The gene/protein map for NC_008525 is currently unavailable.
Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492124

Identifier: 116492124

GI number: 116492124

Start: 368650

End: 370200

Strand: Direct

Name: 116492124

Synonym: PEPE_0321

Alternate gene names: NA

Gene position: 368650-370200 (Clockwise)

Preceding gene: 116492123

Following gene: 116492125

Centisome position: 20.12

GC content: 36.23

Gene sequence:

>1551_bases
ATGCGTAAAATAATTATGTTTTTTTTAACGATTTTCTTCATGGCCCTTGGCGGAGTAGTTCAAGCCACCCGAACAGCACA
TGGTAGTGAACGCGATGATAATCGTGTTTTGCTCGTTTATGATTCTCAAAATACTGTCGAACAGGGTGAAAAAAAGATTG
ATACCTTACAGCGAATGTTAGCAGGGATGGGACTTAAAGTTAAGACAGTTAAAGAAAGTGAATATCAAAAAGGTGAGTTA
AACCATAGTTATCAAGGGGTAATTACCATGATTAACTGGAAACAAGCGTCACTGGATAATCCAACTTTCGTTAAAGATCG
TAATCAATATGACGGTGTTAAACTTCATATTGGTGAAGGCTTAGATCGAACCGAACAAAAACAGTTACAGGTTAAGCTAA
AGACGATTTATCAACAACAATTCATTTTAAGTGACGATAGCAGTACAGAAATGTTGCCATTTGTGGAACGCATGGATGTT
TTAACTGGAGTTCCAAAACAAGCACAGAGTTACGGCATGTTAAAGACGCAAAATAATGAAGGTCAATCCTATAAGTATGG
GGTAATTAATCAAAAACAAGGTTACTTGCCTTTCTTCAACAATAAAGGACTGGGATTAATTACAGCTAGCAAGATGATAG
CTATTTTATTTAATCGTCAAGAAGAAACCAAACCGTTGTTAACGATTACGGATGTTTCGCCTTATAGTAATCTAAAGCTG
TTAGATCAATTAAGCGTATTCTGTGAAAAGCATGGTATACCATTGGCAATCAGTACTTCCACAGTAGCTAAAAACACGGA
AATGCACGCGTATAAAAGGTTTACCATGTATTTACGTAGACTTGAAGATCGAGGCGGTGTGATTTTCTTACAAGCTCCGG
TGATTGGGGGAGCTACTGCGGATAACGCAGGAGAATTGAGTGAATTATTTGATAACTATCTACTTAATTTGGCACAAAAT
CAAGTTTATCCAGTTGGAATTAGTGCCCAAGGTTTTTGGAATCAGGATCGAGTCTTGAGGAATAGTGCTTTGAAAAAAGC
TAATTATCAGATGCTACTTCCTAATAAAAAAGTAGTTTATCTCGATCAAGATAATCAAGGTGGTACCAATAGCCGAAGTT
ATTTAGCATTACTAGCCTCAAGTTTTAATAAAATTAAACACCAAGCAGATGTACGATTTGCAATGCCCACAGCGCTAACT
TTTAAGATGCCTGATAGTAAGGTTAAGTTGAAAAATTTAAAAGAACAAATTCAAGCGTTGAACTTTGAATGGCAAGCTCC
GGATGAAGCTATTAATTCAAAAATTGATTTTGCAAGTTCATCACTTGCTTTTCAAAATGGACAGTATTTGGTGAATGGTA
AGGAGACGGAAGTTGAAGTTAATTCAAATATGGAAAATACTGATAAGCCAACTCCTACGCCGGCGCTATTTAAAGGCTTT
TTCAGAGTTGAAGGGCAAATTATTACCGTGTTCTTCGCCATTATCTTTACCGTCTTAATCATTTTTATCGCCTTTGGAAG
AAAAATTTACAAGAATATGTTCAAGAGATAG

Upstream 100 bases:

>100_bases
TTATTCATGGTCCCTCTCAGTTTGGACTTTACCTTCATAATGTTTATTTCAGACATTCTAAATCATCAATTATGGCTAAC
TGAACAGGAGGAAGATGGGG

Downstream 100 bases:

>100_bases
GAGGAGTGAATCATCACAATTTTGGATTTTTTCCTAATGGTAGCTATCATTGCCATTTGGGGAACATTAATAATTAATTT
GATTTTAACGGTAGCTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MRKIIMFFLTIFFMALGGVVQATRTAHGSERDDNRVLLVYDSQNTVEQGEKKIDTLQRMLAGMGLKVKTVKESEYQKGEL
NHSYQGVITMINWKQASLDNPTFVKDRNQYDGVKLHIGEGLDRTEQKQLQVKLKTIYQQQFILSDDSSTEMLPFVERMDV
LTGVPKQAQSYGMLKTQNNEGQSYKYGVINQKQGYLPFFNNKGLGLITASKMIAILFNRQEETKPLLTITDVSPYSNLKL
LDQLSVFCEKHGIPLAISTSTVAKNTEMHAYKRFTMYLRRLEDRGGVIFLQAPVIGGATADNAGELSELFDNYLLNLAQN
QVYPVGISAQGFWNQDRVLRNSALKKANYQMLLPNKKVVYLDQDNQGGTNSRSYLALLASSFNKIKHQADVRFAMPTALT
FKMPDSKVKLKNLKEQIQALNFEWQAPDEAINSKIDFASSSLAFQNGQYLVNGKETEVEVNSNMENTDKPTPTPALFKGF
FRVEGQIITVFFAIIFTVLIIFIAFGRKIYKNMFKR

Sequences:

>Translated_516_residues
MRKIIMFFLTIFFMALGGVVQATRTAHGSERDDNRVLLVYDSQNTVEQGEKKIDTLQRMLAGMGLKVKTVKESEYQKGEL
NHSYQGVITMINWKQASLDNPTFVKDRNQYDGVKLHIGEGLDRTEQKQLQVKLKTIYQQQFILSDDSSTEMLPFVERMDV
LTGVPKQAQSYGMLKTQNNEGQSYKYGVINQKQGYLPFFNNKGLGLITASKMIAILFNRQEETKPLLTITDVSPYSNLKL
LDQLSVFCEKHGIPLAISTSTVAKNTEMHAYKRFTMYLRRLEDRGGVIFLQAPVIGGATADNAGELSELFDNYLLNLAQN
QVYPVGISAQGFWNQDRVLRNSALKKANYQMLLPNKKVVYLDQDNQGGTNSRSYLALLASSFNKIKHQADVRFAMPTALT
FKMPDSKVKLKNLKEQIQALNFEWQAPDEAINSKIDFASSSLAFQNGQYLVNGKETEVEVNSNMENTDKPTPTPALFKGF
FRVEGQIITVFFAIIFTVLIIFIAFGRKIYKNMFKR
>Mature_516_residues
MRKIIMFFLTIFFMALGGVVQATRTAHGSERDDNRVLLVYDSQNTVEQGEKKIDTLQRMLAGMGLKVKTVKESEYQKGEL
NHSYQGVITMINWKQASLDNPTFVKDRNQYDGVKLHIGEGLDRTEQKQLQVKLKTIYQQQFILSDDSSTEMLPFVERMDV
LTGVPKQAQSYGMLKTQNNEGQSYKYGVINQKQGYLPFFNNKGLGLITASKMIAILFNRQEETKPLLTITDVSPYSNLKL
LDQLSVFCEKHGIPLAISTSTVAKNTEMHAYKRFTMYLRRLEDRGGVIFLQAPVIGGATADNAGELSELFDNYLLNLAQN
QVYPVGISAQGFWNQDRVLRNSALKKANYQMLLPNKKVVYLDQDNQGGTNSRSYLALLASSFNKIKHQADVRFAMPTALT
FKMPDSKVKLKNLKEQIQALNFEWQAPDEAINSKIDFASSSLAFQNGQYLVNGKETEVEVNSNMENTDKPTPTPALFKGF
FRVEGQIITVFFAIIFTVLIIFIAFGRKIYKNMFKR

Specific function: Unknown

COG id: COG5298

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58530; Mature: 58530

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIIMFFLTIFFMALGGVVQATRTAHGSERDDNRVLLVYDSQNTVEQGEKKIDTLQRML
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
AGMGLKVKTVKESEYQKGELNHSYQGVITMINWKQASLDNPTFVKDRNQYDGVKLHIGEG
HCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEECCCCCCCCEEEEECCC
LDRTEQKQLQVKLKTIYQQQFILSDDSSTEMLPFVERMDVLTGVPKQAQSYGMLKTQNNE
CCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCHHHHHCCCEEECCCC
GQSYKYGVINQKQGYLPFFNNKGLGLITASKMIAILFNRQEETKPLLTITDVSPYSNLKL
CCCEEECCCCCCCCCCCEECCCCCEEEEHHHHHEEEECCCCCCCCEEEEECCCCCCCHHH
LDQLSVFCEKHGIPLAISTSTVAKNTEMHAYKRFTMYLRRLEDRGGVIFLQAPVIGGATA
HHHHHHHHHHCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
DNAGELSELFDNYLLNLAQNQVYPVGISAQGFWNQDRVLRNSALKKANYQMLLPNKKVVY
CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEE
LDQDNQGGTNSRSYLALLASSFNKIKHQADVRFAMPTALTFKMPDSKVKLKNLKEQIQAL
EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCHHHHHHHHHHHHHC
NFEWQAPDEAINSKIDFASSSLAFQNGQYLVNGKETEVEVNSNMENTDKPTPTPALFKGF
CCCCCCCHHHHCCCCCCCCCCEEEECCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHH
FRVEGQIITVFFAIIFTVLIIFIAFGRKIYKNMFKR
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKIIMFFLTIFFMALGGVVQATRTAHGSERDDNRVLLVYDSQNTVEQGEKKIDTLQRML
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
AGMGLKVKTVKESEYQKGELNHSYQGVITMINWKQASLDNPTFVKDRNQYDGVKLHIGEG
HCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEECCCCCCCCEEEEECCC
LDRTEQKQLQVKLKTIYQQQFILSDDSSTEMLPFVERMDVLTGVPKQAQSYGMLKTQNNE
CCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCHHHHHCCCEEECCCC
GQSYKYGVINQKQGYLPFFNNKGLGLITASKMIAILFNRQEETKPLLTITDVSPYSNLKL
CCCEEECCCCCCCCCCCEECCCCCEEEEHHHHHEEEECCCCCCCCEEEEECCCCCCCHHH
LDQLSVFCEKHGIPLAISTSTVAKNTEMHAYKRFTMYLRRLEDRGGVIFLQAPVIGGATA
HHHHHHHHHHCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
DNAGELSELFDNYLLNLAQNQVYPVGISAQGFWNQDRVLRNSALKKANYQMLLPNKKVVY
CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEE
LDQDNQGGTNSRSYLALLASSFNKIKHQADVRFAMPTALTFKMPDSKVKLKNLKEQIQAL
EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCHHHHHHHHHHHHHC
NFEWQAPDEAINSKIDFASSSLAFQNGQYLVNGKETEVEVNSNMENTDKPTPTPALFKGF
CCCCCCCHHHHCCCCCCCCCCEEEECCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHH
FRVEGQIITVFFAIIFTVLIIFIAFGRKIYKNMFKR
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA