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The map label for this gene is ypiA [H]

Identifier: 116492839

GI number: 116492839

Start: 1072498

End: 1073766

Strand: Reverse

Name: ypiA [H]

Synonym: PEPE_1076

Alternate gene names: 116492839

Gene position: 1073766-1072498 (Counterclockwise)

Preceding gene: 116492840

Following gene: 116492838

Centisome position: 58.6

GC content: 36.49

Gene sequence:

>1269_bases
ATGGATAATAATGAGTCATATTCACAAAAAACATTAGCAGCACTTGAATCGGGGCAGATTGAAGAATCGAACCGTCTATA
CAGCTGGGCTCTTCGAAAAGATGACAATGAAACGCTATATAATTTAGCTGGAGAATTATTTGCATTAGGATTTGATGGAA
AAGCACTTCGTATATACGAAAAATTGATCGAAGAATATCCTAATGATGATGAACTGTTAGTCTTGGCGGCTGAAATTTTA
ATTGATCAAGGTAAAAATGATGCAGCTTTAGAAAATTTAGATCAAATTTCGCCTGACTCTGAGTTTTATGTATCATCATT
AATGGTTCAAGCTGATTTATATCAAACCGAAGAGTTGTATGAGGTTTCCGAGAGAAAGTTAGTTGAAGCAATTAAACTAG
CCCCAGAGGAGCCCGCTATCCAATTAGCCTTAGGTGAGCTGTATTATACAACGCAAGACTACTCAAAGGCTGTAAACTAC
TATCTGGGGTTAATTAAAAGTGGGATCAGTGAAATGTCCCAAATTAATATTGTTGAACGGTTAGCGGTCTCTTATGCCGC
TTATGGAAAGTTTGAAAAAGCGATTGCCTACTTTGAACAAATTCATGAAGAAGATTTGACACCAGATATTTTGATGCAAG
AAGGAATTACTTATCTTCAGTTAGATGAAAATGAGAGAGCACAAGCAACTCTTGAAAAAGTAATTGAATTGGATCCTTCT
TATAGCAGTGCTTACCCATATTTAATTAATTCTTATCAAAAAGATGAGCAATGGGATAAAGGATTGATTGCTGCCCAAGA
GGGCTTGGCGGTCGATCAATACAATCCTGAGTTGTACCTTCAAGCAGCAGAAATGGCTGAGCATGCTTTAGATAATGAAT
TGGTGGAAAAATACCTGCGTAAGGCAATTGAATTAGCACCTGAAAATACAGAAGGTATGATTCGCATTACCGATTTTTAT
AATCGAATTGGAAAATATGATGAAACTTTACGTTTCGCTAGTGACGATATAACTGATGCTCAATTAAATTGGAATTTAGC
TTTAGCATATTGGAAGACAGATGATTTTAAAAAGGCTGCTAGTCACTTTGATGCAGCATTGAGTGATTTAAAAGATACAA
CTGCCTTTTTATTGGATCTTTACCATTTTCTTAGGGAGAGTGGACAGTTGGAACACGCTGTCGATATCGCACGTAAATAC
GTAAAATTAGCACCAACCGATGTCGATATGCAGGATGAATTAGAACAGCTGGAGGAACAAGGTTATTAA

Upstream 100 bases:

>100_bases
GCCTGGTAAGGCTTTGAAGGACGCTGTTAAATAAGCGGTTTTCTGAACTTTAGTCAGCATAGCTCTGTTATGCTGGCTTT
TTGTTTGCCTGTAAAAATTT

Downstream 100 bases:

>100_bases
TAATTTAAATGATAAATTCAAAGTGAAAAGTTGGGCGCCTAAGTTCAATAAAAAAATGGTTGAAGTGATGCGTAAAAATC
AATTTAAATCTGATAATTCA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MDNNESYSQKTLAALESGQIEESNRLYSWALRKDDNETLYNLAGELFALGFDGKALRIYEKLIEEYPNDDELLVLAAEIL
IDQGKNDAALENLDQISPDSEFYVSSLMVQADLYQTEELYEVSERKLVEAIKLAPEEPAIQLALGELYYTTQDYSKAVNY
YLGLIKSGISEMSQINIVERLAVSYAAYGKFEKAIAYFEQIHEEDLTPDILMQEGITYLQLDENERAQATLEKVIELDPS
YSSAYPYLINSYQKDEQWDKGLIAAQEGLAVDQYNPELYLQAAEMAEHALDNELVEKYLRKAIELAPENTEGMIRITDFY
NRIGKYDETLRFASDDITDAQLNWNLALAYWKTDDFKKAASHFDAALSDLKDTTAFLLDLYHFLRESGQLEHAVDIARKY
VKLAPTDVDMQDELEQLEEQGY

Sequences:

>Translated_422_residues
MDNNESYSQKTLAALESGQIEESNRLYSWALRKDDNETLYNLAGELFALGFDGKALRIYEKLIEEYPNDDELLVLAAEIL
IDQGKNDAALENLDQISPDSEFYVSSLMVQADLYQTEELYEVSERKLVEAIKLAPEEPAIQLALGELYYTTQDYSKAVNY
YLGLIKSGISEMSQINIVERLAVSYAAYGKFEKAIAYFEQIHEEDLTPDILMQEGITYLQLDENERAQATLEKVIELDPS
YSSAYPYLINSYQKDEQWDKGLIAAQEGLAVDQYNPELYLQAAEMAEHALDNELVEKYLRKAIELAPENTEGMIRITDFY
NRIGKYDETLRFASDDITDAQLNWNLALAYWKTDDFKKAASHFDAALSDLKDTTAFLLDLYHFLRESGQLEHAVDIARKY
VKLAPTDVDMQDELEQLEEQGY
>Mature_422_residues
MDNNESYSQKTLAALESGQIEESNRLYSWALRKDDNETLYNLAGELFALGFDGKALRIYEKLIEEYPNDDELLVLAAEIL
IDQGKNDAALENLDQISPDSEFYVSSLMVQADLYQTEELYEVSERKLVEAIKLAPEEPAIQLALGELYYTTQDYSKAVNY
YLGLIKSGISEMSQINIVERLAVSYAAYGKFEKAIAYFEQIHEEDLTPDILMQEGITYLQLDENERAQATLEKVIELDPS
YSSAYPYLINSYQKDEQWDKGLIAAQEGLAVDQYNPELYLQAAEMAEHALDNELVEKYLRKAIELAPENTEGMIRITDFY
NRIGKYDETLRFASDDITDAQLNWNLALAYWKTDDFKKAASHFDAALSDLKDTTAFLLDLYHFLRESGQLEHAVDIARKY
VKLAPTDVDMQDELEQLEEQGY

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 48316; Mature: 48316

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNESYSQKTLAALESGQIEESNRLYSWALRKDDNETLYNLAGELFALGFDGKALRIYE
CCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHEEECCCCCHHHHHH
KLIEEYPNDDELLVLAAEILIDQGKNDAALENLDQISPDSEFYVSSLMVQADLYQTEELY
HHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
EVSERKLVEAIKLAPEEPAIQLALGELYYTTQDYSKAVNYYLGLIKSGISEMSQINIVER
HHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVSYAAYGKFEKAIAYFEQIHEEDLTPDILMQEGITYLQLDENERAQATLEKVIELDPS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCC
YSSAYPYLINSYQKDEQWDKGLIAAQEGLAVDQYNPELYLQAAEMAEHALDNELVEKYLR
CCCCCCHHHHCCCCHHHHHCCCHHHHCCCEEECCCCHHEEEHHHHHHHHHHHHHHHHHHH
KAIELAPENTEGMIRITDFYNRIGKYDETLRFASDDITDAQLNWNLALAYWKTDDFKKAA
HHHHCCCCCCCCEEEEHHHHHHHCCHHHHHHHCCCCCCCCEECEEEEEEEECCCHHHHHH
SHFDAALSDLKDTTAFLLDLYHFLRESGQLEHAVDIARKYVKLAPTDVDMQDELEQLEEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
GY
CC
>Mature Secondary Structure
MDNNESYSQKTLAALESGQIEESNRLYSWALRKDDNETLYNLAGELFALGFDGKALRIYE
CCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHEEECCCCCHHHHHH
KLIEEYPNDDELLVLAAEILIDQGKNDAALENLDQISPDSEFYVSSLMVQADLYQTEELY
HHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
EVSERKLVEAIKLAPEEPAIQLALGELYYTTQDYSKAVNYYLGLIKSGISEMSQINIVER
HHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVSYAAYGKFEKAIAYFEQIHEEDLTPDILMQEGITYLQLDENERAQATLEKVIELDPS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCC
YSSAYPYLINSYQKDEQWDKGLIAAQEGLAVDQYNPELYLQAAEMAEHALDNELVEKYLR
CCCCCCHHHHCCCCHHHHHCCCHHHHCCCEEECCCCHHEEEHHHHHHHHHHHHHHHHHHH
KAIELAPENTEGMIRITDFYNRIGKYDETLRFASDDITDAQLNWNLALAYWKTDDFKKAA
HHHHCCCCCCCCEEEEHHHHHHHCCHHHHHHHCCCCCCCCEECEEEEEEEECCCHHHHHH
SHFDAALSDLKDTTAFLLDLYHFLRESGQLEHAVDIARKYVKLAPTDVDMQDELEQLEEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
GY
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]