The gene/protein map for NC_008525 is currently unavailable.
Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

Click here to switch to the map view.

The map label for this gene is 116492845

Identifier: 116492845

GI number: 116492845

Start: 1079868

End: 1080896

Strand: Reverse

Name: 116492845

Synonym: PEPE_1083

Alternate gene names: NA

Gene position: 1080896-1079868 (Counterclockwise)

Preceding gene: 116492846

Following gene: 116492844

Centisome position: 58.99

GC content: 34.69

Gene sequence:

>1029_bases
ATGATTCCAGAAGATGTTTTAGCTTTTTTTGATCTTAAGCAGGGGCGCCGTCCGAAGGCAATTTTGAATGTATTGGTTGG
TAAAATGACGGTTTCGGCCTTATTTTGGGGCTTAGAATACGATATTTTGGAGTACCTAAATTTCTGGAAAACAATTGATA
CAACCTCTTTTCTAGAAAATGTTGACCGAGCTGTTGAAGGTGGTTTTTTAGCCAAAAAGGATGAGTTGATTTATTTGACG
GAGGCAGGACAACAAAAGCAATTCAGTTGTACGACTCCTACGCCTTTTATTAAAAAAGTTCGGCTCGATGAGGCAATTGA
TTTGTTGCTATTAGCTAACCAGGTAATTTCCGAATTTAGTTTTAAAAACAACCGTTATATCCCAGTCAGTGATAATCTTC
GAATTAATGTGATCTTAAAGAATTGGTTTAAGCAACTTAAGTCAAGAAACCATCATACGACAGACATTGTTCAAAAATAT
ACGCAGGGTTTAGATGAACTTTTAAGTCAATTACAACAGCACGATGCAGACATCTTGCTTAGTTATCTCCCCAATCATGT
TGATCCGGGGTGGACTATTGATCAACTAGCTCAGGCATTTGGAATCAGCAAATTTCAAATGGAACTTAAAATTAGGTTGA
TTTTTAGCAAGATTATTAGTGATGCTGTTTTAACAAAAATAGCACCGTTTGTTGATTTATTAAATTCAACCATTAAAGAA
AATGTTATGCCAGATAGCACTTATCAAACGTGGCAATTAATTCGACAAGGTAAAACGGTGGACGAAGTTGCACGTTTGAA
ACATGTTAAAACTAATACCGTGAAGGAACACATCTTGATGGCAGCAATTTTGGATTCTAATTTTCCATTTGATAAGTTTG
TTAGATTTAATTTTGAGATTGGGAAGCATCCTACAGAAGTTGACTTTAGAAGTATCCAAAGCCAAATTGCAGATATTACA
TTTTTTGATTTTAGGCTAATCCAAATCAGAAAAATTAAGGAACAACAGAATAATAATGGTAACAGATAA

Upstream 100 bases:

>100_bases
GTGATAGTTACTCATTTTTAAATATTGATGGAGTGCAATCTGGAAAATGGCGTGCTTTGAAGGTTAATGAAATTAGTCGT
CTAAAACGTCAAATTGAAAA

Downstream 100 bases:

>100_bases
AAAAATTTATCAAGTCTTACATGAGAAATTTAATTTTACTGAGTTTAAAACGGGTCAGTTAGAAATTTTACATAAACTTT
TTGACCATCACCATACATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MIPEDVLAFFDLKQGRRPKAILNVLVGKMTVSALFWGLEYDILEYLNFWKTIDTTSFLENVDRAVEGGFLAKKDELIYLT
EAGQQKQFSCTTPTPFIKKVRLDEAIDLLLLANQVISEFSFKNNRYIPVSDNLRINVILKNWFKQLKSRNHHTTDIVQKY
TQGLDELLSQLQQHDADILLSYLPNHVDPGWTIDQLAQAFGISKFQMELKIRLIFSKIISDAVLTKIAPFVDLLNSTIKE
NVMPDSTYQTWQLIRQGKTVDEVARLKHVKTNTVKEHILMAAILDSNFPFDKFVRFNFEIGKHPTEVDFRSIQSQIADIT
FFDFRLIQIRKIKEQQNNNGNR

Sequences:

>Translated_342_residues
MIPEDVLAFFDLKQGRRPKAILNVLVGKMTVSALFWGLEYDILEYLNFWKTIDTTSFLENVDRAVEGGFLAKKDELIYLT
EAGQQKQFSCTTPTPFIKKVRLDEAIDLLLLANQVISEFSFKNNRYIPVSDNLRINVILKNWFKQLKSRNHHTTDIVQKY
TQGLDELLSQLQQHDADILLSYLPNHVDPGWTIDQLAQAFGISKFQMELKIRLIFSKIISDAVLTKIAPFVDLLNSTIKE
NVMPDSTYQTWQLIRQGKTVDEVARLKHVKTNTVKEHILMAAILDSNFPFDKFVRFNFEIGKHPTEVDFRSIQSQIADIT
FFDFRLIQIRKIKEQQNNNGNR
>Mature_342_residues
MIPEDVLAFFDLKQGRRPKAILNVLVGKMTVSALFWGLEYDILEYLNFWKTIDTTSFLENVDRAVEGGFLAKKDELIYLT
EAGQQKQFSCTTPTPFIKKVRLDEAIDLLLLANQVISEFSFKNNRYIPVSDNLRINVILKNWFKQLKSRNHHTTDIVQKY
TQGLDELLSQLQQHDADILLSYLPNHVDPGWTIDQLAQAFGISKFQMELKIRLIFSKIISDAVLTKIAPFVDLLNSTIKE
NVMPDSTYQTWQLIRQGKTVDEVARLKHVKTNTVKEHILMAAILDSNFPFDKFVRFNFEIGKHPTEVDFRSIQSQIADIT
FFDFRLIQIRKIKEQQNNNGNR

Specific function: Unknown

COG id: COG4955

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39659; Mature: 39659

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPEDVLAFFDLKQGRRPKAILNVLVGKMTVSALFWGLEYDILEYLNFWKTIDTTSFLEN
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHH
VDRAVEGGFLAKKDELIYLTEAGQQKQFSCTTPTPFIKKVRLDEAIDLLLLANQVISEFS
HHHHHHCCCEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FKNNRYIPVSDNLRINVILKNWFKQLKSRNHHTTDIVQKYTQGLDELLSQLQQHDADILL
CCCCCEEECCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYLPNHVDPGWTIDQLAQAFGISKFQMELKIRLIFSKIISDAVLTKIAPFVDLLNSTIKE
HHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVMPDSTYQTWQLIRQGKTVDEVARLKHVKTNTVKEHILMAAILDSNFPFDKFVRFNFEI
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEE
GKHPTEVDFRSIQSQIADITFFDFRLIQIRKIKEQQNNNGNR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIPEDVLAFFDLKQGRRPKAILNVLVGKMTVSALFWGLEYDILEYLNFWKTIDTTSFLEN
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHH
VDRAVEGGFLAKKDELIYLTEAGQQKQFSCTTPTPFIKKVRLDEAIDLLLLANQVISEFS
HHHHHHCCCEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FKNNRYIPVSDNLRINVILKNWFKQLKSRNHHTTDIVQKYTQGLDELLSQLQQHDADILL
CCCCCEEECCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYLPNHVDPGWTIDQLAQAFGISKFQMELKIRLIFSKIISDAVLTKIAPFVDLLNSTIKE
HHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVMPDSTYQTWQLIRQGKTVDEVARLKHVKTNTVKEHILMAAILDSNFPFDKFVRFNFEI
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEE
GKHPTEVDFRSIQSQIADITFFDFRLIQIRKIKEQQNNNGNR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA