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The map label for this gene is yfnB [H]

Identifier: 116492283

GI number: 116492283

Start: 534905

End: 535588

Strand: Direct

Name: yfnB [H]

Synonym: PEPE_0482

Alternate gene names: 116492283

Gene position: 534905-535588 (Clockwise)

Preceding gene: 116492281

Following gene: 116492284

Centisome position: 29.19

GC content: 39.47

Gene sequence:

>684_bases
ATGATTAAATATGCAATTTTTGATTTGGACGACACTTTGCTGGATTTTAAGCGGGGAGAACGAGAAGGTTTAACCAAAAT
AATGACTAAATATGGGGTTTCTGACTTGAAGCAGGGGTTTGATACATACACCAAAATTAACCATCAAGTTTGGGAAGCAA
TTGAACAAGGTCAGGCTAGAGATGCTCTATTGAATACGCGCTTTTCCAAAGCTTTTAATTTATTAGGAATTAAAGTTGAC
GGAGCAACGGTGGAGGCAGAATATCGTAGTAGCTTAGACACTAATTTTTACAAACTACAAGGCGTAGATGAGCTTCTAAG
CGATTTAAAAGCGGCGGGGGTCCATTTACTAGTAGGAACTAATGGCGTCAAAGAAACGCAGCTTCGTCGCTTAAAAGGTT
CAGGACTAGAGCATTATTTTGAAGACTATTTCATCTCAGAAGACATTGGGTTTGCTAAGCCGGATAAACGTTTCTTTGAA
CCGATGTTTAAAAAATATGGAAATTTAACGACGAACGCCCTGATGGTGGGCGATCGGCTTCAAGCCGACGTTTTGGGTGC
CAAACGCGCACAATTAAACAGTATTTGGTACAATCCTCAAGCATTACCGGTAGTTCAAGCCTACCAACCTACTTATGTGG
CCAATTCGTTTAAACAAATTAAAAAAATTATCTTAAACGCGTAA

Upstream 100 bases:

>100_bases
GACAATATATTACTTATACAATTATATTAAACAATGTATTAATACACAAACATTTGTTTGCTATTTGGGGCTTAAATCGT
ATTTTAGAATGGAGTAAATG

Downstream 100 bases:

>100_bases
TTTAAAATGCATGGATAAACTAATTTTTGGTGCATTTTTTAGCGCCGTGAAGGTCAACTAACTAAAATGTTTTTCAAGAT
TTTTAAATCTTTGAAGAACA

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MIKYAIFDLDDTLLDFKRGEREGLTKIMTKYGVSDLKQGFDTYTKINHQVWEAIEQGQARDALLNTRFSKAFNLLGIKVD
GATVEAEYRSSLDTNFYKLQGVDELLSDLKAAGVHLLVGTNGVKETQLRRLKGSGLEHYFEDYFISEDIGFAKPDKRFFE
PMFKKYGNLTTNALMVGDRLQADVLGAKRAQLNSIWYNPQALPVVQAYQPTYVANSFKQIKKIILNA

Sequences:

>Translated_227_residues
MIKYAIFDLDDTLLDFKRGEREGLTKIMTKYGVSDLKQGFDTYTKINHQVWEAIEQGQARDALLNTRFSKAFNLLGIKVD
GATVEAEYRSSLDTNFYKLQGVDELLSDLKAAGVHLLVGTNGVKETQLRRLKGSGLEHYFEDYFISEDIGFAKPDKRFFE
PMFKKYGNLTTNALMVGDRLQADVLGAKRAQLNSIWYNPQALPVVQAYQPTYVANSFKQIKKIILNA
>Mature_227_residues
MIKYAIFDLDDTLLDFKRGEREGLTKIMTKYGVSDLKQGFDTYTKINHQVWEAIEQGQARDALLNTRFSKAFNLLGIKVD
GATVEAEYRSSLDTNFYKLQGVDELLSDLKAAGVHLLVGTNGVKETQLRRLKGSGLEHYFEDYFISEDIGFAKPDKRFFE
PMFKKYGNLTTNALMVGDRLQADVLGAKRAQLNSIWYNPQALPVVQAYQPTYVANSFKQIKKIILNA

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. YjjG family [H]

Homologues:

Organism=Escherichia coli, GI1790833, Length=224, Percent_Identity=26.7857142857143, Blast_Score=87, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR011951 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 25766; Mature: 25766

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKYAIFDLDDTLLDFKRGEREGLTKIMTKYGVSDLKQGFDTYTKINHQVWEAIEQGQAR
CCEEEEECCCHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DALLNTRFSKAFNLLGIKVDGATVEAEYRSSLDTNFYKLQGVDELLSDLKAAGVHLLVGT
HHHHHHHHHHHHHEEEEEECCCEEEHHHHHCCCCCHHHHCCHHHHHHHHHHCCEEEEECC
NGVKETQLRRLKGSGLEHYFEDYFISEDIGFAKPDKRFFEPMFKKYGNLTTNALMVGDRL
CCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHEEECCHH
QADVLGAKRAQLNSIWYNPQALPVVQAYQPTYVANSFKQIKKIILNA
HHHHHHHHHHHHHHEEECCCCCCCHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKYAIFDLDDTLLDFKRGEREGLTKIMTKYGVSDLKQGFDTYTKINHQVWEAIEQGQAR
CCEEEEECCCHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DALLNTRFSKAFNLLGIKVDGATVEAEYRSSLDTNFYKLQGVDELLSDLKAAGVHLLVGT
HHHHHHHHHHHHHEEEEEECCCEEEHHHHHCCCCCHHHHCCHHHHHHHHHHCCEEEEECC
NGVKETQLRRLKGSGLEHYFEDYFISEDIGFAKPDKRFFEPMFKKYGNLTTNALMVGDRL
CCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHEEECCHH
QADVLGAKRAQLNSIWYNPQALPVVQAYQPTYVANSFKQIKKIILNA
HHHHHHHHHHHHHHEEECCCCCCCHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]