| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is tagB [H]
Identifier: 116492875
GI number: 116492875
Start: 1111217
End: 1112374
Strand: Reverse
Name: tagB [H]
Synonym: PEPE_1113
Alternate gene names: 116492875
Gene position: 1112374-1111217 (Counterclockwise)
Preceding gene: 116492876
Following gene: 116492874
Centisome position: 60.71
GC content: 35.75
Gene sequence:
>1158_bases TTGAAAAAAATATATTTATTACTAGTTAGATTAGCTCGTTTGGCGTTTGGCGCCAAGAAGGCACAGTACCAAGTAGCCTA TTTTATGAGCTTTGCTGGTAACGAAACTTTTATTAGAGAGTTAGTAAAACAGTTTGGTTCAGACGAAGTTTTAATCGTCT ATAAAACAAACGTCAAAGAAAATGTTTTACAGTTGCAACAGGGGCACATCATAAAACATGCCATCGAGTTTAAAAAGTTT CAAGTTACGAGCTTTGTTAAAGGCATCAAGTTGGCCCGAGTGACACTTTTTGACAATTATTATCCAGAATTAAGTGCTAT CAATAAAACCAAAAAAGATTATTTCATTCAAATGTGGCATGCTAACGGAGCTATTAAAGCTTTTGGTTGGGAAGATCCAA GTACATATCATCGTTCGGTGGAAGATCAACAACGTTTTCAGCGAGTTTATGATAGTTTTGACCAAATTGTAGTTGGTTCT GAAAAAATGGCTGATGTTTTTCAGCGAAGTTGGCATGTAGCTTCCGACAAAATTGATCGAATTGGATATCCACGAACCGA TAAATATTTTGAAGAAAGTTGGATAGAAAAAGCACGAAAAAAAATTCAAACAAAACTTCCAGAATTAACCCAAAAAAGAG TGATTTTGTACGCACCAACTTATCGCAAAGATGTTTCATTTAGCCTTCCAGACGACTGGCGCAAAATTAAGGTACCTCAG GATGCAGTATTGATAGTACGTTTACATCCCCACCTAGCTAATGTGGAACGTCAAATTGTTGATGCATCTCCTGATCGAGT GATAATGGTGGACCATTTTATTTCAACTCAGGAGTTACTCTGTGTTGCTGATACTCTGATTACTGATTATTCGTCTATAG CTTTTGATTTTAGCCTATTAGATAATGCGCGTTCTGTAATTTTCTTCACTTATGACTTAGAAGAGTTTGAACGAACGGTA GGAATTCAGGCTAGCTTTAAGGCAGCCTTTCTAAACCAAATGGTAAATACTGTGGAACAACTTAATGACGCAATTTTGTT TGGCAATTCAGATAAGAATGTGATTCATAAATTAAATCAACAATGGAATACATTGAATGATGGTCATTCTAGTGCCCGAT TAATTAAGCAAGTTAAAGAGAGATGTACAGATGAGTAA
Upstream 100 bases:
>100_bases GCGGCGATGGAGGTCTCTGATCCCCATGCCTTTGTAAGTATCACCGATACGATTAAAATATTAGGACATTTTTACGAGCC TACTTTGTAAGGAGTTTATT
Downstream 100 bases:
>100_bases TTTAAAAAAACAACTAAAAATTATCATTCGCTACGTATTGATTGTTATCAACGATATTTTAACTTTATTACCCATTAAAA AAGGAGTAGTTTTATTTGAA
Product: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
Products: NA
Alternate protein names: Major teichoic acid biosynthesis protein B [H]
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MKKIYLLLVRLARLAFGAKKAQYQVAYFMSFAGNETFIRELVKQFGSDEVLIVYKTNVKENVLQLQQGHIIKHAIEFKKF QVTSFVKGIKLARVTLFDNYYPELSAINKTKKDYFIQMWHANGAIKAFGWEDPSTYHRSVEDQQRFQRVYDSFDQIVVGS EKMADVFQRSWHVASDKIDRIGYPRTDKYFEESWIEKARKKIQTKLPELTQKRVILYAPTYRKDVSFSLPDDWRKIKVPQ DAVLIVRLHPHLANVERQIVDASPDRVIMVDHFISTQELLCVADTLITDYSSIAFDFSLLDNARSVIFFTYDLEEFERTV GIQASFKAAFLNQMVNTVEQLNDAILFGNSDKNVIHKLNQQWNTLNDGHSSARLIKQVKERCTDE
Sequences:
>Translated_385_residues MKKIYLLLVRLARLAFGAKKAQYQVAYFMSFAGNETFIRELVKQFGSDEVLIVYKTNVKENVLQLQQGHIIKHAIEFKKF QVTSFVKGIKLARVTLFDNYYPELSAINKTKKDYFIQMWHANGAIKAFGWEDPSTYHRSVEDQQRFQRVYDSFDQIVVGS EKMADVFQRSWHVASDKIDRIGYPRTDKYFEESWIEKARKKIQTKLPELTQKRVILYAPTYRKDVSFSLPDDWRKIKVPQ DAVLIVRLHPHLANVERQIVDASPDRVIMVDHFISTQELLCVADTLITDYSSIAFDFSLLDNARSVIFFTYDLEEFERTV GIQASFKAAFLNQMVNTVEQLNDAILFGNSDKNVIHKLNQQWNTLNDGHSSARLIKQVKERCTDE >Mature_385_residues MKKIYLLLVRLARLAFGAKKAQYQVAYFMSFAGNETFIRELVKQFGSDEVLIVYKTNVKENVLQLQQGHIIKHAIEFKKF QVTSFVKGIKLARVTLFDNYYPELSAINKTKKDYFIQMWHANGAIKAFGWEDPSTYHRSVEDQQRFQRVYDSFDQIVVGS EKMADVFQRSWHVASDKIDRIGYPRTDKYFEESWIEKARKKIQTKLPELTQKRVILYAPTYRKDVSFSLPDDWRKIKVPQ DAVLIVRLHPHLANVERQIVDASPDRVIMVDHFISTQELLCVADTLITDYSSIAFDFSLLDNARSVIFFTYDLEEFERTV GIQASFKAAFLNQMVNTVEQLNDAILFGNSDKNVIHKLNQQWNTLNDGHSSARLIKQVKERCTDE
Specific function: Catalyzes the addition of a single glycerol-P residue to the prenolpyrophosphate-linked dissacharide, as a primer for polymerisation by tagF (Potential) [H]
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-glycerol glycerophosphotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007554 [H]
Pfam domain/function: PF04464 Glyphos_transf [H]
EC number: NA
Molecular weight: Translated: 44878; Mature: 44878
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIYLLLVRLARLAFGAKKAQYQVAYFMSFAGNETFIRELVKQFGSDEVLIVYKTNVKE CHHHHHHHHHHHHHHHCCHHHHEEHEEEEHHCCCHHHHHHHHHHHCCCCEEEEEECCCHH NVLQLQQGHIIKHAIEFKKFQVTSFVKGIKLARVTLFDNYYPELSAINKTKKDYFIQMWH HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHCCCCCCCEEEEEE ANGAIKAFGWEDPSTYHRSVEDQQRFQRVYDSFDQIVVGSEKMADVFQRSWHVASDKIDR CCCCEEEECCCCCHHHHHCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHH IGYPRTDKYFEESWIEKARKKIQTKLPELTQKRVILYAPTYRKDVSFSLPDDWRKIKVPQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEECCC DAVLIVRLHPHLANVERQIVDASPDRVIMVDHFISTQELLCVADTLITDYSSIAFDFSLL CEEEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH DNARSVIFFTYDLEEFERTVGIQASFKAAFLNQMVNTVEQLNDAILFGNSDKNVIHKLNQ CCCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHH QWNTLNDGHSSARLIKQVKERCTDE HCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKIYLLLVRLARLAFGAKKAQYQVAYFMSFAGNETFIRELVKQFGSDEVLIVYKTNVKE CHHHHHHHHHHHHHHHCCHHHHEEHEEEEHHCCCHHHHHHHHHHHCCCCEEEEEECCCHH NVLQLQQGHIIKHAIEFKKFQVTSFVKGIKLARVTLFDNYYPELSAINKTKKDYFIQMWH HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHCCCCCCCEEEEEE ANGAIKAFGWEDPSTYHRSVEDQQRFQRVYDSFDQIVVGSEKMADVFQRSWHVASDKIDR CCCCEEEECCCCCHHHHHCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHH IGYPRTDKYFEESWIEKARKKIQTKLPELTQKRVILYAPTYRKDVSFSLPDDWRKIKVPQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEECCC DAVLIVRLHPHLANVERQIVDASPDRVIMVDHFISTQELLCVADTLITDYSSIAFDFSLL CEEEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH DNARSVIFFTYDLEEFERTVGIQASFKAAFLNQMVNTVEQLNDAILFGNSDKNVIHKLNQ CCCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHH QWNTLNDGHSSARLIKQVKERCTDE HCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1906926; 9384377; 11882717 [H]