Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is yfgM [C]
Identifier: 116515307
GI number: 116515307
Start: 415734
End: 416225
Strand: Reverse
Name: yfgM [C]
Synonym: BCc_397
Alternate gene names: 116515307
Gene position: 416225-415734 (Counterclockwise)
Preceding gene: NA
Following gene: 116515306
Centisome position: 99.96
GC content: 12.6
Gene sequence:
>492_bases ATGTTTGATATAAAAATAAAGAAATTTAATATAAAAAAAAAAATTTTCATAATTCTCTTTATCTTATTTTCGTTATTAAC CTGTACATTTTTAACAATAAGATATATAAATAAAAGAAAAATTGAAATAACAAGAAAAGAATTTAAAAAAATAGTAGATG ATTTTAAAATAAAAAAAAATGATTTAATTAAAAAAGAAAAATTATTTTTCAAAAAACAAAATAATATATATAGTCATTTG ATTGGATTAAATTTAGCAAAAAATTTATTTTTTAAAAAAAAATATAAAGAATCCATAAAAATTTTAAAAGAAATTTTGGT TTCTACTTCAGATATAAATTTAATTAATTTTATTAAATTAAATTTAGTAAAAATATATATTAAAAAAAAAAAATTTTCTT TAGCATTAAAAATAATTCATCATATAGATGATGATATTTGGAAATCTTTATTTAATAAATATAAAAAGTATATTACTTCT CATATGAGATAA
Upstream 100 bases:
>100_bases TTTATATATAGATTAATAAATTAAAAATAAAAATTGAATTTATTAAATTTTATGTTATGCTAGTAAATAAAAATATGACT ATTCTTGAAAAGAAATTTAA
Downstream 100 bases:
>100_bases TTTTAATGATTTTAAATATTGCTTTGATTGGTAAATCTAATGTAGGTAAATCTAGTTTATTTAATTTATTAACTAATTCT AAATCTGCATTAACTAGTGA
Product: YfgM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MFDIKIKKFNIKKKIFIILFILFSLLTCTFLTIRYINKRKIEITRKEFKKIVDDFKIKKNDLIKKEKLFFKKQNNIYSHL IGLNLAKNLFFKKKYKESIKILKEILVSTSDINLINFIKLNLVKIYIKKKKFSLALKIIHHIDDDIWKSLFNKYKKYITS HMR
Sequences:
>Translated_163_residues MFDIKIKKFNIKKKIFIILFILFSLLTCTFLTIRYINKRKIEITRKEFKKIVDDFKIKKNDLIKKEKLFFKKQNNIYSHL IGLNLAKNLFFKKKYKESIKILKEILVSTSDINLINFIKLNLVKIYIKKKKFSLALKIIHHIDDDIWKSLFNKYKKYITS HMR >Mature_163_residues MFDIKIKKFNIKKKIFIILFILFSLLTCTFLTIRYINKRKIEITRKEFKKIVDDFKIKKNDLIKKEKLFFKKQNNIYSHL IGLNLAKNLFFKKKYKESIKILKEILVSTSDINLINFIKLNLVKIYIKKKKFSLALKIIHHIDDDIWKSLFNKYKKYITS HMR
Specific function: Unknown
COG id: COG2976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19854; Mature: 19854
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDIKIKKFNIKKKIFIILFILFSLLTCTFLTIRYINKRKIEITRKEFKKIVDDFKIKKN CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH DLIKKEKLFFKKQNNIYSHLIGLNLAKNLFFKKKYKESIKILKEILVSTSDINLINFIKL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH NLVKIYIKKKKFSLALKIIHHIDDDIWKSLFNKYKKYITSHMR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFDIKIKKFNIKKKIFIILFILFSLLTCTFLTIRYINKRKIEITRKEFKKIVDDFKIKKN CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH DLIKKEKLFFKKQNNIYSHLIGLNLAKNLFFKKKYKESIKILKEILVSTSDINLINFIKL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH NLVKIYIKKKKFSLALKIIHHIDDDIWKSLFNKYKKYITSHMR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA