Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is ilvC [H]
Identifier: 116515299
GI number: 116515299
Start: 406239
End: 407711
Strand: Reverse
Name: ilvC [H]
Synonym: BCc_388
Alternate gene names: 116515299
Gene position: 407711-406239 (Counterclockwise)
Preceding gene: 116515300
Following gene: 116515298
Centisome position: 97.92
GC content: 24.37
Gene sequence:
>1473_bases ATGAAAAATTTTTTTAATAAACTTTCTTTTAGAGAAAAATTAATAGAATTAAATACTGGTTTTTTAATGAATTCAAATGA ATTTCTACATTCAAAAAAGAAATTAAAAAACAAAAAAATTGTTATAATAGGATGTGGAGCTCAAGGATTAAATCAAGGAT TGAATTTAAGAGATTCTGGATTTAATGTTACTTATGCTTTACGAAAAAAATCAATAGAAAATAAATCTATTTCTTGGAAA AATGCTATTAGAGAAAAATTTTTTGTAGATACATATGAAAATTTAGTTCCTAGTGCAGATTTAGTAATTAATTTAACTCC TGACAAACAACATTCTGTTGTAGTAAAAAAATTACAAAAATTAATGAAAAAAAATTCTGTTTTAGGATATTCACATGGTT TTAATATTGTAGAAATAGGAGAAGAAATTCGATCTGATATTACTGTTATCATGGTAGCACCTAAATGTCCGGGTACTGAA GTTAGAAAAGAATTTTTAAAAGGTTTCGGTGTTCCAACATTAATTGCTGTACATAAAAAAAATGATCCTAAAAAAATAGG ATTAGATATTGCTAAAGCCTGGGCTACAGGATTAGGATCACATAAAGCAGGAATATTAAAATCTTCTTTTATTGCGGAAG TTAAATCTGATTTAATGGGTGAACAAACTATTTTATGTGGTATGTTACAAGCTTGTTCTTTAGTTTGTTTTAATCATTTA ATTGAAAAAGGATATAGTTCTGATTTTTCAGCGACTTTGTTACAGTTTGGTTGGGAAAAATTAGCTGAATGTATGAAAGA AGGTGGAATAACACTTTTATTTAATAGATTATCAATTTCATCTAAAATTCGTGCATATAAATTATCTATAGTATTAAAAT CTTTATTAAGACCTTTATTTTGTTTACATATGGATAATATTATTTCTGGTGATTTTTCCAAAAATATGATAGCTGATTGG AATAATTCTGATATTCAGTTATATAACTGGAGAAAGAAATTAAAGAAATCTCATTTTGAAAATTCTAATTTATATTCTAA TAGAAAAATTTTAGATCATGAATATTTTGAAAAATGTACATTAATGGCTGCTATGTTAAAAGATTTGAAACTATGTATTA ATACTGGAATTACTTCTGCTTCAGCATATTATGAATCTTTACATGAACTTCCTTTAATTGCAAATACTATTTCTAGAAAA AGATTATATGAAATGAATCTTGTTATATCTGATACTGCAGAATATGGAAGTCATTTATTTTCTGAAAGAGCAATTTCAAT TTTAAATAAATTTTTAAAATCTATTAATAGTGATGATTTAGGTGAAACAATTCGAGATACAAATATTACTAATTCAGAAT TATTATATGTAAATGATATGATAGAAAATCATCATATTGAAAGAATTGGAAAAAAATTGCGTTTATATATGACTAATATG AAACGTACAGCATTGCATGATTGTAAAAACTAA
Upstream 100 bases:
>100_bases CAACTAGTGCAGATAAGGGTGCAGTAAGAAATATACATAAAATAAATTTTTAATATTTTAAATATATAAATTTTTCTACA TTATCAAAAGGACAAATTAT
Downstream 100 bases:
>100_bases TTACATATAATTATTTATATTATTTTTAATAAAAATTAATTTTATTATAAATTTTTTTTATTTTTTATGTTTTTTATATT TTAATTTTAAAAAATTATTA
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase [H]
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MKNFFNKLSFREKLIELNTGFLMNSNEFLHSKKKLKNKKIVIIGCGAQGLNQGLNLRDSGFNVTYALRKKSIENKSISWK NAIREKFFVDTYENLVPSADLVINLTPDKQHSVVVKKLQKLMKKNSVLGYSHGFNIVEIGEEIRSDITVIMVAPKCPGTE VRKEFLKGFGVPTLIAVHKKNDPKKIGLDIAKAWATGLGSHKAGILKSSFIAEVKSDLMGEQTILCGMLQACSLVCFNHL IEKGYSSDFSATLLQFGWEKLAECMKEGGITLLFNRLSISSKIRAYKLSIVLKSLLRPLFCLHMDNIISGDFSKNMIADW NNSDIQLYNWRKKLKKSHFENSNLYSNRKILDHEYFEKCTLMAAMLKDLKLCINTGITSASAYYESLHELPLIANTISRK RLYEMNLVISDTAEYGSHLFSERAISILNKFLKSINSDDLGETIRDTNITNSELLYVNDMIENHHIERIGKKLRLYMTNM KRTALHDCKN
Sequences:
>Translated_490_residues MKNFFNKLSFREKLIELNTGFLMNSNEFLHSKKKLKNKKIVIIGCGAQGLNQGLNLRDSGFNVTYALRKKSIENKSISWK NAIREKFFVDTYENLVPSADLVINLTPDKQHSVVVKKLQKLMKKNSVLGYSHGFNIVEIGEEIRSDITVIMVAPKCPGTE VRKEFLKGFGVPTLIAVHKKNDPKKIGLDIAKAWATGLGSHKAGILKSSFIAEVKSDLMGEQTILCGMLQACSLVCFNHL IEKGYSSDFSATLLQFGWEKLAECMKEGGITLLFNRLSISSKIRAYKLSIVLKSLLRPLFCLHMDNIISGDFSKNMIADW NNSDIQLYNWRKKLKKSHFENSNLYSNRKILDHEYFEKCTLMAAMLKDLKLCINTGITSASAYYESLHELPLIANTISRK RLYEMNLVISDTAEYGSHLFSERAISILNKFLKSINSDDLGETIRDTNITNSELLYVNDMIENHHIERIGKKLRLYMTNM KRTALHDCKN >Mature_490_residues MKNFFNKLSFREKLIELNTGFLMNSNEFLHSKKKLKNKKIVIIGCGAQGLNQGLNLRDSGFNVTYALRKKSIENKSISWK NAIREKFFVDTYENLVPSADLVINLTPDKQHSVVVKKLQKLMKKNSVLGYSHGFNIVEIGEEIRSDITVIMVAPKCPGTE VRKEFLKGFGVPTLIAVHKKNDPKKIGLDIAKAWATGLGSHKAGILKSSFIAEVKSDLMGEQTILCGMLQACSLVCFNHL IEKGYSSDFSATLLQFGWEKLAECMKEGGITLLFNRLSISSKIRAYKLSIVLKSLLRPLFCLHMDNIISGDFSKNMIADW NNSDIQLYNWRKKLKKSHFENSNLYSNRKILDHEYFEKCTLMAAMLKDLKLCINTGITSASAYYESLHELPLIANTISRK RLYEMNLVISDTAEYGSHLFSERAISILNKFLKSINSDDLGETIRDTNITNSELLYVNDMIENHHIERIGKKLRLYMTNM KRTALHDCKN
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family [H]
Homologues:
Organism=Escherichia coli, GI1790210, Length=490, Percent_Identity=57.7551020408163, Blast_Score=593, Evalue=1e-171, Organism=Saccharomyces cerevisiae, GI6323387, Length=275, Percent_Identity=31.6363636363636, Blast_Score=97, Evalue=5e-21,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - InterPro: IPR014359 - InterPro: IPR016040 [H]
Pfam domain/function: PF01450 IlvC; PF07991 IlvN [H]
EC number: =1.1.1.86 [H]
Molecular weight: Translated: 55733; Mature: 55733
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFFNKLSFREKLIELNTGFLMNSNEFLHSKKKLKNKKIVIIGCGAQGLNQGLNLRDSG CCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCCCC FNVTYALRKKSIENKSISWKNAIREKFFVDTYENLVPSADLVINLTPDKQHSVVVKKLQK CCEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH LMKKNSVLGYSHGFNIVEIGEEIRSDITVIMVAPKCPGTEVRKEFLKGFGVPTLIAVHKK HHHHCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECC NDPKKIGLDIAKAWATGLGSHKAGILKSSFIAEVKSDLMGEQTILCGMLQACSLVCFNHL CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IEKGYSSDFSATLLQFGWEKLAECMKEGGITLLFNRLSISSKIRAYKLSIVLKSLLRPLF HHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH CLHMDNIISGDFSKNMIADWNNSDIQLYNWRKKLKKSHFENSNLYSNRKILDHEYFEKCT HHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH LMAAMLKDLKLCINTGITSASAYYESLHELPLIANTISRKRLYEMNLVISDTAEYGSHLF HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECHHHHHHHHH SERAISILNKFLKSINSDDLGETIRDTNITNSELLYVNDMIENHHIERIGKKLRLYMTNM HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH KRTALHDCKN HHHHHHHCCC >Mature Secondary Structure MKNFFNKLSFREKLIELNTGFLMNSNEFLHSKKKLKNKKIVIIGCGAQGLNQGLNLRDSG CCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCCCC FNVTYALRKKSIENKSISWKNAIREKFFVDTYENLVPSADLVINLTPDKQHSVVVKKLQK CCEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH LMKKNSVLGYSHGFNIVEIGEEIRSDITVIMVAPKCPGTEVRKEFLKGFGVPTLIAVHKK HHHHCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECC NDPKKIGLDIAKAWATGLGSHKAGILKSSFIAEVKSDLMGEQTILCGMLQACSLVCFNHL CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IEKGYSSDFSATLLQFGWEKLAECMKEGGITLLFNRLSISSKIRAYKLSIVLKSLLRPLF HHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH CLHMDNIISGDFSKNMIADWNNSDIQLYNWRKKLKKSHFENSNLYSNRKILDHEYFEKCT HHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH LMAAMLKDLKLCINTGITSASAYYESLHELPLIANTISRKRLYEMNLVISDTAEYGSHLF HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECHHHHHHHHH SERAISILNKFLKSINSDDLGETIRDTNITNSELLYVNDMIENHHIERIGKKLRLYMTNM HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH KRTALHDCKN HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10555290 [H]