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The map label for this gene is asp23 [H]

Identifier: 116493396

GI number: 116493396

Start: 1652769

End: 1653185

Strand: Reverse

Name: asp23 [H]

Synonym: PEPE_1668

Alternate gene names: 116493396

Gene position: 1653185-1652769 (Counterclockwise)

Preceding gene: 116493397

Following gene: 116493395

Centisome position: 90.22

GC content: 38.37

Gene sequence:

>417_bases
ATGGACAATCCTAGAATTGCACAAGCAAGCTTAACCTTTGATGAAGGGGTTATCGAAAAAATTGCGGGTCTAGCTTCGAG
AAAAGTTGACGGAATTCTTTCCTTTGACGGCGGACTATTTGATAGTTTGACAGATAAGTTAAGAAGTAAAGTAGATCCAA
CTCAAGGAATCACTGCTGAAGTTGGGGAAAAGCAGGTGGCACTTGAGATGAATGCAACTGTTGAGTATGGCTATGATATT
CGTGAAATTTTCACTCAAGTTTGTGATGTAGTTAGCGAAGAAGTGGAACGTCTAACTGGTTTGAAGGTTGTGGAGCTCGA
TTTTCACGTAAACAATGTTTTAAGTAAAAAACAGTGGAAAGAACAAAATAACCGCAAACCAAATTCTGATTTAGAACCTA
AGCCAGAAGCTAAATAA

Upstream 100 bases:

>100_bases
GATCGTAATAAACCTTTAAAATCATTACTTGGAATGATGGTTGTTTCAAGTTTATGGTTTGCATGGAAAAATCGTCGTAA
GATTCAGGAGGTGCTAAACC

Downstream 100 bases:

>100_bases
GCTTCGAAAATTTTGAAGGGAGATCTATAACTATGGATAAAGTAGCACAACCAGAAACAAAACTAACATTTGATGATGAA
GTATTAGCTAAAATTGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MDNPRIAQASLTFDEGVIEKIAGLASRKVDGILSFDGGLFDSLTDKLRSKVDPTQGITAEVGEKQVALEMNATVEYGYDI
REIFTQVCDVVSEEVERLTGLKVVELDFHVNNVLSKKQWKEQNNRKPNSDLEPKPEAK

Sequences:

>Translated_138_residues
MDNPRIAQASLTFDEGVIEKIAGLASRKVDGILSFDGGLFDSLTDKLRSKVDPTQGITAEVGEKQVALEMNATVEYGYDI
REIFTQVCDVVSEEVERLTGLKVVELDFHVNNVLSKKQWKEQNNRKPNSDLEPKPEAK
>Mature_138_residues
MDNPRIAQASLTFDEGVIEKIAGLASRKVDGILSFDGGLFDSLTDKLRSKVDPTQGITAEVGEKQVALEMNATVEYGYDI
REIFTQVCDVVSEEVERLTGLKVVELDFHVNNVLSKKQWKEQNNRKPNSDLEPKPEAK

Specific function: May play a key role in alkaline pH tolerance [H]

COG id: COG1302

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the asp23 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005531 [H]

Pfam domain/function: PF03780 DUF322 [H]

EC number: NA

Molecular weight: Translated: 15396; Mature: 15396

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNPRIAQASLTFDEGVIEKIAGLASRKVDGILSFDGGLFDSLTDKLRSKVDPTQGITAE
CCCCCCEEEECCHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHCCCCCCCHHH
VGEKQVALEMNATVEYGYDIREIFTQVCDVVSEEVERLTGLKVVELDFHVNNVLSKKQWK
CCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHH
EQNNRKPNSDLEPKPEAK
HHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDNPRIAQASLTFDEGVIEKIAGLASRKVDGILSFDGGLFDSLTDKLRSKVDPTQGITAE
CCCCCCEEEECCHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHCCCCCCCHHH
VGEKQVALEMNATVEYGYDIREIFTQVCDVVSEEVERLTGLKVVELDFHVNNVLSKKQWK
CCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHH
EQNNRKPNSDLEPKPEAK
HHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA