The gene/protein map for NC_008525 is currently unavailable.
Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

Click here to switch to the map view.

The map label for this gene is 116492746

Identifier: 116492746

GI number: 116492746

Start: 992637

End: 993014

Strand: Reverse

Name: 116492746

Synonym: PEPE_0983

Alternate gene names: NA

Gene position: 993014-992637 (Counterclockwise)

Preceding gene: 116492747

Following gene: 116492745

Centisome position: 54.19

GC content: 38.1

Gene sequence:

>378_bases
ATGAAAAAAATTAGTTTTAAGAATGCTGATGGAAGCTTGAATGGTAAATTGATTGCTGGAATTATTTCATTATTGATTGT
GCTAGTTCAGCAAGTGTTAGTTATATTTGGTATTAAGTTTACTGGTGACTGGTCAGCCATTGTTGGCGTTATTAACACCG
TATTAACCATCCTTGGTATGCTGGGAGTTGTTACTGACGTTCAAACAGTAACAGCACCAATGATTAACAGTGACGAGGAA
AGCCAAGTTGAAGCGACTGCTAATAAGGTTGCTGACGAAATGCAAACACCAACATCCGTAGCTGCTACAGTGAATAGTTC
TGCAGCTTCTGAAACTGAAACAACGTCAGAATCCGATTCACAAACAAGCAAAAAATAG

Upstream 100 bases:

>100_bases
GATTACTCAGATTCAGAATTGGGTTATCGGTGTCTTGATTAGTGGCGTGCTCGTCACGTTAGTTATTTATATCGCAGAGA
AATTTTTATAGGAGGATATT

Downstream 100 bases:

>100_bases
TATAATCAATCCCCTGCGCTTCGGCGTGGGGGATTTTTTGTATTTAACTATTGACAGGTGTCATATATAACATTACATTA
TGGTAACGAGTCTGATAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Prophage Lp1 Protein

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKKISFKNADGSLNGKLIAGIISLLIVLVQQVLVIFGIKFTGDWSAIVGVINTVLTILGMLGVVTDVQTVTAPMINSDEE
SQVEATANKVADEMQTPTSVAATVNSSAASETETTSESDSQTSKK

Sequences:

>Translated_125_residues
MKKISFKNADGSLNGKLIAGIISLLIVLVQQVLVIFGIKFTGDWSAIVGVINTVLTILGMLGVVTDVQTVTAPMINSDEE
SQVEATANKVADEMQTPTSVAATVNSSAASETETTSESDSQTSKK
>Mature_125_residues
MKKISFKNADGSLNGKLIAGIISLLIVLVQQVLVIFGIKFTGDWSAIVGVINTVLTILGMLGVVTDVQTVTAPMINSDEE
SQVEATANKVADEMQTPTSVAATVNSSAASETETTSESDSQTSKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13061; Mature: 13061

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISFKNADGSLNGKLIAGIISLLIVLVQQVLVIFGIKFTGDWSAIVGVINTVLTILGM
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LGVVTDVQTVTAPMINSDEESQVEATANKVADEMQTPTSVAATVNSSAASETETTSESDS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCC
QTSKK
CCCCC
>Mature Secondary Structure
MKKISFKNADGSLNGKLIAGIISLLIVLVQQVLVIFGIKFTGDWSAIVGVINTVLTILGM
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LGVVTDVQTVTAPMINSDEESQVEATANKVADEMQTPTSVAATVNSSAASETETTSESDS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCC
QTSKK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA