| Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
|---|---|
| Accession | NC_008513 |
| Length | 416,380 |
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The map label for this gene is deaD [H]
Identifier: 116515159
GI number: 116515159
Start: 260602
End: 262332
Strand: Reverse
Name: deaD [H]
Synonym: BCc_226
Alternate gene names: 116515159
Gene position: 262332-260602 (Counterclockwise)
Preceding gene: 116515160
Following gene: 116515156
Centisome position: 63.0
GC content: 25.48
Gene sequence:
>1731_bases ATGACACAAATTCATCTCTCATTTTCTGTTTTTGGATTAAATTCTTTTTTATTAAAATCTCTTAAAATATTAGGTTATGA AAAACCTTCTCCTATTCAATCTGCTTGTATTCCTTATTTATTATCAGGAAAAGATGTTTTAGGAATGGCTCAAACAGGTA GTGGAAAAACTGCAGCTTTTGCTTTACCTTTATTAAATAATATTAATATTTCTTTAAAATTTCCACAAATTTTAGTATTA GTTCCTACACGTGAATTAGCTGTACAAGTAGCTAAATCATTTTCTGATTTTTCTAAATATTTAATAGGAACACAAGTATT AGCTTTATATGGTGGTCAAAGATATGAAATACAGTTACATGCATTACGAAGAGGTCCTCAAATTATTGTAGGAACACCAG GTAGATTATTAGATCATTTAAAAAGAGGAACTTTAAGTTTAATTCATCTTTCTAGTCTTGTTTTAGATGAAGCTGATGAA ATGTTACGTATGGGTTTTATAGAAGATGTTGAAACTATAATGTCAAAAATACCTCGAAAACATCAGACAGCATTATTTTC AGCTACTATGCCTAATATTATTCGTAGAATATCTAGAAGATTTATGAATACTCCAAAAGAAATAAAAATACAATCTACTG GTATTACTCGTCCCGACATTCAACAAAGTTATTGGATTGTAAGAGGAAGAAAAACTGATGCTTTAATTCGATTTTTAGAA GTAGAAGATTTTTCTGCTACTATAATTTTTGTTCGTACAAAAAATGCTACTTTAGAAGTATCAGAAGCATTAGAAAAAAA CGGATACAATAGTGCTGCTTTAAATGGTGATATGAATCAAGTATTACGAGAACAAACTTTAGAACGTTTAAAAAATGGTA AATTAGATATTTTAATAGCTACTGATGTTGCAGCTAGAGGTTTAGATGTTGATAGAATTAGTTTTGTTATTAATTATGAT ATTCCTACTGATGCAGAATCATATGTGCATAGAATCGGTAGAACTGGTAGAGCTGGTAGAACTGGTCGTGCATTGTTATT TGTTGAATATAGAGAATATAGATTATTAAAAAATATTGAAAGAATCATTAAACATCCTATTCATGAAATTCAATTACCTA AATCTGAAATTCTAATAGAAAAAAGATTACAAAATATTTCAAATAAAATTCAGGAACAATTAAATAATAAAAATTTAAAA TTATATAAATCATTATTATCAAAATTAAAATTAAAAGATGGTTGGAATTTTGAAAATTTATCTGCAGCATTATTAAAATT AGTTCAAAATGAAAGACCCCTTATTATTCCACCTGATAAAAAATCTTCTCCTCTTTCTTTTAAAAGAAATTCTTTTATTT CGTTTAATAATCAAAAAAAATATACAAATAATAGAAGATTTTTAAACAATAAATCTAATAAAAATTATAAAAAGATGGAA GATATGATTTTATATCGTATTGATATAGGTCGTAATGATAGAGTAGAAGTTCGTCATATTGTAGGAGCTATAGCAAATGA AGGTGATATTAGCAGTAGATTAATTGGAAATATTAGACTTTTTTCTAATTATTCCACTATTGAATTACCAAAAAGTTATT CAAAACATTTATTTACACGTTTATTACATACACGTATTTTAAATAAACCAATAAATATAAAATTAATGTCATCTGTTGTT CAAATAAAAGAAAATAAAAGAAGAAAATTTATAAAAAGTAAAAGAATATAA
Upstream 100 bases:
>100_bases TTAGCCGGTATACTTTTAAATAAAAAATATATTTTATATTTTATAAAAATATGAATTGTAGACTGGCCATTGTTGCAAAA ATAAGAGGCTTATACTCTGA
Downstream 100 bases:
>100_bases AATTAATTTGTTTTTTATTTTTTTTATAAAATTGAATTATATATTTTTATTTTTTAAAATATCAATTTTATGCCACTAAG TGGCATATTTATTTCATAAA
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]
Number of amino acids: Translated: 576; Mature: 575
Protein sequence:
>576_residues MTQIHLSFSVFGLNSFLLKSLKILGYEKPSPIQSACIPYLLSGKDVLGMAQTGSGKTAAFALPLLNNINISLKFPQILVL VPTRELAVQVAKSFSDFSKYLIGTQVLALYGGQRYEIQLHALRRGPQIIVGTPGRLLDHLKRGTLSLIHLSSLVLDEADE MLRMGFIEDVETIMSKIPRKHQTALFSATMPNIIRRISRRFMNTPKEIKIQSTGITRPDIQQSYWIVRGRKTDALIRFLE VEDFSATIIFVRTKNATLEVSEALEKNGYNSAALNGDMNQVLREQTLERLKNGKLDILIATDVAARGLDVDRISFVINYD IPTDAESYVHRIGRTGRAGRTGRALLFVEYREYRLLKNIERIIKHPIHEIQLPKSEILIEKRLQNISNKIQEQLNNKNLK LYKSLLSKLKLKDGWNFENLSAALLKLVQNERPLIIPPDKKSSPLSFKRNSFISFNNQKKYTNNRRFLNNKSNKNYKKME DMILYRIDIGRNDRVEVRHIVGAIANEGDISSRLIGNIRLFSNYSTIELPKSYSKHLFTRLLHTRILNKPINIKLMSSVV QIKENKRRKFIKSKRI
Sequences:
>Translated_576_residues MTQIHLSFSVFGLNSFLLKSLKILGYEKPSPIQSACIPYLLSGKDVLGMAQTGSGKTAAFALPLLNNINISLKFPQILVL VPTRELAVQVAKSFSDFSKYLIGTQVLALYGGQRYEIQLHALRRGPQIIVGTPGRLLDHLKRGTLSLIHLSSLVLDEADE MLRMGFIEDVETIMSKIPRKHQTALFSATMPNIIRRISRRFMNTPKEIKIQSTGITRPDIQQSYWIVRGRKTDALIRFLE VEDFSATIIFVRTKNATLEVSEALEKNGYNSAALNGDMNQVLREQTLERLKNGKLDILIATDVAARGLDVDRISFVINYD IPTDAESYVHRIGRTGRAGRTGRALLFVEYREYRLLKNIERIIKHPIHEIQLPKSEILIEKRLQNISNKIQEQLNNKNLK LYKSLLSKLKLKDGWNFENLSAALLKLVQNERPLIIPPDKKSSPLSFKRNSFISFNNQKKYTNNRRFLNNKSNKNYKKME DMILYRIDIGRNDRVEVRHIVGAIANEGDISSRLIGNIRLFSNYSTIELPKSYSKHLFTRLLHTRILNKPINIKLMSSVV QIKENKRRKFIKSKRI >Mature_575_residues TQIHLSFSVFGLNSFLLKSLKILGYEKPSPIQSACIPYLLSGKDVLGMAQTGSGKTAAFALPLLNNINISLKFPQILVLV PTRELAVQVAKSFSDFSKYLIGTQVLALYGGQRYEIQLHALRRGPQIIVGTPGRLLDHLKRGTLSLIHLSSLVLDEADEM LRMGFIEDVETIMSKIPRKHQTALFSATMPNIIRRISRRFMNTPKEIKIQSTGITRPDIQQSYWIVRGRKTDALIRFLEV EDFSATIIFVRTKNATLEVSEALEKNGYNSAALNGDMNQVLREQTLERLKNGKLDILIATDVAARGLDVDRISFVINYDI PTDAESYVHRIGRTGRAGRTGRALLFVEYREYRLLKNIERIIKHPIHEIQLPKSEILIEKRLQNISNKIQEQLNNKNLKL YKSLLSKLKLKDGWNFENLSAALLKLVQNERPLIIPPDKKSSPLSFKRNSFISFNNQKKYTNNRRFLNNKSNKNYKKMED MILYRIDIGRNDRVEVRHIVGAIANEGDISSRLIGNIRLFSNYSTIELPKSYSKHLFTRLLHTRILNKPINIKLMSSVVQ IKENKRRKFIKSKRI
Specific function: Has a helix-destabilizing activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI50659095, Length=399, Percent_Identity=38.8471177944862, Blast_Score=255, Evalue=9e-68, Organism=Homo sapiens, GI7661920, Length=374, Percent_Identity=35.8288770053476, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI20149629, Length=362, Percent_Identity=39.7790055248619, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI224593278, Length=421, Percent_Identity=37.0546318289786, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI31542656, Length=382, Percent_Identity=38.4816753926702, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI41327771, Length=378, Percent_Identity=38.3597883597884, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI41327773, Length=363, Percent_Identity=38.0165289256198, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI87196351, Length=388, Percent_Identity=36.340206185567, Blast_Score=232, Evalue=7e-61, Organism=Homo sapiens, GI301171467, Length=377, Percent_Identity=37.1352785145889, Blast_Score=232, Evalue=7e-61, Organism=Homo sapiens, GI301171475, Length=388, Percent_Identity=36.340206185567, Blast_Score=232, Evalue=7e-61, Organism=Homo sapiens, GI4503529, Length=375, Percent_Identity=38.1333333333333, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI13129006, Length=410, Percent_Identity=35.8536585365854, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI45446747, Length=379, Percent_Identity=35.8839050131926, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI45446743, Length=379, Percent_Identity=35.8839050131926, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI38201710, Length=426, Percent_Identity=34.2723004694836, Blast_Score=229, Evalue=8e-60, Organism=Homo sapiens, GI169881239, Length=377, Percent_Identity=37.1352785145889, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI13514809, Length=377, Percent_Identity=37.1352785145889, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI148613856, Length=428, Percent_Identity=34.1121495327103, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI83700235, Length=375, Percent_Identity=37.3333333333333, Blast_Score=226, Evalue=6e-59, Organism=Homo sapiens, GI4758138, Length=332, Percent_Identity=39.4578313253012, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI188035877, Length=363, Percent_Identity=34.9862258953168, Blast_Score=222, Evalue=7e-58, Organism=Homo sapiens, GI4758112, Length=350, Percent_Identity=35.4285714285714, Blast_Score=222, Evalue=8e-58, Organism=Homo sapiens, GI18375623, Length=350, Percent_Identity=35.4285714285714, Blast_Score=222, Evalue=8e-58, Organism=Homo sapiens, GI21040371, Length=350, Percent_Identity=35.7142857142857, Blast_Score=222, Evalue=9e-58, Organism=Homo sapiens, GI164664518, Length=354, Percent_Identity=33.6158192090396, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI41327776, Length=361, Percent_Identity=37.1191135734072, Blast_Score=220, Evalue=3e-57, Organism=Homo sapiens, GI262118318, Length=361, Percent_Identity=37.1191135734072, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI216548263, Length=361, Percent_Identity=37.1191135734072, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI262231852, Length=361, Percent_Identity=37.1191135734072, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI222352149, Length=357, Percent_Identity=36.1344537815126, Blast_Score=216, Evalue=6e-56, Organism=Homo sapiens, GI13518015, Length=361, Percent_Identity=37.1191135734072, Blast_Score=216, Evalue=7e-56, Organism=Homo sapiens, GI164419743, Length=347, Percent_Identity=36.3112391930836, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI51094101, Length=347, Percent_Identity=36.3112391930836, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=37.0786516853933, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI55749865, Length=356, Percent_Identity=33.1460674157303, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI164419732, Length=353, Percent_Identity=33.4277620396601, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI6005743, Length=392, Percent_Identity=32.3979591836735, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI8922886, Length=392, Percent_Identity=32.3979591836735, Blast_Score=193, Evalue=4e-49, Organism=Homo sapiens, GI62241022, Length=375, Percent_Identity=32.5333333333333, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI41327779, Length=512, Percent_Identity=29.4921875, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI9506931, Length=398, Percent_Identity=30.4020100502513, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI256223453, Length=356, Percent_Identity=30.0561797752809, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI62241024, Length=353, Percent_Identity=32.5779036827195, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI13514831, Length=398, Percent_Identity=33.1658291457286, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI38327634, Length=405, Percent_Identity=33.0864197530864, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI38569503, Length=382, Percent_Identity=30.3664921465969, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI38569505, Length=382, Percent_Identity=30.3664921465969, Blast_Score=160, Evalue=4e-39, Organism=Homo sapiens, GI17505907, Length=419, Percent_Identity=28.4009546539379, Blast_Score=153, Evalue=5e-37, Organism=Homo sapiens, GI256773275, Length=396, Percent_Identity=31.3131313131313, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI4826686, Length=345, Percent_Identity=28.9855072463768, Blast_Score=140, Evalue=4e-33, Organism=Homo sapiens, GI9966805, Length=332, Percent_Identity=29.5180722891566, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI154759257, Length=416, Percent_Identity=27.8846153846154, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI20336298, Length=221, Percent_Identity=34.3891402714932, Blast_Score=108, Evalue=2e-23, Organism=Escherichia coli, GI87082221, Length=563, Percent_Identity=64.1207815275311, Blast_Score=736, Evalue=0.0, Organism=Escherichia coli, GI1787605, Length=337, Percent_Identity=45.9940652818991, Blast_Score=288, Evalue=5e-79, Organism=Escherichia coli, GI1787016, Length=378, Percent_Identity=39.4179894179894, Blast_Score=286, Evalue=3e-78, Organism=Escherichia coli, GI1788930, Length=386, Percent_Identity=37.0466321243523, Blast_Score=230, Evalue=1e-61, Organism=Escherichia coli, GI1790214, Length=381, Percent_Identity=37.5328083989501, Blast_Score=229, Evalue=3e-61, Organism=Escherichia coli, GI48994977, Length=352, Percent_Identity=25, Blast_Score=85, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17555296, Length=400, Percent_Identity=36.75, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI71987143, Length=375, Percent_Identity=37.6, Blast_Score=252, Evalue=4e-67, Organism=Caenorhabditis elegans, GI71995724, Length=374, Percent_Identity=36.096256684492, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17507121, Length=374, Percent_Identity=35.8288770053476, Blast_Score=248, Evalue=5e-66, Organism=Caenorhabditis elegans, GI32565321, Length=372, Percent_Identity=38.1720430107527, Blast_Score=244, Evalue=1e-64, Organism=Caenorhabditis elegans, GI115533224, Length=348, Percent_Identity=40.8045977011494, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=38.4823848238482, Blast_Score=241, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17510559, Length=390, Percent_Identity=36.4102564102564, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI86570094, Length=358, Percent_Identity=38.268156424581, Blast_Score=237, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17537549, Length=384, Percent_Identity=37.5, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17510309, Length=385, Percent_Identity=37.1428571428571, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17510307, Length=385, Percent_Identity=37.1428571428571, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71995514, Length=385, Percent_Identity=37.1428571428571, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17552642, Length=385, Percent_Identity=36.1038961038961, Blast_Score=231, Evalue=7e-61, Organism=Caenorhabditis elegans, GI71982858, Length=350, Percent_Identity=34.8571428571429, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17552114, Length=374, Percent_Identity=32.620320855615, Blast_Score=215, Evalue=5e-56, Organism=Caenorhabditis elegans, GI115532548, Length=393, Percent_Identity=32.3155216284987, Blast_Score=211, Evalue=9e-55, Organism=Caenorhabditis elegans, GI115532546, Length=376, Percent_Identity=32.7127659574468, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17509811, Length=439, Percent_Identity=33.4851936218679, Blast_Score=206, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=34.5844504021448, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI71999646, Length=361, Percent_Identity=31.0249307479224, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71999644, Length=365, Percent_Identity=30.6849315068493, Blast_Score=194, Evalue=7e-50, Organism=Caenorhabditis elegans, GI17507945, Length=362, Percent_Identity=35.6353591160221, Blast_Score=194, Evalue=8e-50, Organism=Caenorhabditis elegans, GI17507879, Length=388, Percent_Identity=33.2474226804124, Blast_Score=192, Evalue=5e-49, Organism=Caenorhabditis elegans, GI17507881, Length=399, Percent_Identity=31.5789473684211, Blast_Score=189, Evalue=4e-48, Organism=Caenorhabditis elegans, GI17536099, Length=380, Percent_Identity=31.3157894736842, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17536101, Length=380, Percent_Identity=31.3157894736842, Blast_Score=175, Evalue=6e-44, Organism=Caenorhabditis elegans, GI193206561, Length=379, Percent_Identity=27.1767810026385, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17536103, Length=380, Percent_Identity=31.3157894736842, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17505370, Length=443, Percent_Identity=29.5711060948081, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI193208216, Length=415, Percent_Identity=31.3253012048193, Blast_Score=168, Evalue=6e-42, Organism=Caenorhabditis elegans, GI17508543, Length=387, Percent_Identity=29.9741602067183, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI25148203, Length=458, Percent_Identity=27.9475982532751, Blast_Score=154, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17553716, Length=362, Percent_Identity=28.7292817679558, Blast_Score=149, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17507641, Length=415, Percent_Identity=29.1566265060241, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI71990816, Length=369, Percent_Identity=31.1653116531165, Blast_Score=143, Evalue=3e-34, Organism=Caenorhabditis elegans, GI32564046, Length=391, Percent_Identity=29.6675191815857, Blast_Score=141, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17556951, Length=377, Percent_Identity=29.4429708222812, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71982862, Length=203, Percent_Identity=36.9458128078818, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI25148291, Length=365, Percent_Identity=27.3972602739726, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI71997889, Length=412, Percent_Identity=26.6990291262136, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI25148205, Length=382, Percent_Identity=25.9162303664921, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71987152, Length=112, Percent_Identity=42.8571428571429, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17557982, Length=432, Percent_Identity=22.9166666666667, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17565430, Length=356, Percent_Identity=25.8426966292135, Blast_Score=83, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6321856, Length=374, Percent_Identity=40.1069518716578, Blast_Score=255, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6324217, Length=351, Percent_Identity=39.3162393162393, Blast_Score=250, Evalue=5e-67, Organism=Saccharomyces cerevisiae, GI6321360, Length=360, Percent_Identity=41.3888888888889, Blast_Score=246, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6325138, Length=385, Percent_Identity=37.1428571428571, Blast_Score=241, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6320224, Length=364, Percent_Identity=36.8131868131868, Blast_Score=239, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6324778, Length=389, Percent_Identity=35.73264781491, Blast_Score=236, Evalue=6e-63, Organism=Saccharomyces cerevisiae, GI6323021, Length=441, Percent_Identity=33.3333333333333, Blast_Score=223, Evalue=9e-59, Organism=Saccharomyces cerevisiae, GI6320041, Length=356, Percent_Identity=34.5505617977528, Blast_Score=211, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6322912, Length=365, Percent_Identity=35.8904109589041, Blast_Score=210, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6322323, Length=365, Percent_Identity=35.8904109589041, Blast_Score=210, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6321963, Length=403, Percent_Identity=34.7394540942928, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6320119, Length=352, Percent_Identity=34.0909090909091, Blast_Score=200, Evalue=6e-52, Organism=Saccharomyces cerevisiae, GI6324620, Length=367, Percent_Identity=32.9700272479564, Blast_Score=199, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6319714, Length=410, Percent_Identity=30.9756097560976, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6320449, Length=358, Percent_Identity=35.4748603351955, Blast_Score=190, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6323947, Length=427, Percent_Identity=32.5526932084309, Blast_Score=186, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6321111, Length=382, Percent_Identity=32.1989528795811, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6322427, Length=352, Percent_Identity=31.8181818181818, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=29.0556900726392, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6321267, Length=376, Percent_Identity=32.1808510638298, Blast_Score=150, Evalue=8e-37, Organism=Saccharomyces cerevisiae, GI6320400, Length=382, Percent_Identity=28.5340314136126, Blast_Score=147, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6320173, Length=191, Percent_Identity=41.8848167539267, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6319618, Length=410, Percent_Identity=30, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6322876, Length=485, Percent_Identity=27.8350515463918, Blast_Score=139, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6321374, Length=424, Percent_Identity=25, Blast_Score=107, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6324366, Length=343, Percent_Identity=26.530612244898, Blast_Score=103, Evalue=5e-23, Organism=Drosophila melanogaster, GI24584399, Length=360, Percent_Identity=39.4444444444444, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI28574962, Length=351, Percent_Identity=40.4558404558405, Blast_Score=245, Evalue=5e-65, Organism=Drosophila melanogaster, GI24645031, Length=374, Percent_Identity=35.5614973262032, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI24585582, Length=378, Percent_Identity=37.037037037037, Blast_Score=244, Evalue=2e-64, Organism=Drosophila melanogaster, GI24584994, Length=392, Percent_Identity=36.4795918367347, Blast_Score=240, Evalue=3e-63, Organism=Drosophila melanogaster, GI24642151, Length=374, Percent_Identity=37.1657754010695, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI21355075, Length=369, Percent_Identity=36.5853658536585, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24662330, Length=369, Percent_Identity=38.2113821138211, Blast_Score=232, Evalue=6e-61, Organism=Drosophila melanogaster, GI17985987, Length=391, Percent_Identity=35.5498721227622, Blast_Score=226, Evalue=5e-59, Organism=Drosophila melanogaster, GI24644483, Length=377, Percent_Identity=35.8090185676393, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI24644487, Length=377, Percent_Identity=35.8090185676393, Blast_Score=222, Evalue=6e-58, Organism=Drosophila melanogaster, GI45551833, Length=377, Percent_Identity=35.8090185676393, Blast_Score=222, Evalue=6e-58, Organism=Drosophila melanogaster, GI24644485, Length=377, Percent_Identity=35.8090185676393, Blast_Score=222, Evalue=6e-58, Organism=Drosophila melanogaster, GI281361218, Length=377, Percent_Identity=35.8090185676393, Blast_Score=221, Evalue=8e-58, Organism=Drosophila melanogaster, GI24644481, Length=377, Percent_Identity=35.8090185676393, Blast_Score=221, Evalue=8e-58, Organism=Drosophila melanogaster, GI24644479, Length=377, Percent_Identity=35.8090185676393, Blast_Score=221, Evalue=8e-58, Organism=Drosophila melanogaster, GI18857967, Length=359, Percent_Identity=38.1615598885794, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24582080, Length=370, Percent_Identity=35.4054054054054, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24582078, Length=370, Percent_Identity=35.4054054054054, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI17136248, Length=370, Percent_Identity=35.4054054054054, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24582075, Length=370, Percent_Identity=35.4054054054054, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI21356161, Length=438, Percent_Identity=33.5616438356164, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI17136814, Length=375, Percent_Identity=36.2666666666667, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI24581954, Length=351, Percent_Identity=35.042735042735, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24581952, Length=351, Percent_Identity=35.042735042735, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24581956, Length=351, Percent_Identity=35.042735042735, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24583281, Length=396, Percent_Identity=33.0808080808081, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI24583279, Length=395, Percent_Identity=33.1645569620253, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI17977678, Length=357, Percent_Identity=36.9747899159664, Blast_Score=211, Evalue=2e-54, Organism=Drosophila melanogaster, GI28575014, Length=377, Percent_Identity=33.1564986737401, Blast_Score=208, Evalue=1e-53, Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=37.4603174603175, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI24643725, Length=400, Percent_Identity=31.25, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI28571808, Length=436, Percent_Identity=30.9633027522936, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI28571809, Length=436, Percent_Identity=30.9633027522936, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI21355559, Length=359, Percent_Identity=34.8189415041783, Blast_Score=169, Evalue=6e-42, Organism=Drosophila melanogaster, GI24666101, Length=361, Percent_Identity=31.3019390581717, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24668515, Length=349, Percent_Identity=30.0859598853868, Blast_Score=147, Evalue=3e-35, Organism=Drosophila melanogaster, GI17647335, Length=380, Percent_Identity=28.1578947368421, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=31.7460317460317, Blast_Score=142, Evalue=6e-34, Organism=Drosophila melanogaster, GI20130173, Length=406, Percent_Identity=30.5418719211823, Blast_Score=142, Evalue=6e-34, Organism=Drosophila melanogaster, GI19920478, Length=370, Percent_Identity=30.2702702702703, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI24640164, Length=396, Percent_Identity=25, Blast_Score=119, Evalue=8e-27, Organism=Drosophila melanogaster, GI17136666, Length=492, Percent_Identity=24.7967479674797, Blast_Score=113, Evalue=4e-25, Organism=Drosophila melanogaster, GI28571338, Length=218, Percent_Identity=33.9449541284404, Blast_Score=106, Evalue=5e-23, Organism=Drosophila melanogaster, GI18859659, Length=218, Percent_Identity=33.9449541284404, Blast_Score=106, Evalue=5e-23, Organism=Drosophila melanogaster, GI24646066, Length=363, Percent_Identity=24.2424242424242, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 65979; Mature: 65848
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQIHLSFSVFGLNSFLLKSLKILGYEKPSPIQSACIPYLLSGKDVLGMAQTGSGKTAAF CCEEEEEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEE ALPLLNNINISLKFPQILVLVPTRELAVQVAKSFSDFSKYLIGTQVLALYGGQRYEIQLH EEEHHCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE ALRRGPQIIVGTPGRLLDHLKRGTLSLIHLSSLVLDEADEMLRMGFIEDVETIMSKIPRK EECCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH HQTALFSATMPNIIRRISRRFMNTPKEIKIQSTGITRPDIQQSYWIVRGRKTDALIRFLE HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHEEEEE VEDFSATIIFVRTKNATLEVSEALEKNGYNSAALNGDMNQVLREQTLERLKNGKLDILIA ECCCCEEEEEEEECCCCCHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCEEEEEE TDVAARGLDVDRISFVINYDIPTDAESYVHRIGRTGRAGRTGRALLFVEYREYRLLKNIE ECHHHCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHH RIIKHPIHEIQLPKSEILIEKRLQNISNKIQEQLNNKNLKLYKSLLSKLKLKDGWNFENL HHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHH SAALLKLVQNERPLIIPPDKKSSPLSFKRNSFISFNNQKKYTNNRRFLNNKSNKNYKKME HHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHH DMILYRIDIGRNDRVEVRHIVGAIANEGDISSRLIGNIRLFSNYSTIELPKSYSKHLFTR HEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHEEEEEEECCCEEECCHHHHHHHHHH LLHTRILNKPINIKLMSSVVQIKENKRRKFIKSKRI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQIHLSFSVFGLNSFLLKSLKILGYEKPSPIQSACIPYLLSGKDVLGMAQTGSGKTAAF CEEEEEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEE ALPLLNNINISLKFPQILVLVPTRELAVQVAKSFSDFSKYLIGTQVLALYGGQRYEIQLH EEEHHCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE ALRRGPQIIVGTPGRLLDHLKRGTLSLIHLSSLVLDEADEMLRMGFIEDVETIMSKIPRK EECCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH HQTALFSATMPNIIRRISRRFMNTPKEIKIQSTGITRPDIQQSYWIVRGRKTDALIRFLE HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHEEEEE VEDFSATIIFVRTKNATLEVSEALEKNGYNSAALNGDMNQVLREQTLERLKNGKLDILIA ECCCCEEEEEEEECCCCCHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCEEEEEE TDVAARGLDVDRISFVINYDIPTDAESYVHRIGRTGRAGRTGRALLFVEYREYRLLKNIE ECHHHCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHH RIIKHPIHEIQLPKSEILIEKRLQNISNKIQEQLNNKNLKLYKSLLSKLKLKDGWNFENL HHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHH SAALLKLVQNERPLIIPPDKKSSPLSFKRNSFISFNNQKKYTNNRRFLNNKSNKNYKKME HHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHH DMILYRIDIGRNDRVEVRHIVGAIANEGDISSRLIGNIRLFSNYSTIELPKSYSKHLFTR HEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHEEEEEEECCCEEECCHHHHHHHHHH LLHTRILNKPINIKLMSSVVQIKENKRRKFIKSKRI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]