTAATTTTAACAGATACGGGTTATGTTTCTGATCGAATTGCTGGAACTATT
AGGAACGCAGATGGTTATCTTTTTGAAGTTAATCATGATACTGAGATGCTACGAATGGGTGGTTATCCATGGCCTTTGAA
ACAAAGAATTATGGGGGACCACGGGCATTTGTCTAATGAAGATGGTGCCAACGCTCTAATGGACGTGATTGGTAATCGAA
CTAAAAAAATCTACTTAGGTCATTTAAGCCTCCATAATAATATGAAAGAATTAGCGCATCTAACAGTAACTTCCATGATG
CAAAATCACGATTTAGCGGTTGGACACGATTTCGAAATTTTAGATACTGACCACAAAATTGCGGATCCTTTAACTTTAAT
TTAA

Upstream 100 bases:

>100_bases
TACAACTAGTACGAGCACCACATATTAAGTTGGTTACGAACTTCATTTGAAGTTCAATTTTTGCATCAATTTAAGTTAAA
TTAAGTAGGAAGGTCTAGAA

Downstream 100 bases:

>100_bases
TAAAAATTTCAAATTTTTGAGGACTAAATTCACATAACCATCGTATTTACCATGTACAATAAATTTAAAATAAATTTTGT
ATGAGGGGGGAGCGGGAAAT

Product: beta-lactamase superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSEDGLKVSVLASGSTGNVTYIETPERKVLVDAGLSGKKIAGLMDSVGRDISEVDSLFVTHEHSDHIQSVGVLARKYGID
IYANQGTWDAIGGKIGKVPTEQKFIFDPNTTKSLDDLDIESFSVSHDAAEPQFYEFHHAGKSFVILTDTGYVSDRIAGTI
RNADGYLFEVNHDTEMLRMGGYPWPLKQRIMGDHGHLSNEDGANALMDVIGNRTKKIYLGHLSLHNNMKELAHLTVTSMM
QNHDLAVGHDFEILDTDHKIADPLTLI

Sequences:

>Translated_267_residues
MSEDGLKVSVLASGSTGNVTYIETPERKVLVDAGLSGKKIAGLMDSVGRDISEVDSLFVTHEHSDHIQSVGVLARKYGID
IYANQGTWDAIGGKIGKVPTEQKFIFDPNTTKSLDDLDIESFSVSHDAAEPQFYEFHHAGKSFVILTDTGYVSDRIAGTI
RNADGYLFEVNHDTEMLRMGGYPWPLKQRIMGDHGHLSNEDGANALMDVIGNRTKKIYLGHLSLHNNMKELAHLTVTSMM
QNHDLAVGHDFEILDTDHKIADPLTLI
>Mature_266_residues
SEDGLKVSVLASGSTGNVTYIETPERKVLVDAGLSGKKIAGLMDSVGRDISEVDSLFVTHEHSDHIQSVGVLARKYGIDI
YANQGTWDAIGGKIGKVPTEQKFIFDPNTTKSLDDLDIESFSVSHDAAEPQFYEFHHAGKSFVILTDTGYVSDRIAGTIR
NADGYLFEVNHDTEMLRMGGYPWPLKQRIMGDHGHLSNEDGANALMDVIGNRTKKIYLGHLSLHNNMKELAHLTVTSMMQ
NHDLAVGHDFEILDTDHKIADPLTLI

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 29406; Mature: 29275

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDGLKVSVLASGSTGNVTYIETPERKVLVDAGLSGKKIAGLMDSVGRDISEVDSLFVT
CCCCCEEEEEEECCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHEEEE
HEHSDHIQSVGVLARKYGIDIYANQGTWDAIGGKIGKVPTEQKFIFDPNTTKSLDDLDIE
CCCHHHHHHHHHHHHHHCCEEEECCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
SFSVSHDAAEPQFYEFHHAGKSFVILTDTGYVSDRIAGTIRNADGYLFEVNHDTEMLRMG
EEECCCCCCCCCEEEHCCCCCEEEEEECCCCCCHHHEEEEECCCCEEEEECCCHHEEEEC
GYPWPLKQRIMGDHGHLSNEDGANALMDVIGNRTKKIYLGHLSLHNNMKELAHLTVTSMM
CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHH
QNHDLAVGHDFEILDTDHKIADPLTLI
HCCCEEECCCEEEEECCCCCCCCEECC
>Mature Secondary Structure 
SEDGLKVSVLASGSTGNVTYIETPERKVLVDAGLSGKKIAGLMDSVGRDISEVDSLFVT
CCCCEEEEEEECCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHEEEE
HEHSDHIQSVGVLARKYGIDIYANQGTWDAIGGKIGKVPTEQKFIFDPNTTKSLDDLDIE
CCCHHHHHHHHHHHHHHCCEEEECCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
SFSVSHDAAEPQFYEFHHAGKSFVILTDTGYVSDRIAGTIRNADGYLFEVNHDTEMLRMG
EEECCCCCCCCCEEEHCCCCCEEEEEECCCCCCHHHEEEEECCCCEEEEECCCHHEEEEC
GYPWPLKQRIMGDHGHLSNEDGANALMDVIGNRTKKIYLGHLSLHNNMKELAHLTVTSMM
CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHH
QNHDLAVGHDFEILDTDHKIADPLTLI
HCCCEEECCCEEEEECCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]