The gene/protein map for NC_008525 is currently unavailable.
Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

Click here to switch to the map view.

The map label for this gene is tagB [H]

Identifier: 116492875

GI number: 116492875

Start: 1111217

End: 1112374

Strand: Reverse

Name: tagB [H]

Synonym: PEPE_1113

Alternate gene names: 116492875

Gene position: 1112374-1111217 (Counterclockwise)

Preceding gene: 116492876

Following gene: 116492874

Centisome position: 60.71

GC content: 35.75

Gene sequence:

>1158_bases
TTGAAAAAAATATATTTATTACTAGTTAGATTAGCTCGTTTGGCGTTTGGCGCCAAGAAGGCACAGTACCAAGTAGCCTA
TTTTATGAGCTTTGCTGGTAACGAAACTTTTATTAGAGAGTTAGTAAAACAGTTTGGTTCAGACGAAGTTTTAATCGTCT
ATAAAACAAACGTCAAAGAAAATGTTTTACAGTTGCAACAGGGGCACATCATAAAACATGCCATCGAGTTTAAAAAGTTT
CAAGTTACGAGCTTTGTTAAAGGCATCAAGTTGGCCCGAGTGACACTTTTTGACAATTATTATCCAGAATTAAGTGCTAT
CAATAAAACCAAAAAAGATTATTTCATTCAAATGTGGCATGCTAACGGAGCTATTAAAGCTTTTGGTTGGGAAGATCCAA
GTACATATCATCGTTCGGTGGAAGATCAACAACGTTTTCAGCGAGTTTATGATAGTTTTGACCAAATTGTAGTTGGTTCT
GAAAAAATGGCTGATGTTTTTCAGCGAAGTTGGCATGTAGCTTCCGACAAAATTGATCGAATTGGATATCCACGAACCGA
TAAATATTTTGAAGAAAGTTGGATAGAAAAAGCACGAAAAAAAATTCAAACAAAACTTCCAGAATTAACCCAAAAAAGAG
TGATTTTGTACGCACCAACTTATCGCAAAGATGTTTCATTTAGCCTTCCAGACGACTGGCGCAAAATTAAGGTACCTCAG
GATGCAGTATTGATAGTACGTTTACATCCCCACCTAGCTAATGTGGAACGTCAAATTGTTGATGCATCTCCTGATCGAGT
GATAATGGTGGACCATTTTATTTCAACTCAGGAGTTACTCTGTGTTGCTGATACTCTGATTACTGATTATTCGTCTATAG
CTTTTGATTTTAGCCTATTAGATAATGCGCGTTCTGTAATTTTCTTCACTTATGACTTAGAAGAGTTTGAACGAACGGTA
GGAATTCAGGCTAGCTTTAAGGCAGCCTTTCTAAACCAAATGGTAAATACTGTGGAACAACTTAATGACGCAATTTTGTT
TGGCAATTCAGATAAGAATGTGATTCATAAATTAAATCAACAATGGAATACATTGAATGATGGTCATTCTAGTGCCCGAT
TAATTAAGCAAGTTAAAGAGAGATGTACAGATGAGTAA

Upstream 100 bases:

>100_bases
GCGGCGATGGAGGTCTCTGATCCCCATGCCTTTGTAAGTATCACCGATACGATTAAAATATTAGGACATTTTTACGAGCC
TACTTTGTAAGGAGTTTATT

Downstream 100 bases:

>100_bases
TTTAAAAAAACAACTAAAAATTATCATTCGCTACGTATTGATTGTTATCAACGATATTTTAACTTTATTACCCATTAAAA
AAGGAGTAGTTTTATTTGAA

Product: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase

Products: NA

Alternate protein names: Major teichoic acid biosynthesis protein B [H]

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKKIYLLLVRLARLAFGAKKAQYQVAYFMSFAGNETFIRELVKQFGSDEVLIVYKTNVKENVLQLQQGHIIKHAIEFKKF
QVTSFVKGIKLARVTLFDNYYPELSAINKTKKDYFIQMWHANGAIKAFGWEDPSTYHRSVEDQQRFQRVYDSFDQIVVGS
EKMADVFQRSWHVASDKIDRIGYPRTDKYFEESWIEKARKKIQTKLPELTQKRVILYAPTYRKDVSFSLPDDWRKIKVPQ
DAVLIVRLHPHLANVERQIVDASPDRVIMVDHFISTQELLCVADTLITDYSSIAFDFSLLDNARSVIFFTYDLEEFERTV
GIQASFKAAFLNQMVNTVEQLNDAILFGNSDKNVIHKLNQQWNTLNDGHSSARLIKQVKERCTDE

Sequences:

>Translated_385_residues
MKKIYLLLVRLARLAFGAKKAQYQVAYFMSFAGNETFIRELVKQFGSDEVLIVYKTNVKENVLQLQQGHIIKHAIEFKKF
QVTSFVKGIKLARVTLFDNYYPELSAINKTKKDYFIQMWHANGAIKAFGWEDPSTYHRSVEDQQRFQRVYDSFDQIVVGS
EKMADVFQRSWHVASDKIDRIGYPRTDKYFEESWIEKARKKIQTKLPELTQKRVILYAPTYRKDVSFSLPDDWRKIKVPQ
DAVLIVRLHPHLANVERQIVDASPDRVIMVDHFISTQELLCVADTLITDYSSIAFDFSLLDNARSVIFFTYDLEEFERTV
GIQASFKAAFLNQMVNTVEQLNDAILFGNSDKNVIHKLNQQWNTLNDGHSSARLIKQVKERCTDE
>Mature_385_residues
MKKIYLLLVRLARLAFGAKKAQYQVAYFMSFAGNETFIRELVKQFGSDEVLIVYKTNVKENVLQLQQGHIIKHAIEFKKF
QVTSFVKGIKLARVTLFDNYYPELSAINKTKKDYFIQMWHANGAIKAFGWEDPSTYHRSVEDQQRFQRVYDSFDQIVVGS
EKMADVFQRSWHVASDKIDRIGYPRTDKYFEESWIEKARKKIQTKLPELTQKRVILYAPTYRKDVSFSLPDDWRKIKVPQ
DAVLIVRLHPHLANVERQIVDASPDRVIMVDHFISTQELLCVADTLITDYSSIAFDFSLLDNARSVIFFTYDLEEFERTV
GIQASFKAAFLNQMVNTVEQLNDAILFGNSDKNVIHKLNQQWNTLNDGHSSARLIKQVKERCTDE

Specific function: Catalyzes the addition of a single glycerol-P residue to the prenolpyrophosphate-linked dissacharide, as a primer for polymerisation by tagF (Potential) [H]

COG id: COG1887

COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-glycerol glycerophosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007554 [H]

Pfam domain/function: PF04464 Glyphos_transf [H]

EC number: NA

Molecular weight: Translated: 44878; Mature: 44878

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIYLLLVRLARLAFGAKKAQYQVAYFMSFAGNETFIRELVKQFGSDEVLIVYKTNVKE
CHHHHHHHHHHHHHHHCCHHHHEEHEEEEHHCCCHHHHHHHHHHHCCCCEEEEEECCCHH
NVLQLQQGHIIKHAIEFKKFQVTSFVKGIKLARVTLFDNYYPELSAINKTKKDYFIQMWH
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHCCCCCCCEEEEEE
ANGAIKAFGWEDPSTYHRSVEDQQRFQRVYDSFDQIVVGSEKMADVFQRSWHVASDKIDR
CCCCEEEECCCCCHHHHHCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHH
IGYPRTDKYFEESWIEKARKKIQTKLPELTQKRVILYAPTYRKDVSFSLPDDWRKIKVPQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEECCC
DAVLIVRLHPHLANVERQIVDASPDRVIMVDHFISTQELLCVADTLITDYSSIAFDFSLL
CEEEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DNARSVIFFTYDLEEFERTVGIQASFKAAFLNQMVNTVEQLNDAILFGNSDKNVIHKLNQ
CCCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHH
QWNTLNDGHSSARLIKQVKERCTDE
HCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKIYLLLVRLARLAFGAKKAQYQVAYFMSFAGNETFIRELVKQFGSDEVLIVYKTNVKE
CHHHHHHHHHHHHHHHCCHHHHEEHEEEEHHCCCHHHHHHHHHHHCCCCEEEEEECCCHH
NVLQLQQGHIIKHAIEFKKFQVTSFVKGIKLARVTLFDNYYPELSAINKTKKDYFIQMWH
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHCCCCCCCEEEEEE
ANGAIKAFGWEDPSTYHRSVEDQQRFQRVYDSFDQIVVGSEKMADVFQRSWHVASDKIDR
CCCCEEEECCCCCHHHHHCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHH
IGYPRTDKYFEESWIEKARKKIQTKLPELTQKRVILYAPTYRKDVSFSLPDDWRKIKVPQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEECCC
DAVLIVRLHPHLANVERQIVDASPDRVIMVDHFISTQELLCVADTLITDYSSIAFDFSLL
CEEEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DNARSVIFFTYDLEEFERTVGIQASFKAAFLNQMVNTVEQLNDAILFGNSDKNVIHKLNQ
CCCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHH
QWNTLNDGHSSARLIKQVKERCTDE
HCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1906926; 9384377; 11882717 [H]