| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is eutD [H]
Identifier: 116492140
GI number: 116492140
Start: 385259
End: 386230
Strand: Direct
Name: eutD [H]
Synonym: PEPE_0337
Alternate gene names: 116492140
Gene position: 385259-386230 (Clockwise)
Preceding gene: 116492139
Following gene: 116492142
Centisome position: 21.02
GC content: 41.67
Gene sequence:
>972_bases ATGGATTTATTTGAAGGTTTGAAGTCAAAAATTAAGGGCCAAAATAGAACAGTTGTATTTCCCGAAGGTGAAGATGTTCG AGTTTTAGCTGCCGCTATTCGACTAGCTGATGATGGCTTAGTTCAATCAATCTTACTCGGAGTGGAAGCTGATATTAAAG CTACTGCTGAAAAGCATGGATTAAACCTTGAAAATGTGCAAATTATTGATCCGAGCCAATATCCGGAAGCCGATCAAAAG GAAATGATTGATAAGTTAGTTGAACGTCGTAAGGGTAAAAATACCGAAGAACAGGTTATCGAAATGCTCAAAGATGTAAA TTACTTCGGAACTATGCTAGTTTACTTAGGCAAGGCGGATGCCATGGTATCTGGAGCAGTTCATGCTACTGGTGATACAG TTCGCCCCGCTCTTCAAATTATCAAGACTAAACCAGGAATGCGTCGAATTAGTGGAGCATTTATCATGCAACGCGAAAAT GAACGCTATGTCTTTGGGGATGCAGCTATTAATATTGATCCCGATGCAGAAACATTGGCTGAAATTGCGATTCAAAGTGC AGAAACTGCTCGCCTATTTGACATCGACCCTAAGGTTGCAATGTTAAGCTTTTCAACTAAAGGCTCAGCGGCTGGACCAA TGGTAGATAAAGTTCGCGAAGCTACTAAGGTTGCCCAAGAACGTGATCCAAAGACCCCATATGATGGTGAACTTCAGTTT GATGCAGCCTTTGTTCCAGCTGTTGGAGCAAGTAAGGCTCCAGATTCAGAAATTGCAGGACATGCGAATGTCTTTATCTT CCCTGAACTTCAATCTGGAAACATTGGTTATAAGATTGCTCAACGTCTAGGCGGTTTTGAAGCAATTGGCCCAATCTTGC AAGGACTTAATGCACCGGTTTCCGATTTATCTCGTGGAGCTAGTGAAGAAGATGTCTATAAAGTAGCAATTATTACCGCA GCTCAAGTTTAG
Upstream 100 bases:
>100_bases TGCGGAAGACTCGGCTGTCCAAGTCATGGTAATTCCAACTGATGAAGAATTGGCGATTGCTCGCGATGTTGAAAAGTTTA AAAAAATGGGGGACTAACTC
Downstream 100 bases:
>100_bases AAAATAAAAATAGGAATCGGAATTTTTCCGACTCCTATTTTTTTTGTGCACATTCAGGGCAATACCCTTCGACTTCAATA TGATTGGCAATAATGTCGTA
Product: phosphotransacetylase
Products: NA
Alternate protein names: Phosphotransacetylase; Vegetative protein 43; VEG43 [H]
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MDLFEGLKSKIKGQNRTVVFPEGEDVRVLAAAIRLADDGLVQSILLGVEADIKATAEKHGLNLENVQIIDPSQYPEADQK EMIDKLVERRKGKNTEEQVIEMLKDVNYFGTMLVYLGKADAMVSGAVHATGDTVRPALQIIKTKPGMRRISGAFIMQREN ERYVFGDAAINIDPDAETLAEIAIQSAETARLFDIDPKVAMLSFSTKGSAAGPMVDKVREATKVAQERDPKTPYDGELQF DAAFVPAVGASKAPDSEIAGHANVFIFPELQSGNIGYKIAQRLGGFEAIGPILQGLNAPVSDLSRGASEEDVYKVAIITA AQV
Sequences:
>Translated_323_residues MDLFEGLKSKIKGQNRTVVFPEGEDVRVLAAAIRLADDGLVQSILLGVEADIKATAEKHGLNLENVQIIDPSQYPEADQK EMIDKLVERRKGKNTEEQVIEMLKDVNYFGTMLVYLGKADAMVSGAVHATGDTVRPALQIIKTKPGMRRISGAFIMQREN ERYVFGDAAINIDPDAETLAEIAIQSAETARLFDIDPKVAMLSFSTKGSAAGPMVDKVREATKVAQERDPKTPYDGELQF DAAFVPAVGASKAPDSEIAGHANVFIFPELQSGNIGYKIAQRLGGFEAIGPILQGLNAPVSDLSRGASEEDVYKVAIITA AQV >Mature_323_residues MDLFEGLKSKIKGQNRTVVFPEGEDVRVLAAAIRLADDGLVQSILLGVEADIKATAEKHGLNLENVQIIDPSQYPEADQK EMIDKLVERRKGKNTEEQVIEMLKDVNYFGTMLVYLGKADAMVSGAVHATGDTVRPALQIIKTKPGMRRISGAFIMQREN ERYVFGDAAINIDPDAETLAEIAIQSAETARLFDIDPKVAMLSFSTKGSAAGPMVDKVREATKVAQERDPKTPYDGELQF DAAFVPAVGASKAPDSEIAGHANVFIFPELQSGNIGYKIAQRLGGFEAIGPILQGLNAPVSDLSRGASEEDVYKVAIITA AQV
Specific function: Conversion of acetate to acetyl-CoA; second step. [C]
COG id: COG0280
COG function: function code C; Phosphotransacetylase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788635, Length=309, Percent_Identity=47.2491909385113, Blast_Score=268, Evalue=4e-73, Organism=Escherichia coli, GI1788800, Length=306, Percent_Identity=44.1176470588235, Blast_Score=247, Evalue=6e-67, Organism=Escherichia coli, GI1788806, Length=305, Percent_Identity=31.1475409836066, Blast_Score=148, Evalue=5e-37,
Paralogues:
None
Copy number: 1420 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 1250 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012147 - InterPro: IPR004614 - InterPro: IPR002505 [H]
Pfam domain/function: PF01515 PTA_PTB [H]
EC number: =2.3.1.8 [H]
Molecular weight: Translated: 34904; Mature: 34904
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLFEGLKSKIKGQNRTVVFPEGEDVRVLAAAIRLADDGLVQSILLGVEADIKATAEKHG CCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHC LNLENVQIIDPSQYPEADQKEMIDKLVERRKGKNTEEQVIEMLKDVNYFGTMLVYLGKAD CCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHCCCH AMVSGAVHATGDTVRPALQIIKTKPGMRRISGAFIMQRENERYVFGDAAINIDPDAETLA HHHHCCEECCCCHHHHHHHHHHCCCCHHHHCCEEEEEECCCEEEEECEEEEECCCHHHHH EIAIQSAETARLFDIDPKVAMLSFSTKGSAAGPMVDKVREATKVAQERDPKTPYDGELQF HHHHHCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE DAAFVPAVGASKAPDSEIAGHANVFIFPELQSGNIGYKIAQRLGGFEAIGPILQGLNAPV CEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHCCCCH SDLSRGASEEDVYKVAIITAAQV HHHHCCCCCCCEEEEEEEEEECC >Mature Secondary Structure MDLFEGLKSKIKGQNRTVVFPEGEDVRVLAAAIRLADDGLVQSILLGVEADIKATAEKHG CCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHC LNLENVQIIDPSQYPEADQKEMIDKLVERRKGKNTEEQVIEMLKDVNYFGTMLVYLGKAD CCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHCCCH AMVSGAVHATGDTVRPALQIIKTKPGMRRISGAFIMQRENERYVFGDAAINIDPDAETLA HHHHCCEECCCCHHHHHHHHHHCCCCHHHHCCEEEEEECCCEEEEECEEEEECCCHHHHH EIAIQSAETARLFDIDPKVAMLSFSTKGSAAGPMVDKVREATKVAQERDPKTPYDGELQF HHHHHCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE DAAFVPAVGASKAPDSEIAGHANVFIFPELQSGNIGYKIAQRLGGFEAIGPILQGLNAPV CEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHCCCCH SDLSRGASEEDVYKVAIITAAQV HHHHCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377; 9298659 [H]