The gene/protein map for NC_008525 is currently unavailable.
Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

Click here to switch to the map view.

The map label for this gene is yjeF [C]

Identifier: 116492418

GI number: 116492418

Start: 690915

End: 691754

Strand: Reverse

Name: yjeF [C]

Synonym: PEPE_0648

Alternate gene names: 116492418

Gene position: 691754-690915 (Counterclockwise)

Preceding gene: 116492420

Following gene: 116492414

Centisome position: 37.75

GC content: 40.95

Gene sequence:

>840_bases
ATGTTAAAGATTAATCAGGACGGATTGAACAACTTATGGCCCGTCCGTTCCAATGATAGTCACAAAGGAAGTTATGGTCG
GATTTTAATCGTAGCTGGTAATGATCAATACGGAGGCGCTGGAATTTTATCAAGTTCAGCGGCAGTTTATGCTGGAGGTG
GATTAGTAACCTTAGCAACGGATAAAACTAACTTTACGGCTGTCCGCTCCACTCTAGCCGAAGTTATGTTGCTCGATTTC
TTAGATTTTGATGCTTTAAAAGCAGCCCTAAAAAAATCAACGGGAGTGGTAATCGGTCCGGGATTGGGAACTAATGCTAC
TAGCTTAAAAATTTTAAAATTTGTCTTAGACCACGTTCAACCCCAAACACCTTTAGTTATTGATGGTTCAGCGATTGATT
TGATTGCTACCCATCAAATTCAGGTAGATCATCCCCAAACTATTTTTACTCCTCACCAAATGGAATGGCAACGACTTTCC
GGAATAAAGATAGTAGATCAAAACCCCTCGCTAAATCAACGTGCAGTTGACCGTTTAAAAGCAATGGTAGTTCTAAAGCA
TTATGAAACTGAAATTTACGCTCCTCACACCGACTTTCGCCAAATTATGGCTGGTAACCCTGGGATGGCAACAGGTGGTT
CAGGAGACGCCTTAACTGGAGTAATTATTGCGTTAGTAAACCAAGTCGACTCTTTGGCCTTAGGTGTTACCTTAGGAACC
TTCTTACACAGTTATACCGCCGATCAAATTTATCAAAAAGAAGCGGTTGTTTTGCCCCATCGCTTAATTCGTCGTCTCCC
CTTCACACTAAAACAACTTCAAAAAAATAAGCTACTATGA

Upstream 100 bases:

>100_bases
ATTTAGCGCTTACATAATAGAGTTTTATGCATTTTCTTCGATTTTTATTTTGCATGTTTTATGCTGGTTTGCGATATACT
ACCTTTACGAGGTGATTACA

Downstream 100 bases:

>100_bases
TTTTTGTCATAGTAGCTTATTTTTAACCTTCAACTAACCGATTAATTTCATCATCCGTTAATTCTCGATAAGTTCCGGGA
AGTAATCCCACATCTAATTC

Product: sugar kinase

Products: NA

Alternate protein names: ORF1091 [H]

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MLKINQDGLNNLWPVRSNDSHKGSYGRILIVAGNDQYGGAGILSSSAAVYAGGGLVTLATDKTNFTAVRSTLAEVMLLDF
LDFDALKAALKKSTGVVIGPGLGTNATSLKILKFVLDHVQPQTPLVIDGSAIDLIATHQIQVDHPQTIFTPHQMEWQRLS
GIKIVDQNPSLNQRAVDRLKAMVVLKHYETEIYAPHTDFRQIMAGNPGMATGGSGDALTGVIIALVNQVDSLALGVTLGT
FLHSYTADQIYQKEAVVLPHRLIRRLPFTLKQLQKNKLL

Sequences:

>Translated_279_residues
MLKINQDGLNNLWPVRSNDSHKGSYGRILIVAGNDQYGGAGILSSSAAVYAGGGLVTLATDKTNFTAVRSTLAEVMLLDF
LDFDALKAALKKSTGVVIGPGLGTNATSLKILKFVLDHVQPQTPLVIDGSAIDLIATHQIQVDHPQTIFTPHQMEWQRLS
GIKIVDQNPSLNQRAVDRLKAMVVLKHYETEIYAPHTDFRQIMAGNPGMATGGSGDALTGVIIALVNQVDSLALGVTLGT
FLHSYTADQIYQKEAVVLPHRLIRRLPFTLKQLQKNKLL
>Mature_279_residues
MLKINQDGLNNLWPVRSNDSHKGSYGRILIVAGNDQYGGAGILSSSAAVYAGGGLVTLATDKTNFTAVRSTLAEVMLLDF
LDFDALKAALKKSTGVVIGPGLGTNATSLKILKFVLDHVQPQTPLVIDGSAIDLIATHQIQVDHPQTIFTPHQMEWQRLS
GIKIVDQNPSLNQRAVDRLKAMVVLKHYETEIYAPHTDFRQIMAGNPGMATGGSGDALTGVIIALVNQVDSLALGVTLGT
FLHSYTADQIYQKEAVVLPHRLIRRLPFTLKQLQKNKLL

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=250, Percent_Identity=32.8, Blast_Score=106, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6322698, Length=234, Percent_Identity=27.3504273504274, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21357759, Length=194, Percent_Identity=28.3505154639175, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631 [H]

Pfam domain/function: PF01256 Carb_kinase [H]

EC number: NA

Molecular weight: Translated: 30242; Mature: 30242

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKINQDGLNNLWPVRSNDSHKGSYGRILIVAGNDQYGGAGILSSSAAVYAGGGLVTLAT
CEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCCEEEECCCEEEEEE
DKTNFTAVRSTLAEVMLLDFLDFDALKAALKKSTGVVIGPGLGTNATSLKILKFVLDHVQ
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCC
PQTPLVIDGSAIDLIATHQIQVDHPQTIFTPHQMEWQRLSGIKIVDQNPSLNQRAVDRLK
CCCCEEECCCEEEEEEEEEEEECCCCEECCCCCHHHHHCCCCEEEECCCCCCHHHHHHHH
AMVVLKHYETEIYAPHTDFRQIMAGNPGMATGGSGDALTGVIIALVNQVDSLALGVTLGT
HHHHHHHHCCEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLHSYTADQIYQKEAVVLPHRLIRRLPFTLKQLQKNKLL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MLKINQDGLNNLWPVRSNDSHKGSYGRILIVAGNDQYGGAGILSSSAAVYAGGGLVTLAT
CEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCCEEEECCCEEEEEE
DKTNFTAVRSTLAEVMLLDFLDFDALKAALKKSTGVVIGPGLGTNATSLKILKFVLDHVQ
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCC
PQTPLVIDGSAIDLIATHQIQVDHPQTIFTPHQMEWQRLSGIKIVDQNPSLNQRAVDRLK
CCCCEEECCCEEEEEEEEEEEECCCCEECCCCCHHHHHCCCCEEEECCCCCCHHHHHHHH
AMVVLKHYETEIYAPHTDFRQIMAGNPGMATGGSGDALTGVIIALVNQVDSLALGVTLGT
HHHHHHHHCCEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLHSYTADQIYQKEAVVLPHRLIRRLPFTLKQLQKNKLL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8930919 [H]