| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493432
Identifier: 116493432
GI number: 116493432
Start: 1681741
End: 1682838
Strand: Reverse
Name: 116493432
Synonym: PEPE_1704
Alternate gene names: NA
Gene position: 1682838-1681741 (Counterclockwise)
Preceding gene: 116493434
Following gene: 116493431
Centisome position: 91.84
GC content: 36.16
Gene sequence:
>1098_bases ATGAAAAAATATGGAATTTTGATTCCAGCTTTAAATCCGGACCAAAAGTTAATTAAATTGGTCCATGAATTATTAAATAA TGTGATTAATTTTGATGCGCTAGTATTGGTTGATGATGGCAGTGCGGTCACGAACCAAGCTGTTTTTAAAGAACTTGAGG AAATTGGAGATCAGCGAATTCATGTTTTACATCATCAACATAATGAAGGAAAAGGCGCGGCGTTGAAAAATGGTTTCCGT TATATCCGCAACTATTTTCCAGAAATCGAAGGGATTGCGACAATGGATTCAGACGGACAACATACCGTGGGAGCTTTAAG CTCATGTATGGAGAAGTTCGAAGAAAATCCCACAGACTTGATTATTGGAGTTCGCAAATTTACTAACGAAATTCCCGCAC GAAGTCAATTCGGAAATGTCTTAACAAGTAAATTAGTGAAGTTGTTAACTCACCAGAATATCTCAGATACACAAACAGGT CTAAGAATTATTCCTCACCAATATGTAGATCAGTTAATTGAATTTCCTGGAGACCGTTTTGAGTTCGAATTTGATATGTT GCTTCAGGCGCGTAAATACGATGTAAAAGTGATTGAGCAATCCATTCCAACCATTTATTTGGATGGTAATAAGTCATCTC ATTTTCGAGTGGTTCGAGACTCGCTTGCAATCTATGCCCGTTTCTTTAAATTTGCAGGGAGCGGAATTATTTCTTTTATT GTTGATATTGCGCTTTTTGAAGGAATTATCCTACTAATGGGAAACCATGTGTTAGATAGTATTATCCTAGCAACAGTTAT TTCTAGAGCACTTTCAGCGGTAGTTAATTATACGCTGAATCATCGCGTTGTTTTTAATGGAGGTGGGCGGCAAACTTTCA TTAAATACGGGGCTTTATTTATAGTGCAGATGATTCTTTCAGGTTATCTAACGGACTTAGTTACCAATTGGTTACCACAT AATGGAAATAGCATTGCCCCCATGTTGGCCAAAATGTTGGTTGACTTCACATTATTTATCATTAGTTACCAAATTCAAAA AGACTTTATTTTTAAAAAAGATACTGAGGTGAATTATGCCAAAAATCAAGAAAGTTAG
Upstream 100 bases:
>100_bases TATTACATTTGAATGTTAATGCACTTCTTTAAGGTGTATAGAGTGTATCATGATATAGGGTGGAAAATTTTTATTTTAAG TTTAAATAATAGGTGAAATT
Downstream 100 bases:
>100_bases TTATATTTTAGCAATTGTTCTATCAGTAATTTACCTGTTTTGGCGTGTGTTTTTTACCATTCCATGGCACGCACACATAT TTACTTTGATTTTTGCTTTA
Product: glycosyltransferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MKKYGILIPALNPDQKLIKLVHELLNNVINFDALVLVDDGSAVTNQAVFKELEEIGDQRIHVLHHQHNEGKGAALKNGFR YIRNYFPEIEGIATMDSDGQHTVGALSSCMEKFEENPTDLIIGVRKFTNEIPARSQFGNVLTSKLVKLLTHQNISDTQTG LRIIPHQYVDQLIEFPGDRFEFEFDMLLQARKYDVKVIEQSIPTIYLDGNKSSHFRVVRDSLAIYARFFKFAGSGIISFI VDIALFEGIILLMGNHVLDSIILATVISRALSAVVNYTLNHRVVFNGGGRQTFIKYGALFIVQMILSGYLTDLVTNWLPH NGNSIAPMLAKMLVDFTLFIISYQIQKDFIFKKDTEVNYAKNQES
Sequences:
>Translated_365_residues MKKYGILIPALNPDQKLIKLVHELLNNVINFDALVLVDDGSAVTNQAVFKELEEIGDQRIHVLHHQHNEGKGAALKNGFR YIRNYFPEIEGIATMDSDGQHTVGALSSCMEKFEENPTDLIIGVRKFTNEIPARSQFGNVLTSKLVKLLTHQNISDTQTG LRIIPHQYVDQLIEFPGDRFEFEFDMLLQARKYDVKVIEQSIPTIYLDGNKSSHFRVVRDSLAIYARFFKFAGSGIISFI VDIALFEGIILLMGNHVLDSIILATVISRALSAVVNYTLNHRVVFNGGGRQTFIKYGALFIVQMILSGYLTDLVTNWLPH NGNSIAPMLAKMLVDFTLFIISYQIQKDFIFKKDTEVNYAKNQES >Mature_365_residues MKKYGILIPALNPDQKLIKLVHELLNNVINFDALVLVDDGSAVTNQAVFKELEEIGDQRIHVLHHQHNEGKGAALKNGFR YIRNYFPEIEGIATMDSDGQHTVGALSSCMEKFEENPTDLIIGVRKFTNEIPARSQFGNVLTSKLVKLLTHQNISDTQTG LRIIPHQYVDQLIEFPGDRFEFEFDMLLQARKYDVKVIEQSIPTIYLDGNKSSHFRVVRDSLAIYARFFKFAGSGIISFI VDIALFEGIILLMGNHVLDSIILATVISRALSAVVNYTLNHRVVFNGGGRQTFIKYGALFIVQMILSGYLTDLVTNWLPH NGNSIAPMLAKMLVDFTLFIISYQIQKDFIFKKDTEVNYAKNQES
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 41258; Mature: 41258
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYGILIPALNPDQKLIKLVHELLNNVINFDALVLVDDGSAVTNQAVFKELEEIGDQRI CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCHHE HVLHHQHNEGKGAALKNGFRYIRNYFPEIEGIATMDSDGQHTVGALSSCMEKFEENPTDL EHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHE IIGVRKFTNEIPARSQFGNVLTSKLVKLLTHQNISDTQTGLRIIPHQYVDQLIEFPGDRF EEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCHHHHHHHHHCCCCCE EFEFDMLLQARKYDVKVIEQSIPTIYLDGNKSSHFRVVRDSLAIYARFFKFAGSGIISFI EEHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH VDIALFEGIILLMGNHVLDSIILATVISRALSAVVNYTLNHRVVFNGGGRQTFIKYGALF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH IVQMILSGYLTDLVTNWLPHNGNSIAPMLAKMLVDFTLFIISYQIQKDFIFKKDTEVNYA HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCC KNQES CCCCC >Mature Secondary Structure MKKYGILIPALNPDQKLIKLVHELLNNVINFDALVLVDDGSAVTNQAVFKELEEIGDQRI CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCHHE HVLHHQHNEGKGAALKNGFRYIRNYFPEIEGIATMDSDGQHTVGALSSCMEKFEENPTDL EHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHE IIGVRKFTNEIPARSQFGNVLTSKLVKLLTHQNISDTQTGLRIIPHQYVDQLIEFPGDRF EEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCHHHHHHHHHCCCCCE EFEFDMLLQARKYDVKVIEQSIPTIYLDGNKSSHFRVVRDSLAIYARFFKFAGSGIISFI EEHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH VDIALFEGIILLMGNHVLDSIILATVISRALSAVVNYTLNHRVVFNGGGRQTFIKYGALF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH IVQMILSGYLTDLVTNWLPHNGNSIAPMLAKMLVDFTLFIISYQIQKDFIFKKDTEVNYA HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCC KNQES CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]