| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493439
Identifier: 116493439
GI number: 116493439
Start: 1687883
End: 1688788
Strand: Reverse
Name: 116493439
Synonym: PEPE_1711
Alternate gene names: NA
Gene position: 1688788-1687883 (Counterclockwise)
Preceding gene: 116493441
Following gene: 116493438
Centisome position: 92.16
GC content: 37.97
Gene sequence:
>906_bases ATGAAAAAATGGATTTGGGCAGTGTTAATTTTTCTGGTCGCCGGTGTTGTTGGCGGATATGCAGTCGCTCATTATCACGA AGAACAAGTACAGTATGAGCGCAATATCACGAATGGAAAAACAGCAATTGATCAGACCAATTACACTGCAGCTAAAAACT ATTTTTCACGAGCCATAACCATTAGGAAAGATGACCAACAAGCTGCTAATTTACTGGCACAAACGAAAATGTACATGCGA GCAAGTTCTGAATTTAAGAGTAATGAATTTACTAGTGCGCGTGGGGATTATCAAACTGTGCTCACCTATAAAAAGGCTTC GGCCACTTTAAAGCAGCGGAGCGAAACTAAAGTTAAATTAATTGATAAAATTAAGCAGAATGTTAAAAAATTTAATAAAA AATTAACGGCAGCTAAGCAAAAAAATGAAGCTTGGGATTTTTACGGATCTAATGCAATCATTGATGGGCTCTTAAGCGAT AAAGAATTTTCAAAAGAGTATTACAAGACGATTTATGATCAAGCCCTAGTGCTTCAGCGTTTTAATAACGCTGGAATTGT AGCGGATCAAAATTCATTTAATACGGATACGACGCCGGATAATAACGAGAATAGTATGGAATCGGGATCGAGCCAACAGG GTCTACCACGTTATGGCGGGCCAATTCCGTCATCTACAGCTGTGCCAGATAAAACGGTTCCTAGCAAGAATAATAGTAGT AAAAGCGTTACTAAAAAAACAGCTAAGTCTAATGCAAAAGAGTCATCCAGCAGTAGTGCAACGGAGAACAGTTCTACTAA AAAAAATGAACAGACCGGTAGTTCGTCTAAAGCTGAATCCTCTAAGACAAAATCAAGGTCAACCGAAAATGAAGATATTC CTATAAGTGATACCATTGAAGAATAG
Upstream 100 bases:
>100_bases ACATTTTTTTCAAATGTGAAGCATTATATTCAAGACTAAGCAGTAAGTTAAATGCTATTTACGTGGTATAATAAATCAGA TATGCAAAGGAGGTTAGGCA
Downstream 100 bases:
>100_bases TTTTTAGCTAGTTAATCGGCTTTTTGTGGAAACTTCTTCATTTTCAGTTTGTACTAATTGCTCAAAAATTGTAAAATTAT AATGTTAGAAATTTAATTCA
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MKKWIWAVLIFLVAGVVGGYAVAHYHEEQVQYERNITNGKTAIDQTNYTAAKNYFSRAITIRKDDQQAANLLAQTKMYMR ASSEFKSNEFTSARGDYQTVLTYKKASATLKQRSETKVKLIDKIKQNVKKFNKKLTAAKQKNEAWDFYGSNAIIDGLLSD KEFSKEYYKTIYDQALVLQRFNNAGIVADQNSFNTDTTPDNNENSMESGSSQQGLPRYGGPIPSSTAVPDKTVPSKNNSS KSVTKKTAKSNAKESSSSSATENSSTKKNEQTGSSSKAESSKTKSRSTENEDIPISDTIEE
Sequences:
>Translated_301_residues MKKWIWAVLIFLVAGVVGGYAVAHYHEEQVQYERNITNGKTAIDQTNYTAAKNYFSRAITIRKDDQQAANLLAQTKMYMR ASSEFKSNEFTSARGDYQTVLTYKKASATLKQRSETKVKLIDKIKQNVKKFNKKLTAAKQKNEAWDFYGSNAIIDGLLSD KEFSKEYYKTIYDQALVLQRFNNAGIVADQNSFNTDTTPDNNENSMESGSSQQGLPRYGGPIPSSTAVPDKTVPSKNNSS KSVTKKTAKSNAKESSSSSATENSSTKKNEQTGSSSKAESSKTKSRSTENEDIPISDTIEE >Mature_301_residues MKKWIWAVLIFLVAGVVGGYAVAHYHEEQVQYERNITNGKTAIDQTNYTAAKNYFSRAITIRKDDQQAANLLAQTKMYMR ASSEFKSNEFTSARGDYQTVLTYKKASATLKQRSETKVKLIDKIKQNVKKFNKKLTAAKQKNEAWDFYGSNAIIDGLLSD KEFSKEYYKTIYDQALVLQRFNNAGIVADQNSFNTDTTPDNNENSMESGSSQQGLPRYGGPIPSSTAVPDKTVPSKNNSS KSVTKKTAKSNAKESSSSSATENSSTKKNEQTGSSSKAESSKTKSRSTENEDIPISDTIEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33428; Mature: 33428
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKWIWAVLIFLVAGVVGGYAVAHYHEEQVQYERNITNGKTAIDQTNYTAAKNYFSRAIT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHEE IRKDDQQAANLLAQTKMYMRASSEFKSNEFTSARGDYQTVLTYKKASATLKQRSETKVKL EECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IDKIKQNVKKFNKKLTAAKQKNEAWDFYGSNAIIDGLLSDKEFSKEYYKTIYDQALVLQR HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FNNAGIVADQNSFNTDTTPDNNENSMESGSSQQGLPRYGGPIPSSTAVPDKTVPSKNNSS HCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KSVTKKTAKSNAKESSSSSATENSSTKKNEQTGSSSKAESSKTKSRSTENEDIPISDTIE HHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCC E C >Mature Secondary Structure MKKWIWAVLIFLVAGVVGGYAVAHYHEEQVQYERNITNGKTAIDQTNYTAAKNYFSRAIT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHEE IRKDDQQAANLLAQTKMYMRASSEFKSNEFTSARGDYQTVLTYKKASATLKQRSETKVKL EECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IDKIKQNVKKFNKKLTAAKQKNEAWDFYGSNAIIDGLLSDKEFSKEYYKTIYDQALVLQR HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FNNAGIVADQNSFNTDTTPDNNENSMESGSSQQGLPRYGGPIPSSTAVPDKTVPSKNNSS HCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KSVTKKTAKSNAKESSSSSATENSSTKKNEQTGSSSKAESSKTKSRSTENEDIPISDTIE HHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA