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The map label for this gene is secY [H]

Identifier: 116515239

GI number: 116515239

Start: 358687

End: 359982

Strand: Reverse

Name: secY [H]

Synonym: BCc_321

Alternate gene names: 116515239

Gene position: 359982-358687 (Counterclockwise)

Preceding gene: 116515240

Following gene: 116515238

Centisome position: 86.46

GC content: 21.22

Gene sequence:

>1296_bases
ATGTCTACATTATATAATTTACGAAAAAGAATTTTTTTTGTTTTTATAGCAATAATGATATTTAGAATAGGTTCATTCAT
TCCTATTCCAGGTATTAACATACAAGTTTTAGAAAAATTTTTTATTTATAAAAATAGTTCTATATTAACTATGTTTAATA
TGTTTTCAGGAGGATCATTAAATAGAGCTTCAATATTTGCTTTAGGTGTAATGCCATATATTTCTTCTTCTATAATAGTA
CAATTATTAACATTGATTAGTTCATATTTACGTAATTTAAAAAAAGAAGGAGATATAGGAAAAAAAACAATTAATCAATA
TACAAAATATATTACATTTTTTCTTTCAATTATACAATCAATTGGAGTAGTAATTAGTTTACCATTTCTTCCTGGAATGA
AAAATATTATAGTTTTTGCAGATTGTTATTTTTATATTATTGCGGTTGTTAGTTTAGTTACCGGTACTATATTTTTAATG
TGGTTAGGAGAACTTATTACTACTAAAGGTGTAGGTAATGGAGTTTCTTTAATTATTTTTTCAGGTATAATATCTGGTTT
ACCAGCTTCTGTTATAAGAACTTATAAATTAATAAAAATTAAAAATTTTAGTTTTCTTTATGTTTTTTTTCTTCTATTAA
TTATTTTTTTTGTAATTTTTATTGTAGTTTTTATAGAAAAAAGTCAACGTAAAATTATTGTATGTTATGCTCGACGTCAA
CAAGGTAGACGAATGTATACTGCGCATCATAGTTATTTACCATTAAAATTAAATATGGCTGGAGTAATACCTGTTATTTT
TTCATCTAGTTTAATTGTTTTCCCATCAATACTTTTAACTTATTTGCGTTATGTTTTTAACGATTATAAAAAAATAATAT
ATTTTTTTGATTTTTTAAAATTTAAACATAGTATTTATTTAATTGTAAATATTATCTTAATAATATTTTTTTGTTTTTTT
TATACTAATATAATTTTTAATGTTCAAGATACTGCTAATAATTTAAAAAAATCTGGAGCTTTTCTTCCTGGAATTAGACC
GGGTTTAAAGACTGCAGAATATATTAAAAATATTGTTTTTAAATTAACAACTATTGGTTCAATATATACTGTATTTATTT
GTTTAATTCCTGATATTGTACGTTACTTTTTTAAAGTACCTTTTAATTTTGGTGGTACTTCTTTATTAATTGTAGTAGTT
GTTTTAATAGAATTTATTACGCAAACACAAACATTAATGATGTCAACTCAATATAAAAAAATATTAAAAAAATCACATTT
ATATTTAAAAAATTAA

Upstream 100 bases:

>100_bases
TAAGGGAGCTCGTTTATGTATAGAATCAGCTGGAGGAGTAGTTAAAAGTTAAAAATATAATTATTTATTTAAACAATTCA
TTTTTAATAGAAAATATACT

Downstream 100 bases:

>100_bases
AAATTATATATTTTTATGTTAATTTTGGAGAAGTAATGAAAGTTCGAGCTTCAGTAAAAAAGATATGTCGTAATTGTAAG
ATTATTCGTAGAAAAAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MSTLYNLRKRIFFVFIAIMIFRIGSFIPIPGINIQVLEKFFIYKNSSILTMFNMFSGGSLNRASIFALGVMPYISSSIIV
QLLTLISSYLRNLKKEGDIGKKTINQYTKYITFFLSIIQSIGVVISLPFLPGMKNIIVFADCYFYIIAVVSLVTGTIFLM
WLGELITTKGVGNGVSLIIFSGIISGLPASVIRTYKLIKIKNFSFLYVFFLLLIIFFVIFIVVFIEKSQRKIIVCYARRQ
QGRRMYTAHHSYLPLKLNMAGVIPVIFSSSLIVFPSILLTYLRYVFNDYKKIIYFFDFLKFKHSIYLIVNIILIIFFCFF
YTNIIFNVQDTANNLKKSGAFLPGIRPGLKTAEYIKNIVFKLTTIGSIYTVFICLIPDIVRYFFKVPFNFGGTSLLIVVV
VLIEFITQTQTLMMSTQYKKILKKSHLYLKN

Sequences:

>Translated_431_residues
MSTLYNLRKRIFFVFIAIMIFRIGSFIPIPGINIQVLEKFFIYKNSSILTMFNMFSGGSLNRASIFALGVMPYISSSIIV
QLLTLISSYLRNLKKEGDIGKKTINQYTKYITFFLSIIQSIGVVISLPFLPGMKNIIVFADCYFYIIAVVSLVTGTIFLM
WLGELITTKGVGNGVSLIIFSGIISGLPASVIRTYKLIKIKNFSFLYVFFLLLIIFFVIFIVVFIEKSQRKIIVCYARRQ
QGRRMYTAHHSYLPLKLNMAGVIPVIFSSSLIVFPSILLTYLRYVFNDYKKIIYFFDFLKFKHSIYLIVNIILIIFFCFF
YTNIIFNVQDTANNLKKSGAFLPGIRPGLKTAEYIKNIVFKLTTIGSIYTVFICLIPDIVRYFFKVPFNFGGTSLLIVVV
VLIEFITQTQTLMMSTQYKKILKKSHLYLKN
>Mature_430_residues
STLYNLRKRIFFVFIAIMIFRIGSFIPIPGINIQVLEKFFIYKNSSILTMFNMFSGGSLNRASIFALGVMPYISSSIIVQ
LLTLISSYLRNLKKEGDIGKKTINQYTKYITFFLSIIQSIGVVISLPFLPGMKNIIVFADCYFYIIAVVSLVTGTIFLMW
LGELITTKGVGNGVSLIIFSGIISGLPASVIRTYKLIKIKNFSFLYVFFLLLIIFFVIFIVVFIEKSQRKIIVCYARRQQ
GRRMYTAHHSYLPLKLNMAGVIPVIFSSSLIVFPSILLTYLRYVFNDYKKIIYFFDFLKFKHSIYLIVNIILIIFFCFFY
TNIIFNVQDTANNLKKSGAFLPGIRPGLKTAEYIKNIVFKLTTIGSIYTVFICLIPDIVRYFFKVPFNFGGTSLLIVVVV
LIEFITQTQTLMMSTQYKKILKKSHLYLKN

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=424, Percent_Identity=52.5943396226415, Blast_Score=432, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49549; Mature: 49418

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLYNLRKRIFFVFIAIMIFRIGSFIPIPGINIQVLEKFFIYKNSSILTMFNMFSGGSL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHCCCCCC
NRASIFALGVMPYISSSIIVQLLTLISSYLRNLKKEGDIGKKTINQYTKYITFFLSIIQS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IGVVISLPFLPGMKNIIVFADCYFYIIAVVSLVTGTIFLMWLGELITTKGVGNGVSLIIF
HHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SGIISGLPASVIRTYKLIKIKNFSFLYVFFLLLIIFFVIFIVVFIEKSQRKIIVCYARRQ
HHHHHCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHH
QGRRMYTAHHSYLPLKLNMAGVIPVIFSSSLIVFPSILLTYLRYVFNDYKKIIYFFDFLK
CCCEEEEECCCCCEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKHSIYLIVNIILIIFFCFFYTNIIFNVQDTANNLKKSGAFLPGIRPGLKTAEYIKNIVF
HHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
KLTTIGSIYTVFICLIPDIVRYFFKVPFNFGGTSLLIVVVVLIEFITQTQTLMMSTQYKK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKKSHLYLKN
HHHHCCCCCCC
>Mature Secondary Structure 
STLYNLRKRIFFVFIAIMIFRIGSFIPIPGINIQVLEKFFIYKNSSILTMFNMFSGGSL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHCCCCCC
NRASIFALGVMPYISSSIIVQLLTLISSYLRNLKKEGDIGKKTINQYTKYITFFLSIIQS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IGVVISLPFLPGMKNIIVFADCYFYIIAVVSLVTGTIFLMWLGELITTKGVGNGVSLIIF
HHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SGIISGLPASVIRTYKLIKIKNFSFLYVFFLLLIIFFVIFIVVFIEKSQRKIIVCYARRQ
HHHHHCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHH
QGRRMYTAHHSYLPLKLNMAGVIPVIFSSSLIVFPSILLTYLRYVFNDYKKIIYFFDFLK
CCCEEEEECCCCCEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKHSIYLIVNIILIIFFCFFYTNIIFNVQDTANNLKKSGAFLPGIRPGLKTAEYIKNIVF
HHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
KLTTIGSIYTVFICLIPDIVRYFFKVPFNFGGTSLLIVVVVLIEFITQTQTLMMSTQYKK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKKSHLYLKN
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9322765; 10952301 [H]