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The map label for this gene is 116492819

Identifier: 116492819

GI number: 116492819

Start: 1050666

End: 1051118

Strand: Reverse

Name: 116492819

Synonym: PEPE_1056

Alternate gene names: NA

Gene position: 1051118-1050666 (Counterclockwise)

Preceding gene: 116492820

Following gene: 116492818

Centisome position: 57.36

GC content: 31.79

Gene sequence:

>453_bases
TTGAGTAATTATATAAACGATTTACGACAAAAAGTTGGGAACGCACCGTTAATATTGAATACTGCTACAGGAGCACTTTT
TAATAATGCGGGTGAAGTTTTATTGCAGGAAAGGGTAGATACGAAAGATTGGGGATTTCCAGGAGGTTACCTTGAATATG
GTGAAACATATAAAAAAGCAATAATGAGAGAGTTTCAAGAAGATACAGGTCTATCGGTAATACCTGAGAAATTAATTCAA
AACACAGATGATACTTTTTATAAATATCCGAATGGTGATCAGATACAATCTATTAACCAGTTTTTTTTAGTTAGATACCT
TGAAGGAACATTATTGAGTGTAAAAACAGGTGAAACAACCAGACTAAAATATTTTAAATTAGATCAACCCCCTCAATTTT
TTAACGAACAACATGCCGAAATGTTTAAAAAAATACAACGAATGAGAGAATAA

Upstream 100 bases:

>100_bases
CTTAATTAAAAATATGATTACGAAAAACGTAGTTAAGTAATAATTTGTTTAAAGTTAATTATAATTGGAATACTTATAAT
CTGGACGAGGTGGAAATGTT

Downstream 100 bases:

>100_bases
ACTGATATTCCACAAATTTTGAATTATAAAGCAATATCTATAAGCTTTAGACGTTTTTACAAGAAACGGAGTGAGTTAAA
TGAACGCTAATAAAAAAAGA

Product: ADP-ribose pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSNYINDLRQKVGNAPLILNTATGALFNNAGEVLLQERVDTKDWGFPGGYLEYGETYKKAIMREFQEDTGLSVIPEKLIQ
NTDDTFYKYPNGDQIQSINQFFLVRYLEGTLLSVKTGETTRLKYFKLDQPPQFFNEQHAEMFKKIQRMRE

Sequences:

>Translated_150_residues
MSNYINDLRQKVGNAPLILNTATGALFNNAGEVLLQERVDTKDWGFPGGYLEYGETYKKAIMREFQEDTGLSVIPEKLIQ
NTDDTFYKYPNGDQIQSINQFFLVRYLEGTLLSVKTGETTRLKYFKLDQPPQFFNEQHAEMFKKIQRMRE
>Mature_149_residues
SNYINDLRQKVGNAPLILNTATGALFNNAGEVLLQERVDTKDWGFPGGYLEYGETYKKAIMREFQEDTGLSVIPEKLIQN
TDDTFYKYPNGDQIQSINQFFLVRYLEGTLLSVKTGETTRLKYFKLDQPPQFFNEQHAEMFKKIQRMRE

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 17462; Mature: 17331

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNYINDLRQKVGNAPLILNTATGALFNNAGEVLLQERVDTKDWGFPGGYLEYGETYKKA
CCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
IMREFQEDTGLSVIPEKLIQNTDDTFYKYPNGDQIQSINQFFLVRYLEGTLLSVKTGETT
HHHHHHHCCCCCHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCEEEEEECCCCE
RLKYFKLDQPPQFFNEQHAEMFKKIQRMRE
EEEEEECCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNYINDLRQKVGNAPLILNTATGALFNNAGEVLLQERVDTKDWGFPGGYLEYGETYKKA
CHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
IMREFQEDTGLSVIPEKLIQNTDDTFYKYPNGDQIQSINQFFLVRYLEGTLLSVKTGETT
HHHHHHHCCCCCHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCEEEEEECCCCE
RLKYFKLDQPPQFFNEQHAEMFKKIQRMRE
EEEEEECCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631946 [H]