| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is glxK [H]
Identifier: 116492718
GI number: 116492718
Start: 955377
End: 956516
Strand: Reverse
Name: glxK [H]
Synonym: PEPE_0955
Alternate gene names: 116492718
Gene position: 956516-955377 (Counterclockwise)
Preceding gene: 116492719
Following gene: 116492717
Centisome position: 52.2
GC content: 40.61
Gene sequence:
>1140_bases ATGAAATTTGTTATTGCACCAGATTCATTTAAGGGTGGATTAACTGCCAAACAAGCAGCCATCGCAATCCAAAATGGTAT TGCTCGGGTTTATCCGAAGGCTGATTACACGTTAGTCCCTATGGCAGATGGGGGAGAAGGAACCGTGCAAGCACTGGTTG ATGCTACTAATGGAAAATTAATTACCGAAAAAGTGACTGGTCCATTAGGAGATCCAGTAGAAGCTACATTTGGTATCTTA GGTGATCATAAAACCGCGGTAATTGAGATGTCCCAAGCAAGTGGTATTCAATTTATTAATCAAAATACACAAAATCCTTT AATAACTACAACCTATGGAACCGGAGAATTAATTTTAAAGGCTTTAGATTATCATATTTCAAAGCTGATTATTGGAATCG GAGGAAGTGCCACTAATGATGGAGGGGCTGGAATGGCTCAAGCCATCGGGGTCCATTTATTGGATAATAAGCATCATGAA ATTGGTCGTGGAGGTGAAGCACTAAAGCATTTAGCTCAAATTGACATGACTGACATTGATCCGCGTTTAGCTAAAGTCCA ACTTTTAATCGCTTCAGACGTGACGAATCCTTTAGTTGGCCCAAAGGGAGCATCCGTAGTTTTTGGACCCCAAAAAGGCG CGACGCCGGCAATGATCCGAATTTTAGATGAAAGTCTCACGCATTATGCTGAAATTATTAAACGCGATTTAAATCAAGAC TTAGCTAATTATCCTGGAGCAGGTGCAGCTGGGGGGCTAGGTACGGGCTTACTAGCTTTTACCAACGCATCTATCAAAAA GGGAATTGATATTGTTACAGAATATAGCGGACTTAAGGAACAAGCTCAAGGAGCTGATTTTGTTTTTACCGGTGAAGGTG GTGTTGATTATCAAACGAAGTTTGGTAAAACGCCTTATGGAGTGGCATTGGCAACTAAATCTGTTGCTGCAAGCGCTCCA GTAATTGTAATCACTGGTAATATTGGTGAAGGTATCGATGAATTGTATTCAGATAAAGCAATCGATGCGGTGTTTTCAAG TGTGTCAGGTGTTAAAACTTTAGAGCAAGCATTGATCGATGCTCCGCATGATATTGCCCAAGTTGCTGAGAATATTGCCC GATTAATTAATAAGTTTTAA
Upstream 100 bases:
>100_bases ACGAATACTAAAACAGATGGCTTAAGGTCATCTGTTTTTTATTTCCACTGAAATAGGATTAGATATACTAAAATTCATAA CCTAGGAGTAAATATATAAT
Downstream 100 bases:
>100_bases CTTGAGCTTTTATTTTGTAAGCATCTTAATCCCCTAAAAGACATGAATGTTTTATAATCGATGTTATAGGTAAGGGGGAA TTTAAATGAATTCAAATAAC
Product: glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MKFVIAPDSFKGGLTAKQAAIAIQNGIARVYPKADYTLVPMADGGEGTVQALVDATNGKLITEKVTGPLGDPVEATFGIL GDHKTAVIEMSQASGIQFINQNTQNPLITTTYGTGELILKALDYHISKLIIGIGGSATNDGGAGMAQAIGVHLLDNKHHE IGRGGEALKHLAQIDMTDIDPRLAKVQLLIASDVTNPLVGPKGASVVFGPQKGATPAMIRILDESLTHYAEIIKRDLNQD LANYPGAGAAGGLGTGLLAFTNASIKKGIDIVTEYSGLKEQAQGADFVFTGEGGVDYQTKFGKTPYGVALATKSVAASAP VIVITGNIGEGIDELYSDKAIDAVFSSVSGVKTLEQALIDAPHDIAQVAENIARLINKF
Sequences:
>Translated_379_residues MKFVIAPDSFKGGLTAKQAAIAIQNGIARVYPKADYTLVPMADGGEGTVQALVDATNGKLITEKVTGPLGDPVEATFGIL GDHKTAVIEMSQASGIQFINQNTQNPLITTTYGTGELILKALDYHISKLIIGIGGSATNDGGAGMAQAIGVHLLDNKHHE IGRGGEALKHLAQIDMTDIDPRLAKVQLLIASDVTNPLVGPKGASVVFGPQKGATPAMIRILDESLTHYAEIIKRDLNQD LANYPGAGAAGGLGTGLLAFTNASIKKGIDIVTEYSGLKEQAQGADFVFTGEGGVDYQTKFGKTPYGVALATKSVAASAP VIVITGNIGEGIDELYSDKAIDAVFSSVSGVKTLEQALIDAPHDIAQVAENIARLINKF >Mature_379_residues MKFVIAPDSFKGGLTAKQAAIAIQNGIARVYPKADYTLVPMADGGEGTVQALVDATNGKLITEKVTGPLGDPVEATFGIL GDHKTAVIEMSQASGIQFINQNTQNPLITTTYGTGELILKALDYHISKLIIGIGGSATNDGGAGMAQAIGVHLLDNKHHE IGRGGEALKHLAQIDMTDIDPRLAKVQLLIASDVTNPLVGPKGASVVFGPQKGATPAMIRILDESLTHYAEIIKRDLNQD LANYPGAGAAGGLGTGLLAFTNASIKKGIDIVTEYSGLKEQAQGADFVFTGEGGVDYQTKFGKTPYGVALATKSVAASAP VIVITGNIGEGIDELYSDKAIDAVFSSVSGVKTLEQALIDAPHDIAQVAENIARLINKF
Specific function: Unknown
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI145693185, Length=373, Percent_Identity=50.1340482573727, Blast_Score=322, Evalue=2e-89, Organism=Escherichia coli, GI1786724, Length=376, Percent_Identity=46.8085106382979, Blast_Score=309, Evalue=1e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 39417; Mature: 39417
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVIAPDSFKGGLTAKQAAIAIQNGIARVYPKADYTLVPMADGGEGTVQALVDATNGKL CEEEECCCCCCCCCCHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCEEEEEEECCCCEE ITEKVTGPLGDPVEATFGILGDHKTAVIEMSQASGIQFINQNTQNPLITTTYGTGELILK EEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCEEEEECCCHHHHHH ALDYHISKLIIGIGGSATNDGGAGMAQAIGVHLLDNKHHEIGRGGEALKHLAQIDMTDID HHHHHHHHEEEECCCCCCCCCCCCHHHHHCCCEECCCCCCCCCCHHHHHHHHHCCCCCCC PRLAKVQLLIASDVTNPLVGPKGASVVFGPQKGATPAMIRILDESLTHYAEIIKRDLNQD CCHHHEEEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LANYPGAGAAGGLGTGLLAFTNASIKKGIDIVTEYSGLKEQAQGADFVFTGEGGVDYQTK HHHCCCCCCCCCCHHHHHHCCCCHHHHCCHHHHHHCCHHHHHCCCCEEEECCCCCCCHHH FGKTPYGVALATKSVAASAPVIVITGNIGEGIDELYSDKAIDAVFSSVSGVKTLEQALID CCCCCCCEEEEHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APHDIAQVAENIARLINKF CCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKFVIAPDSFKGGLTAKQAAIAIQNGIARVYPKADYTLVPMADGGEGTVQALVDATNGKL CEEEECCCCCCCCCCHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCEEEEEEECCCCEE ITEKVTGPLGDPVEATFGILGDHKTAVIEMSQASGIQFINQNTQNPLITTTYGTGELILK EEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCEEEEECCCHHHHHH ALDYHISKLIIGIGGSATNDGGAGMAQAIGVHLLDNKHHEIGRGGEALKHLAQIDMTDID HHHHHHHHEEEECCCCCCCCCCCCHHHHHCCCEECCCCCCCCCCHHHHHHHHHCCCCCCC PRLAKVQLLIASDVTNPLVGPKGASVVFGPQKGATPAMIRILDESLTHYAEIIKRDLNQD CCHHHEEEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LANYPGAGAAGGLGTGLLAFTNASIKKGIDIVTEYSGLKEQAQGADFVFTGEGGVDYQTK HHHCCCCCCCCCCHHHHHHCCCCHHHHCCHHHHHHCCHHHHHCCCCEEEECCCCCCCHHH FGKTPYGVALATKSVAASAPVIVITGNIGEGIDELYSDKAIDAVFSSVSGVKTLEQALID CCCCCCCEEEEHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APHDIAQVAENIARLINKF CCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132; 10086841 [H]