| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492114
Identifier: 116492114
GI number: 116492114
Start: 354837
End: 355166
Strand: Direct
Name: 116492114
Synonym: PEPE_0310
Alternate gene names: NA
Gene position: 354837-355166 (Clockwise)
Preceding gene: 116492112
Following gene: 116492115
Centisome position: 19.36
GC content: 37.88
Gene sequence:
>330_bases ATGGCATTTATTCAAATTCCACATGACATGACAGAACTACGGATTATGATGGAACAACTAAAAGAAATGGGTAAAGAGGC TAATGAGGATCAACTTATCGAACAAGCAGTGGTCGATAACGCGCAACAGTTGTTAGATGAAGCGCTTGATGGACACTACT TTACCTGTAAGTTAGAAGATGGAAAATTAGTCGTTTATGATGTGATCAATTTACCAACTGGAAGTATCGAACCATTAGGT AAAAACTTTAAGGAAGACTTTATTACTGACGCGGATAACCTTTGGATTCATCTTTCAAGTAATTTAAACCGAATTGCGGG CGGACGTTAG
Upstream 100 bases:
>100_bases ATAACATAATTAAAAAATCCCTTCACAATTGTTTAACTACTATTCTAACTCAAAATTAATGGTAAAATTACATTTAGTAA ATAAAATGGAGGACATTAAA
Downstream 100 bases:
>100_bases TTAATAGGAGGAACCGATGAGTATTCAATTAATTGCAAGTGATATTGATGGAACTTTTTTGAATGACCAACGTGATTTTG ATCATGCTCGTTTTCAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MAFIQIPHDMTELRIMMEQLKEMGKEANEDQLIEQAVVDNAQQLLDEALDGHYFTCKLEDGKLVVYDVINLPTGSIEPLG KNFKEDFITDADNLWIHLSSNLNRIAGGR
Sequences:
>Translated_109_residues MAFIQIPHDMTELRIMMEQLKEMGKEANEDQLIEQAVVDNAQQLLDEALDGHYFTCKLEDGKLVVYDVINLPTGSIEPLG KNFKEDFITDADNLWIHLSSNLNRIAGGR >Mature_108_residues AFIQIPHDMTELRIMMEQLKEMGKEANEDQLIEQAVVDNAQQLLDEALDGHYFTCKLEDGKLVVYDVINLPTGSIEPLGK NFKEDFITDADNLWIHLSSNLNRIAGGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12376; Mature: 12245
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFIQIPHDMTELRIMMEQLKEMGKEANEDQLIEQAVVDNAQQLLDEALDGHYFTCKLED CCEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC GKLVVYDVINLPTGSIEPLGKNFKEDFITDADNLWIHLSSNLNRIAGGR CCEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure AFIQIPHDMTELRIMMEQLKEMGKEANEDQLIEQAVVDNAQQLLDEALDGHYFTCKLED CEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC GKLVVYDVINLPTGSIEPLGKNFKEDFITDADNLWIHLSSNLNRIAGGR CCEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA