Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is 116493476
Identifier: 116493476
GI number: 116493476
Start: 1724945
End: 1725835
Strand: Reverse
Name: 116493476
Synonym: PEPE_1748
Alternate gene names: NA
Gene position: 1725835-1724945 (Counterclockwise)
Preceding gene: 116493477
Following gene: 116493474
Centisome position: 94.19
GC content: 36.7
Gene sequence:
>891_bases GTGACATTTCACGGTAGGCGATTAAATCGCAAAGGAAAAATCTGGTTGACGGGATTTTTGCTAATTGTATTTTCGATCAC ATTATTGATTGTAGAAGTGCACCATCTTTTACACTCGCGCTCTGAGACTACAACGCACATTACAACCAAACAAGCACCAA ATTCAGGATTTAGTAAATATATGGATAAAAAAGTTGGCAAGTTAAGCCAAACGAATACTGATTTAAAAAATGAAAATTTT GATTTTACCATTTATGATGTCGCCAAGCAAAAAACGTATCGTTGGAGTCAAGGCAAGATTAGCCAAATGTATACAGCAAG TACCGTTAAAGTTCCAATTTTAATTGGATTACTCCATCAAGATGCTAAATTAACAGCTAGTGATAAAAAATTAGTTGCGG GAATGATTCGTCAGAGTAGTAATGCTGATGCTACGGCTATATTTAAAAAAATGGGTGGAGTTAGCGGATTAAATGCTACT TTTGCTAGACTGGGGATGGATCATAGTCAAGCTAGTAGTAAGTGGTGGCTTTCAACAGTTAGTTCCGAAGATTACATTAA ATTATTGAAATATCTTTTTGTAAAGTCGAGCAAAATTAGTCGTACAGGTCGCAATTATATTATTTCAGAGATGTTTCAAG TTAATTCAAAACAACAGTGGGGAATCAAGGGCTTTAGCGATACACCTAATTTCTTAGCCAATAAAAACGGCTGGACCTTA TCTGGAAGTTGGATTATGAATTCGATTGGGGCTGTCGAAGTTAATGGACATCTCTATTTGATATCCATTCTGAGTGATAA TCATCCAGATGGTCAGGGGAATGTGGGGCTCAAAACAGCTAAAAAAGAAATGACGTCGCTGGTGCGCATGGCTGGTGAAT ACATCTTATAA
Upstream 100 bases:
>100_bases TTTAAATTTGGGAAAATGTTACAAAAAATAAACATTGTATAGACGTCAATTGCTGGTTATAATCGAACTGGCATATATAA TTTTAAAGGGGTATAGATGA
Downstream 100 bases:
>100_bases AACAAAAAATGATGAACGCTAAACTTTAAGGTTTAGCGTTCATCATTTTTAATATTAGAGATTTTTGTCCATGTTAAAGG TTAGTTTTGATAATAACAAA
Product: Beta-lactamase class A
Products: NA
Alternate protein names: Beta-Lactamase Class A; Beta-Lactamase Class A-Like Protein
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTFHGRRLNRKGKIWLTGFLLIVFSITLLIVEVHHLLHSRSETTTHITTKQAPNSGFSKYMDKKVGKLSQTNTDLKNENF DFTIYDVAKQKTYRWSQGKISQMYTASTVKVPILIGLLHQDAKLTASDKKLVAGMIRQSSNADATAIFKKMGGVSGLNAT FARLGMDHSQASSKWWLSTVSSEDYIKLLKYLFVKSSKISRTGRNYIISEMFQVNSKQQWGIKGFSDTPNFLANKNGWTL SGSWIMNSIGAVEVNGHLYLISILSDNHPDGQGNVGLKTAKKEMTSLVRMAGEYIL
Sequences:
>Translated_296_residues MTFHGRRLNRKGKIWLTGFLLIVFSITLLIVEVHHLLHSRSETTTHITTKQAPNSGFSKYMDKKVGKLSQTNTDLKNENF DFTIYDVAKQKTYRWSQGKISQMYTASTVKVPILIGLLHQDAKLTASDKKLVAGMIRQSSNADATAIFKKMGGVSGLNAT FARLGMDHSQASSKWWLSTVSSEDYIKLLKYLFVKSSKISRTGRNYIISEMFQVNSKQQWGIKGFSDTPNFLANKNGWTL SGSWIMNSIGAVEVNGHLYLISILSDNHPDGQGNVGLKTAKKEMTSLVRMAGEYIL >Mature_295_residues TFHGRRLNRKGKIWLTGFLLIVFSITLLIVEVHHLLHSRSETTTHITTKQAPNSGFSKYMDKKVGKLSQTNTDLKNENFD FTIYDVAKQKTYRWSQGKISQMYTASTVKVPILIGLLHQDAKLTASDKKLVAGMIRQSSNADATAIFKKMGGVSGLNATF ARLGMDHSQASSKWWLSTVSSEDYIKLLKYLFVKSSKISRTGRNYIISEMFQVNSKQQWGIKGFSDTPNFLANKNGWTLS GSWIMNSIGAVEVNGHLYLISILSDNHPDGQGNVGLKTAKKEMTSLVRMAGEYIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33138; Mature: 33006
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFHGRRLNRKGKIWLTGFLLIVFSITLLIVEVHHLLHSRSETTTHITTKQAPNSGFSKY CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH MDKKVGKLSQTNTDLKNENFDFTIYDVAKQKTYRWSQGKISQMYTASTVKVPILIGLLHQ HHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHEECCCCCHHHHHCCCCEEHHHHEEEHHC DAKLTASDKKLVAGMIRQSSNADATAIFKKMGGVSGLNATFARLGMDHSQASSKWWLSTV CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCHHHCCCCCEEEEC SSEDYIKLLKYLFVKSSKISRTGRNYIISEMFQVNSKQQWGIKGFSDTPNFLANKNGWTL CCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEE SGSWIMNSIGAVEVNGHLYLISILSDNHPDGQGNVGLKTAKKEMTSLVRMAGEYIL ECHHHHCCCCEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TFHGRRLNRKGKIWLTGFLLIVFSITLLIVEVHHLLHSRSETTTHITTKQAPNSGFSKY CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH MDKKVGKLSQTNTDLKNENFDFTIYDVAKQKTYRWSQGKISQMYTASTVKVPILIGLLHQ HHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHEECCCCCHHHHHCCCCEEHHHHEEEHHC DAKLTASDKKLVAGMIRQSSNADATAIFKKMGGVSGLNATFARLGMDHSQASSKWWLSTV CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCHHHCCCCCEEEEC SSEDYIKLLKYLFVKSSKISRTGRNYIISEMFQVNSKQQWGIKGFSDTPNFLANKNGWTL CCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEE SGSWIMNSIGAVEVNGHLYLISILSDNHPDGQGNVGLKTAKKEMTSLVRMAGEYIL ECHHHHCCCCEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA