| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is dhaK [H]
Identifier: 116493390
GI number: 116493390
Start: 1649233
End: 1650225
Strand: Reverse
Name: dhaK [H]
Synonym: PEPE_1662
Alternate gene names: 116493390
Gene position: 1650225-1649233 (Counterclockwise)
Preceding gene: 116493395
Following gene: 116493389
Centisome position: 90.06
GC content: 40.28
Gene sequence:
>993_bases ATGAAAAAAATCATTAATGATCCAAAGAATGTTGTCGATGAAATGGTTCAAGGATTGGTAAGAAGTTACCCCGAATATTT AGAAAGAATTCCAGAAACAGGTGTAGTTTATCGTCATGACTTAAAAAATATCCAAGGTCAAGTTGGAATTGTGAGTGGCG GTGGAAGTGGTCACGAACCCACTCATGCTGGGTTTGTAGGCGATGGAATGTTGAGTGCGGCGGTTTGTGGGGAAGTGTTT ACGTCACCAACTCCAGATCAAATCTTTGAAGCAATCAAGAAAGTTGATTCGGGAGCCGGTGTATTCTTAGTAATTAAAAA TTATTCTGGAGATGTCATGAATTTTGAAATGGCTCAAGACATGGCTGAAATGGAAGATATTAAAGTTAAATCGATAGTTG TTGATGATGATATTGCGGTAGAAAACAGTACTTATACCCAAGGACGCCGTGGCGTCGCAGGGACCATCTTCATGCACAAA GTTTTAGGTGCGGCCGCAGCTAAAGGAGCCAATCTAGACGAACTAGAACAATTAGCCCAAAAAGTTTTGCCTAATATCAA GACGATTGCAGTCGCTTTAAGTGGTGCAACTGTTCCAGAAGTAGGTAAACCTGGATTTACACTGGGTGAAGATGAAATTG AATACGGTGTAGGTATTCATGGTGAGCCAGGCTATCGGCGGGAAAAGTTACAACCTTCCAAGGCCTTAGTAGAAGAATTG GTTGGAAAATTGAATCAAGAGTTCAAATTCGAAAAGGGCGATCAAGTAGCCGTTTTAGTTAATGGAATGGGAGCTACCCC ACTCATGGAGCAGTATATCTTCATGAACGATGTTTTAAATAAATTAGCTGATTTAGGTTTGGAAGTTAAATTCACCAAGG TAGGTAGTTTAATGACTTCGCTTGAAATGGCCGGAATTTCACTAACCTTGTTTAAGGTATCCGACGAAATTGTTGAAAAC CTAAATTACGCCACAGATACCATTGCTTGGTAA
Upstream 100 bases:
>100_bases TTATTTTTATTAAACTTTTTAGGCTTTATTCTTGTGATTGTAATCGCTTTCTACTATGCTTTAATTGTACGAAAAAAGTT ACCGAGGGGGAAATGTTTTC
Downstream 100 bases:
>100_bases TTTTAATTAGGATGGAGAGAAATAGTATGTTAGATGTTGAAAATGTAAAAAGCTGGATGACCAAATTTAACGAACAAATT CAAGCTCACCACGATTATCT
Product: dihydroxyacetone kinase subunit DhaK
Products: ADP; glycerone phosphate
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MKKIINDPKNVVDEMVQGLVRSYPEYLERIPETGVVYRHDLKNIQGQVGIVSGGGSGHEPTHAGFVGDGMLSAAVCGEVF TSPTPDQIFEAIKKVDSGAGVFLVIKNYSGDVMNFEMAQDMAEMEDIKVKSIVVDDDIAVENSTYTQGRRGVAGTIFMHK VLGAAAAKGANLDELEQLAQKVLPNIKTIAVALSGATVPEVGKPGFTLGEDEIEYGVGIHGEPGYRREKLQPSKALVEEL VGKLNQEFKFEKGDQVAVLVNGMGATPLMEQYIFMNDVLNKLADLGLEVKFTKVGSLMTSLEMAGISLTLFKVSDEIVEN LNYATDTIAW
Sequences:
>Translated_330_residues MKKIINDPKNVVDEMVQGLVRSYPEYLERIPETGVVYRHDLKNIQGQVGIVSGGGSGHEPTHAGFVGDGMLSAAVCGEVF TSPTPDQIFEAIKKVDSGAGVFLVIKNYSGDVMNFEMAQDMAEMEDIKVKSIVVDDDIAVENSTYTQGRRGVAGTIFMHK VLGAAAAKGANLDELEQLAQKVLPNIKTIAVALSGATVPEVGKPGFTLGEDEIEYGVGIHGEPGYRREKLQPSKALVEEL VGKLNQEFKFEKGDQVAVLVNGMGATPLMEQYIFMNDVLNKLADLGLEVKFTKVGSLMTSLEMAGISLTLFKVSDEIVEN LNYATDTIAW >Mature_330_residues MKKIINDPKNVVDEMVQGLVRSYPEYLERIPETGVVYRHDLKNIQGQVGIVSGGGSGHEPTHAGFVGDGMLSAAVCGEVF TSPTPDQIFEAIKKVDSGAGVFLVIKNYSGDVMNFEMAQDMAEMEDIKVKSIVVDDDIAVENSTYTQGRRGVAGTIFMHK VLGAAAAKGANLDELEQLAQKVLPNIKTIAVALSGATVPEVGKPGFTLGEDEIEYGVGIHGEPGYRREKLQPSKALVEEL VGKLNQEFKFEKGDQVAVLVNGMGATPLMEQYIFMNDVLNKLADLGLEVKFTKVGSLMTSLEMAGISLTLFKVSDEIVEN LNYATDTIAW
Specific function: Dihydroxyacetone binding subunit of the dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone [H]
COG id: COG2376
COG function: function code G; Dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaK domain [H]
Homologues:
Organism=Homo sapiens, GI20149621, Length=336, Percent_Identity=37.202380952381, Blast_Score=225, Evalue=4e-59, Organism=Escherichia coli, GI87081857, Length=343, Percent_Identity=43.4402332361516, Blast_Score=288, Evalue=5e-79, Organism=Caenorhabditis elegans, GI17565018, Length=330, Percent_Identity=33.9393939393939, Blast_Score=192, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6321055, Length=336, Percent_Identity=38.0952380952381, Blast_Score=195, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6323570, Length=333, Percent_Identity=34.8348348348348, Blast_Score=167, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004006 - InterPro: IPR012736 [H]
Pfam domain/function: PF02733 Dak1 [H]
EC number: 2.7.1.29
Molecular weight: Translated: 35662; Mature: 35662
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIINDPKNVVDEMVQGLVRSYPEYLERIPETGVVYRHDLKNIQGQVGIVSGGGSGHEP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCEEEEECCCCCCCC THAGFVGDGMLSAAVCGEVFTSPTPDQIFEAIKKVDSGAGVFLVIKNYSGDVMNFEMAQD CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEHHHHHH MAEMEDIKVKSIVVDDDIAVENSTYTQGRRGVAGTIFMHKVLGAAAAKGANLDELEQLAQ HHHHHHCEEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH KVLPNIKTIAVALSGATVPEVGKPGFTLGEDEIEYGVGIHGEPGYRREKLQPSKALVEEL HHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHCCHHHHHHHHH VGKLNQEFKFEKGDQVAVLVNGMGATPLMEQYIFMNDVLNKLADLGLEVKFTKVGSLMTS HHHHCHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHH LEMAGISLTLFKVSDEIVENLNYATDTIAW HHHCCCEEEEEEHHHHHHHHCCCCHHHCCC >Mature Secondary Structure MKKIINDPKNVVDEMVQGLVRSYPEYLERIPETGVVYRHDLKNIQGQVGIVSGGGSGHEP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCEEEEECCCCCCCC THAGFVGDGMLSAAVCGEVFTSPTPDQIFEAIKKVDSGAGVFLVIKNYSGDVMNFEMAQD CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEHHHHHH MAEMEDIKVKSIVVDDDIAVENSTYTQGRRGVAGTIFMHKVLGAAAAKGANLDELEQLAQ HHHHHHCEEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH KVLPNIKTIAVALSGATVPEVGKPGFTLGEDEIEYGVGIHGEPGYRREKLQPSKALVEEL HHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHCCHHHHHHHHH VGKLNQEFKFEKGDQVAVLVNGMGATPLMEQYIFMNDVLNKLADLGLEVKFTKVGSLMTS HHHHCHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHH LEMAGISLTLFKVSDEIVENLNYATDTIAW HHHCCCEEEEEEHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; glycerone
Specific reaction: ATP + glycerone = ADP + glycerone phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11337471 [H]