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The map label for this gene is whiA

Identifier: 116492255

GI number: 116492255

Start: 504534

End: 505463

Strand: Direct

Name: whiA

Synonym: PEPE_0452

Alternate gene names: 116492255

Gene position: 504534-505463 (Clockwise)

Preceding gene: 116492254

Following gene: 116492256

Centisome position: 27.53

GC content: 35.91

Gene sequence:

>930_bases
TTGTCATACGCAAGTGAAGTAAAAAAAGAACTGACAAGTTTGGAAGTTCACGAAAAAAATGCTAAGGCGGAATTGATGGC
GTTAATCCGAATGAACGGTGCAATTGGTATCAATAATCGTCAGCTTACATTAAATACACAAACTGAAAATCCAGCCATTG
CTAGAAGAATTTATTCTTTACTTAAAGAATTTTATCATTTGGAAGCAGAACTTAGTGTTCGACGGAAGATGAAATTGAAG
AAGAATAACTTGTATATCGTTCGTTTACGAACGGGCGTTAAGGAGTTATTGAATGATTTATCGATTTTAAAAGATGATTT
TCAGATTAACGAAAAAGTTCCGGAAGGTTTGTTGACCGAAGAATCAGAATTACGGTCCTATCTACGAGGAGCCTTTCTAG
CTAGTGGATCGGTAAATAATCCAGAAACTAGCCGTTATCATTTGGAAATTTATTCCCTTTATGAATCACACAACCAAATG
ATTGCTGATTGGATTAATAAGTATAATTTGAATGCTAGAACGACTGAGCGGCGTAGTGGTTATATTGTTTATTTGAAGGA
AGCAGAACATATTGCTGATTTTCTACAATTAATCGGAGCAACTAATTCGATGCTCAAATTTGAAGATGTTCGAATTATGC
GTGATATGCGGAATTCGGTTAACCGTTTGGTCAACTGTGAGACGGCTAATTTAAATAAAGTTGCTAATGCATCGATGAAA
CAGATTAACAACATCCAATTTATTGATGAAACAGTCGGATTAGGTGAATTACCACCTAAATTGCGTGAAGTTGCTGAGGC
TCGTTTGATTCATCGAGAAGTTAGTCTTAAAGAACTGGGTGAATTAGTACCTGGTGGTCCAATATCTAAATCGGGTATTA
ACCATCGCCTGAGAAAAATTAATCAATACGCTGAGAAGCTAAGAGCTTAA

Upstream 100 bases:

>100_bases
GAGAGATGGTGGAGCGTTCCATGATGGGCAGAAAGTTGTAGACGAATTGATGAATGTTTGTAGCAACCCCATCAAGAAGC
GTGATTAGGAGGTTCAGAAT

Downstream 100 bases:

>100_bases
TTAAAGCAAGAGGATATCTTCAGAAATACTTGAAGGTGTCCTCTTTTTTACACAGTGTATATTGTAAGGGCTTAATGTAA
TTGTAATGTAAAAGATTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSYASEVKKELTSLEVHEKNAKAELMALIRMNGAIGINNRQLTLNTQTENPAIARRIYSLLKEFYHLEAELSVRRKMKLK
KNNLYIVRLRTGVKELLNDLSILKDDFQINEKVPEGLLTEESELRSYLRGAFLASGSVNNPETSRYHLEIYSLYESHNQM
IADWINKYNLNARTTERRSGYIVYLKEAEHIADFLQLIGATNSMLKFEDVRIMRDMRNSVNRLVNCETANLNKVANASMK
QINNIQFIDETVGLGELPPKLREVAEARLIHREVSLKELGELVPGGPISKSGINHRLRKINQYAEKLRA

Sequences:

>Translated_309_residues
MSYASEVKKELTSLEVHEKNAKAELMALIRMNGAIGINNRQLTLNTQTENPAIARRIYSLLKEFYHLEAELSVRRKMKLK
KNNLYIVRLRTGVKELLNDLSILKDDFQINEKVPEGLLTEESELRSYLRGAFLASGSVNNPETSRYHLEIYSLYESHNQM
IADWINKYNLNARTTERRSGYIVYLKEAEHIADFLQLIGATNSMLKFEDVRIMRDMRNSVNRLVNCETANLNKVANASMK
QINNIQFIDETVGLGELPPKLREVAEARLIHREVSLKELGELVPGGPISKSGINHRLRKINQYAEKLRA
>Mature_308_residues
SYASEVKKELTSLEVHEKNAKAELMALIRMNGAIGINNRQLTLNTQTENPAIARRIYSLLKEFYHLEAELSVRRKMKLKK
NNLYIVRLRTGVKELLNDLSILKDDFQINEKVPEGLLTEESELRSYLRGAFLASGSVNNPETSRYHLEIYSLYESHNQMI
ADWINKYNLNARTTERRSGYIVYLKEAEHIADFLQLIGATNSMLKFEDVRIMRDMRNSVNRLVNCETANLNKVANASMKQ
INNIQFIDETVGLGELPPKLREVAEARLIHREVSLKELGELVPGGPISKSGINHRLRKINQYAEKLRA

Specific function: May be required for sporulation

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): WHIA_PEDPA (Q03GX4)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_803990.1
- ProteinModelPortal:   Q03GX4
- STRING:   Q03GX4
- GeneID:   4418349
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_0452
- NMPDR:   fig|278197.10.peg.420
- eggNOG:   COG1481
- HOGENOM:   HBG485718
- OMA:   DSFFGIE
- ProtClustDB:   CLSK821231
- BioCyc:   PPEN278197:PEPE_0452-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_01420
- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478
- TIGRFAMs:   TIGR00647

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N

EC number: NA

Molecular weight: Translated: 35486; Mature: 35355

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYASEVKKELTSLEVHEKNAKAELMALIRMNGAIGINNRQLTLNTQTENPAIARRIYSL
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEECCCCEEEEECCCCCHHHHHHHHHH
LKEFYHLEAELSVRRKMKLKKNNLYIVRLRTGVKELLNDLSILKDDFQINEKVPEGLLTE
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ESELRSYLRGAFLASGSVNNPETSRYHLEIYSLYESHNQMIADWINKYNLNARTTERRSG
HHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
YIVYLKEAEHIADFLQLIGATNSMLKFEDVRIMRDMRNSVNRLVNCETANLNKVANASMK
EEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QINNIQFIDETVGLGELPPKLREVAEARLIHREVSLKELGELVPGGPISKSGINHRLRKI
HHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHH
NQYAEKLRA
HHHHHHHCC
>Mature Secondary Structure 
SYASEVKKELTSLEVHEKNAKAELMALIRMNGAIGINNRQLTLNTQTENPAIARRIYSL
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEECCCCEEEEECCCCCHHHHHHHHHH
LKEFYHLEAELSVRRKMKLKKNNLYIVRLRTGVKELLNDLSILKDDFQINEKVPEGLLTE
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ESELRSYLRGAFLASGSVNNPETSRYHLEIYSLYESHNQMIADWINKYNLNARTTERRSG
HHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
YIVYLKEAEHIADFLQLIGATNSMLKFEDVRIMRDMRNSVNRLVNCETANLNKVANASMK
EEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QINNIQFIDETVGLGELPPKLREVAEARLIHREVSLKELGELVPGGPISKSGINHRLRKI
HHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHH
NQYAEKLRA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA