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The map label for this gene is ybbR [H]

Identifier: 116492278

GI number: 116492278

Start: 527364

End: 528293

Strand: Direct

Name: ybbR [H]

Synonym: PEPE_0476

Alternate gene names: 116492278

Gene position: 527364-528293 (Clockwise)

Preceding gene: 116492277

Following gene: 116492279

Centisome position: 28.78

GC content: 41.18

Gene sequence:

>930_bases
GTGAAAAAACTTTTTACACAAAACTTAGGATATCGCTTAATTGCGCTAGTGTTAGCCGTCCTACTTTTTGCATACGTAAA
GACAGATCATTTAACCGCAACCCGCACCTCGGGAGGCGATTCTAATCAAAATAATTCGGCTTTGATGTCGACTAAGACGA
CTACTATCACCATGCCGGTCGACTTGGATGTTAATACTTCTAAGTACGTAGTGAGCGGTTATCGAGAGAACGTAAAGGTG
ACTTTGTCTGGAACCAGTGCGCTGGTAACGACCTTAACTAACACGCGTAATTTCAAGGTGTACTTGGACTTGCAAGATTA
CAAGGCTGGAAAATATACAGTTAAGTATAAAGTTACGGGTCTGGGAAAGGATATTAAATATAAGATTGATCCCGAATTAG
CTAAGATTTCGATTGCTAGACGACGAACTAAAAACTTTGAAATTCGATATCGTTACGATACCAATATGATCAAAGAAGGC
TACACCATGGGAAATGTTAAATCCTCAACTACGGAGGTTCAGGCCACAGGTTCAGCTACAGATATTGAACGCATTTCTCA
AGTAGTCGCAGATGTTAATGTTCCTAGCAACACAACGGAAGATATTTCTGCTCGAGCAGTATTGCAAGCTTTAGACGTAA
ACGGTAACATTGTAAACGTGGTGTTAACGCCTCAATCAGTAAATGTTACCATTCCAGTTACGAAAGTAGCTTCTAAAGCA
AAAAGTTCAGCTTCAACTAGCAGTTCAAGCAGCTCTAAATCAAGCTCAGGAGAATCTAGTTCAGATGCTTCCAGTGCCAC
GGATGAATCTGCCCAGTCCGATTCAAATGCATCCACTAATTCTTCAGCTCAAACGACCTCAGATAGTGCAACTTCCGACA
GTACAAGCACATCTGATGCTAGCGGAAACACAGATACACAGGTGAATTAA

Upstream 100 bases:

>100_bases
TACGCAATTAATTACGGCCGATGAAGGACCGACACCATTCTTTGCTTCTGTTACAGAAAATATTTCGTCGTTCTTTAAAG
GAAAAAGGGGGCGACACTAA

Downstream 100 bases:

>100_bases
CAAAGGAGATTATTAACAATGAAATTAAAGTATTTTGGTACTGACGGAGTTCGAGGAATTGCAAATGAAACATTGACTCC
AGAATTAGCGTTTCAATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKKLFTQNLGYRLIALVLAVLLFAYVKTDHLTATRTSGGDSNQNNSALMSTKTTTITMPVDLDVNTSKYVVSGYRENVKV
TLSGTSALVTTLTNTRNFKVYLDLQDYKAGKYTVKYKVTGLGKDIKYKIDPELAKISIARRRTKNFEIRYRYDTNMIKEG
YTMGNVKSSTTEVQATGSATDIERISQVVADVNVPSNTTEDISARAVLQALDVNGNIVNVVLTPQSVNVTIPVTKVASKA
KSSASTSSSSSSKSSSGESSSDASSATDESAQSDSNASTNSSAQTTSDSATSDSTSTSDASGNTDTQVN

Sequences:

>Translated_309_residues
MKKLFTQNLGYRLIALVLAVLLFAYVKTDHLTATRTSGGDSNQNNSALMSTKTTTITMPVDLDVNTSKYVVSGYRENVKV
TLSGTSALVTTLTNTRNFKVYLDLQDYKAGKYTVKYKVTGLGKDIKYKIDPELAKISIARRRTKNFEIRYRYDTNMIKEG
YTMGNVKSSTTEVQATGSATDIERISQVVADVNVPSNTTEDISARAVLQALDVNGNIVNVVLTPQSVNVTIPVTKVASKA
KSSASTSSSSSSKSSSGESSSDASSATDESAQSDSNASTNSSAQTTSDSATSDSTSTSDASGNTDTQVN
>Mature_309_residues
MKKLFTQNLGYRLIALVLAVLLFAYVKTDHLTATRTSGGDSNQNNSALMSTKTTTITMPVDLDVNTSKYVVSGYRENVKV
TLSGTSALVTTLTNTRNFKVYLDLQDYKAGKYTVKYKVTGLGKDIKYKIDPELAKISIARRRTKNFEIRYRYDTNMIKEG
YTMGNVKSSTTEVQATGSATDIERISQVVADVNVPSNTTEDISARAVLQALDVNGNIVNVVLTPQSVNVTIPVTKVASKA
KSSASTSSSSSSKSSSGESSSDASSATDESAQSDSNASTNSSAQTTSDSATSDSTSTSDASGNTDTQVN

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 YbbR-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012505 [H]

Pfam domain/function: PF07949 YbbR [H]

EC number: NA

Molecular weight: Translated: 32946; Mature: 32946

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFTQNLGYRLIALVLAVLLFAYVKTDHLTATRTSGGDSNQNNSALMSTKTTTITMPV
CCCCHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECEEEEEEEE
DLDVNTSKYVVSGYRENVKVTLSGTSALVTTLTNTRNFKVYLDLQDYKAGKYTVKYKVTG
EECCCCCCEEEECCCCCEEEEEECCCEEEEEEECCCEEEEEEEEECCCCCEEEEEEEEEE
LGKDIKYKIDPELAKISIARRRTKNFEIRYRYDTNMIKEGYTMGNVKSSTTEVQATGSAT
CCCCCEEEECCCHHHHHHHHHCCCCEEEEEEECCCHHHCCCEECCCCCCCEEEEECCCCH
DIERISQVVADVNVPSNTTEDISARAVLQALDVNGNIVNVVLTPQSVNVTIPVTKVASKA
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEHHHHHHHH
KSSASTSSSSSSKSSSGESSSDASSATDESAQSDSNASTNSSAQTTSDSATSDSTSTSDA
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SGNTDTQVN
CCCCCCCCC
>Mature Secondary Structure
MKKLFTQNLGYRLIALVLAVLLFAYVKTDHLTATRTSGGDSNQNNSALMSTKTTTITMPV
CCCCHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECEEEEEEEE
DLDVNTSKYVVSGYRENVKVTLSGTSALVTTLTNTRNFKVYLDLQDYKAGKYTVKYKVTG
EECCCCCCEEEECCCCCEEEEEECCCEEEEEEECCCEEEEEEEEECCCCCEEEEEEEEEE
LGKDIKYKIDPELAKISIARRRTKNFEIRYRYDTNMIKEGYTMGNVKSSTTEVQATGSAT
CCCCCEEEECCCHHHHHHHHHCCCCEEEEEEECCCHHHCCCEECCCCCCCEEEEECCCCH
DIERISQVVADVNVPSNTTEDISARAVLQALDVNGNIVNVVLTPQSVNVTIPVTKVASKA
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEHHHHHHHH
KSSASTSSSSSSKSSSGESSSDASSATDESAQSDSNASTNSSAQTTSDSATSDSTSTSDA
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SGNTDTQVN
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]