Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is engA [H]
Identifier: 116515306
GI number: 116515306
Start: 414379
End: 415728
Strand: Reverse
Name: engA [H]
Synonym: BCc_396
Alternate gene names: 116515306
Gene position: 415728-414379 (Counterclockwise)
Preceding gene: 116515307
Following gene: 116515300
Centisome position: 99.84
GC content: 18.0
Gene sequence:
>1350_bases ATGATTTTAAATATTGCTTTGATTGGTAAATCTAATGTAGGTAAATCTAGTTTATTTAATTTATTAACTAATTCTAAATC TGCATTAACTAGTGACTTACCATCCACTACTCGTGATAGACAATATGGTTTTTTAAAGATTAAAGAAAAAAAAATTAATA TTATTGATACTGCTGGTATTAATAATATAAAAAGAAAATTTTTTAATTTAATTGAAAAACAAGCATACAAACAAACTATT CTTGCTATACAGGAATTTCATTTAATTTTTTTTTTAGTTGATGCCCGTTATGAACTAACAATAGTAGATTATTTTATTTT AAAATTGATTAGAAAAGAAAATAAGAATATTTTTTTATTAATTAATAAAATTGATTTAATGAAAAGAGAAAATTCTTTCA TAGATTTTTATAATTTAGGAATAAAGAATATTTTTAAAATATCAGTTATCCATAAAATTGGATATTTAAATCTTTTAAAA AATATATATAATTTTCTTAAAAAAAGAGAGAAAAAAATATTTTTAGAAAATAATAAAATAAACAAATATATTAATATAAA AATTTGTTTTTTAGGAAAAACTAATGCTGGAAAATCAACATTAATTAATAGTTTATTAAATTCTAATAGAGTAATAACAA GTTCTACAAAAAATACTACTCGAGATATGATTGAAATATCATTAATTAATAAGAAGATAAAATATATTTTTACTGATACA GCTGGCATAAATAAAAAAAGAAAAAAAAAAGATTTTTTAAATTATATTTTTGAAAAAAAATCATTTGATGTTGTTAAAAA AAATCAAATAGCAATTATTGTTATTGATTCTTATGTTGGAATTAGTTCAAAAGATTTATCTATTATTACATTTTTGATTA ATCAAAATGTTGCTTTTTTTATTATTTTTAATAAATGGGATTTAATTTCTAAAGAAAGAAAAAAAAAAATAAAGCAGGAA AATAAATATCGTTTAAAATTTATTAGAAATATAAAAATAATATATTTATCTGCAATCAAAAAAACAAATTTAAAAAAAAT ATTTCTTCAAATAAAAATTATTTACAATGAATCAAAAAAAATATTTAGTACTTCATCTTTAATTAAGATAATTAACAAAG CTACTAAAAAACACTCATTACCAATGGGTGTAACGGGAAAAATAATAAAATTAAAATACGCTCATCTTGGAAGAAAAAAT CCAATATTTATTATTATACATGGAACACAAGTGCAATATATTTCGCAGACGTATAAAAAATATTTAATACGATTTTTACA AAAAGAATTAAAAATCCCGAATACACCCATCAAATTATTTTTTAAAAATAAAAAAAATCCATATACATAA
Upstream 100 bases:
>100_bases CTTTAGCATTAAAAATAATTCATCATATAGATGATGATATTTGGAAATCTTTATTTAATAAATATAAAAAGTATATTACT TCTCATATGAGATAATTTTA
Downstream 100 bases:
>100_bases ATATTATATATTTATTTTTTTTCACTACTACGATTAACATGATATAATGGAATTTCAACTTCGATATCTTTCGTTCCCAG TCGTGCTTGACATCCTAATC
Product: EngA
Products: NA
Alternate protein names: GTP-binding protein EngA [H]
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MILNIALIGKSNVGKSSLFNLLTNSKSALTSDLPSTTRDRQYGFLKIKEKKINIIDTAGINNIKRKFFNLIEKQAYKQTI LAIQEFHLIFFLVDARYELTIVDYFILKLIRKENKNIFLLINKIDLMKRENSFIDFYNLGIKNIFKISVIHKIGYLNLLK NIYNFLKKREKKIFLENNKINKYINIKICFLGKTNAGKSTLINSLLNSNRVITSSTKNTTRDMIEISLINKKIKYIFTDT AGINKKRKKKDFLNYIFEKKSFDVVKKNQIAIIVIDSYVGISSKDLSIITFLINQNVAFFIIFNKWDLISKERKKKIKQE NKYRLKFIRNIKIIYLSAIKKTNLKKIFLQIKIIYNESKKIFSTSSLIKIINKATKKHSLPMGVTGKIIKLKYAHLGRKN PIFIIIHGTQVQYISQTYKKYLIRFLQKELKIPNTPIKLFFKNKKNPYT
Sequences:
>Translated_449_residues MILNIALIGKSNVGKSSLFNLLTNSKSALTSDLPSTTRDRQYGFLKIKEKKINIIDTAGINNIKRKFFNLIEKQAYKQTI LAIQEFHLIFFLVDARYELTIVDYFILKLIRKENKNIFLLINKIDLMKRENSFIDFYNLGIKNIFKISVIHKIGYLNLLK NIYNFLKKREKKIFLENNKINKYINIKICFLGKTNAGKSTLINSLLNSNRVITSSTKNTTRDMIEISLINKKIKYIFTDT AGINKKRKKKDFLNYIFEKKSFDVVKKNQIAIIVIDSYVGISSKDLSIITFLINQNVAFFIIFNKWDLISKERKKKIKQE NKYRLKFIRNIKIIYLSAIKKTNLKKIFLQIKIIYNESKKIFSTSSLIKIINKATKKHSLPMGVTGKIIKLKYAHLGRKN PIFIIIHGTQVQYISQTYKKYLIRFLQKELKIPNTPIKLFFKNKKNPYT >Mature_449_residues MILNIALIGKSNVGKSSLFNLLTNSKSALTSDLPSTTRDRQYGFLKIKEKKINIIDTAGINNIKRKFFNLIEKQAYKQTI LAIQEFHLIFFLVDARYELTIVDYFILKLIRKENKNIFLLINKIDLMKRENSFIDFYNLGIKNIFKISVIHKIGYLNLLK NIYNFLKKREKKIFLENNKINKYINIKICFLGKTNAGKSTLINSLLNSNRVITSSTKNTTRDMIEISLINKKIKYIFTDT AGINKKRKKKDFLNYIFEKKSFDVVKKNQIAIIVIDSYVGISSKDLSIITFLINQNVAFFIIFNKWDLISKERKKKIKQE NKYRLKFIRNIKIIYLSAIKKTNLKKIFLQIKIIYNESKKIFSTSSLIKIINKATKKHSLPMGVTGKIIKLKYAHLGRKN PIFIIIHGTQVQYISQTYKKYLIRFLQKELKIPNTPIKLFFKNKKNPYT
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis [H]
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain [H]
Homologues:
Organism=Escherichia coli, GI87082120, Length=470, Percent_Identity=33.8297872340426, Blast_Score=317, Evalue=1e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 52678; Mature: 52678
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILNIALIGKSNVGKSSLFNLLTNSKSALTSDLPSTTRDRQYGFLKIKEKKINIIDTAGI CEEEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEECEEEEEECCCC NNIKRKFFNLIEKQAYKQTILAIQEFHLIFFLVDARYELTIVDYFILKLIRKENKNIFLL CHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEEHHHHHHHHHHHHCCCCEEEE INKIDLMKRENSFIDFYNLGIKNIFKISVIHKIGYLNLLKNIYNFLKKREKKIFLENNKI EEEEEHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC NKYINIKICFLGKTNAGKSTLINSLLNSNRVITSSTKNTTRDMIEISLINKKIKYIFTDT CEEEEEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHEEEEEECCEEEEEEECC AGINKKRKKKDFLNYIFEKKSFDVVKKNQIAIIVIDSYVGISSKDLSIITFLINQNVAFF CCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCCCCCCCEEEEEEECCCEEEE IIFNKWDLISKERKKKIKQENKYRLKFIRNIKIIYLSAIKKTNLKKIFLQIKIIYNESKK EEEECCCHHHHHHHHHHHHCCCEEEEHHHCEEEEEEEEHHHCCCEEEEEEEEEEEECCCC IFSTSSLIKIINKATKKHSLPMGVTGKIIKLKYAHLGRKNPIFIIIHGTQVQYISQTYKK HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHCCCCCCEEEEEECCCHHHHHHHHHH YLIRFLQKELKIPNTPIKLFFKNKKNPYT HHHHHHHHHHCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MILNIALIGKSNVGKSSLFNLLTNSKSALTSDLPSTTRDRQYGFLKIKEKKINIIDTAGI CEEEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEECEEEEEECCCC NNIKRKFFNLIEKQAYKQTILAIQEFHLIFFLVDARYELTIVDYFILKLIRKENKNIFLL CHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEEHHHHHHHHHHHHCCCCEEEE INKIDLMKRENSFIDFYNLGIKNIFKISVIHKIGYLNLLKNIYNFLKKREKKIFLENNKI EEEEEHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC NKYINIKICFLGKTNAGKSTLINSLLNSNRVITSSTKNTTRDMIEISLINKKIKYIFTDT CEEEEEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHEEEEEECCEEEEEEECC AGINKKRKKKDFLNYIFEKKSFDVVKKNQIAIIVIDSYVGISSKDLSIITFLINQNVAFF CCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCCCCCCCEEEEEEECCCEEEE IIFNKWDLISKERKKKIKQENKYRLKFIRNIKIIYLSAIKKTNLKKIFLQIKIIYNESKK EEEECCCHHHHHHHHHHHHCCCEEEEHHHCEEEEEEEEHHHCCCEEEEEEEEEEEECCCC IFSTSSLIKIINKATKKHSLPMGVTGKIIKLKYAHLGRKNPIFIIIHGTQVQYISQTYKK HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHCCCCCCEEEEEECCCHHHHHHHHHH YLIRFLQKELKIPNTPIKLFFKNKKNPYT HHHHHHHHHHCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA