Click here to switch to the map view.

The map label for this gene is ybhK [C]

Identifier: 116492254

GI number: 116492254

Start: 503520

End: 504521

Strand: Direct

Name: ybhK [C]

Synonym: PEPE_0451

Alternate gene names: 116492254

Gene position: 503520-504521 (Clockwise)

Preceding gene: 116492253

Following gene: 116492255

Centisome position: 27.48

GC content: 41.32

Gene sequence:

>1002_bases
ATGACCAGAAAAAAAGGTCCTAAAATTGTCGTAATTGGTGGCGGCACGGGACTACCAGTTATCCTTAAAGAATTACACCA
ACGCAATGCTGAAATTACTGCGATTGTAACGGTCGCAGATGACGGTGGTTCATCGGGTATCATCCGAGATTATGTTAACG
TAGTTCCGCCAGGGGATATTCGAAATGTAATGGTCGCTTTATCTGACATTGCCCCTGAATTTAAAGATATTTTTCAATAT
CGCTTTAGAAGTCAAGATAAGTTTCTTGCCGGACATGCTATTGGTAATTTGATTATTGCGGCGCTTTCCGAAATGCGTGG
TGGGATTGATCCAGCCATTCGAGAATTATCAGAAATGCTTCAAGTTGAAGGCCATGTTTATCCTGCCAGTGCACAACCTT
TAGTGTTACATGCTAAATTTACGGATGGCACGCTGTTAGCAGGGGAAGCTGAAATCACAGCGGCTCATAAAGACATTAAA
GAAGTGTGGGTGGGTAACAATCCATGGAGCGAAAATAAGAAACCCCATGCTGTACCGGAAGCACTGCAGGCGATTGAAGA
AGCCGATGAAATTATTTTAGGGCCCGGTAGTCTATTTACCAGTATCTTGCCCAACTTAATGATTGAAGATATTGGACGTG
CTGTACTTAAAGCGAAAGCTGAAATTGTTTATATTTGTAATATTATGACTCAAAAGGGTGAAACTATTAATTTTACAGAT
GCGGAACATGTACGAACATTGAATCGGCACTTAGGACAAAACTTTGTCGATACCGTACTCGTTAATACCGAAATCGTGCC
AGAATCCTACATGGATTTCAATCGCTATGATGAAGTTTCCAAACAAGTAGTTCATGATTTTAAGGGATTACGGGAACAGG
GTGCACGAGTAATATCGGACAATTTCTTATTGTTGAGAGATGGTGGAGCGTTCCATGATGGGCAGAAAGTTGTAGACGAA
TTGATGAATGTTTGTAGCAACCCCATCAAGAAGCGTGATTAG

Upstream 100 bases:

>100_bases
TTGCTATTGCAGAACGTTTGGCAAAAGATTTATCTAAAAAATATGTTACAAATATATCGCATCGAGATGCGCATAAACGA
AAGGAAACGGTAAATCGATC

Downstream 100 bases:

>100_bases
GAGGTTCAGAATTTGTCATACGCAAGTGAAGTAAAAAAAGAACTGACAAGTTTGGAAGTTCACGAAAAAAATGCTAAGGC
GGAATTGATGGCGTTAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTRKKGPKIVVIGGGTGLPVILKELHQRNAEITAIVTVADDGGSSGIIRDYVNVVPPGDIRNVMVALSDIAPEFKDIFQY
RFRSQDKFLAGHAIGNLIIAALSEMRGGIDPAIRELSEMLQVEGHVYPASAQPLVLHAKFTDGTLLAGEAEITAAHKDIK
EVWVGNNPWSENKKPHAVPEALQAIEEADEIILGPGSLFTSILPNLMIEDIGRAVLKAKAEIVYICNIMTQKGETINFTD
AEHVRTLNRHLGQNFVDTVLVNTEIVPESYMDFNRYDEVSKQVVHDFKGLREQGARVISDNFLLLRDGGAFHDGQKVVDE
LMNVCSNPIKKRD

Sequences:

>Translated_333_residues
MTRKKGPKIVVIGGGTGLPVILKELHQRNAEITAIVTVADDGGSSGIIRDYVNVVPPGDIRNVMVALSDIAPEFKDIFQY
RFRSQDKFLAGHAIGNLIIAALSEMRGGIDPAIRELSEMLQVEGHVYPASAQPLVLHAKFTDGTLLAGEAEITAAHKDIK
EVWVGNNPWSENKKPHAVPEALQAIEEADEIILGPGSLFTSILPNLMIEDIGRAVLKAKAEIVYICNIMTQKGETINFTD
AEHVRTLNRHLGQNFVDTVLVNTEIVPESYMDFNRYDEVSKQVVHDFKGLREQGARVISDNFLLLRDGGAFHDGQKVVDE
LMNVCSNPIKKRD
>Mature_332_residues
TRKKGPKIVVIGGGTGLPVILKELHQRNAEITAIVTVADDGGSSGIIRDYVNVVPPGDIRNVMVALSDIAPEFKDIFQYR
FRSQDKFLAGHAIGNLIIAALSEMRGGIDPAIRELSEMLQVEGHVYPASAQPLVLHAKFTDGTLLAGEAEITAAHKDIKE
VWVGNNPWSENKKPHAVPEALQAIEEADEIILGPGSLFTSILPNLMIEDIGRAVLKAKAEIVYICNIMTQKGETINFTDA
EHVRTLNRHLGQNFVDTVLVNTEIVPESYMDFNRYDEVSKQVVHDFKGLREQGARVISDNFLLLRDGGAFHDGQKVVDEL
MNVCSNPIKKRD

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=259, Percent_Identity=32.046332046332, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 36652; Mature: 36521

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS01036 HSP70_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKKGPKIVVIGGGTGLPVILKELHQRNAEITAIVTVADDGGSSGIIRDYVNVVPPGDI
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCHH
RNVMVALSDIAPEFKDIFQYRFRSQDKFLAGHAIGNLIIAALSEMRGGIDPAIRELSEML
HHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QVEGHVYPASAQPLVLHAKFTDGTLLAGEAEITAAHKDIKEVWVGNNPWSENKKPHAVPE
HHCCCEECCCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
ALQAIEEADEIILGPGSLFTSILPNLMIEDIGRAVLKAKAEIVYICNIMTQKGETINFTD
HHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCCEECCCC
AEHVRTLNRHLGQNFVDTVLVNTEIVPESYMDFNRYDEVSKQVVHDFKGLREQGARVISD
HHHHHHHHHHHCCHHHHHHHHCCEECCHHHHCHHHHHHHHHHHHHHHHHHHHHCCEEECC
NFLLLRDGGAFHDGQKVVDELMNVCSNPIKKRD
CEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TRKKGPKIVVIGGGTGLPVILKELHQRNAEITAIVTVADDGGSSGIIRDYVNVVPPGDI
CCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCHH
RNVMVALSDIAPEFKDIFQYRFRSQDKFLAGHAIGNLIIAALSEMRGGIDPAIRELSEML
HHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QVEGHVYPASAQPLVLHAKFTDGTLLAGEAEITAAHKDIKEVWVGNNPWSENKKPHAVPE
HHCCCEECCCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
ALQAIEEADEIILGPGSLFTSILPNLMIEDIGRAVLKAKAEIVYICNIMTQKGETINFTD
HHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCCEECCCC
AEHVRTLNRHLGQNFVDTVLVNTEIVPESYMDFNRYDEVSKQVVHDFKGLREQGARVISD
HHHHHHHHHHHCCHHHHHHHHCCEECCHHHHCHHHHHHHHHHHHHHHHHHHHHCCEEECC
NFLLLRDGGAFHDGQKVVDELMNVCSNPIKKRD
CEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]