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The map label for this gene is infA

Identifier: 116515131

GI number: 116515131

Start: 229401

End: 229616

Strand: Direct

Name: infA

Synonym: BCc_195

Alternate gene names: 116515131

Gene position: 229401-229616 (Clockwise)

Preceding gene: 116515130

Following gene: 116515132

Centisome position: 55.09

GC content: 25.46

Gene sequence:

>216_bases
ATGAAAGAAAAAAATATAGAAATGCAAGGAACAGTAATCGATACTCTTCCTAATACAACATTTAAAGTAGAATTAGAAAA
TAAACATATTGTTATAGCGCATATATCAGGAAAAATGAGAAAAAATTATATACGAATTTTAACAGGTGATAAAGTTACTT
TAGAATTAACACCTTATGATTTGAGTAAAGGTCGAATAATTTTTCGTAGTAGATAG

Upstream 100 bases:

>100_bases
CTGCTAGTGGATGTATGGCAGCAATAGATGCTGAAAAATATTTAAATAATATTTCAAAAAAAAAAACGCTCTTTAATATT
AATTAAAGGAAAGTATTTAT

Downstream 100 bases:

>100_bases
TATTTAAAATATTTTTAATATTAAATTAATAAATTTAAAATTAATTGAAATTAGGATTTTTATGCGAACTAAATATTGTG
GAGAAATAAAAAAAAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MKEKNIEMQGTVIDTLPNTTFKVELENKHIVIAHISGKMRKNYIRILTGDKVTLELTPYDLSKGRIIFRSR

Sequences:

>Translated_71_residues
MKEKNIEMQGTVIDTLPNTTFKVELENKHIVIAHISGKMRKNYIRILTGDKVTLELTPYDLSKGRIIFRSR
>Mature_71_residues
MKEKNIEMQGTVIDTLPNTTFKVELENKHIVIAHISGKMRKNYIRILTGDKVTLELTPYDLSKGRIIFRSR

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain

Homologues:

Organism=Escherichia coli, GI1787110, Length=70, Percent_Identity=85.7142857142857, Blast_Score=129, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IF1_BUCCC (Q057N2)

Other databases:

- EMBL:   CP000263
- RefSeq:   YP_802760.1
- ProteinModelPortal:   Q057N2
- SMR:   Q057N2
- STRING:   Q057N2
- EnsemblBacteria:   EBBUCT00000001260
- GeneID:   4440689
- GenomeReviews:   CP000263_GR
- KEGG:   bcc:BCc_195
- eggNOG:   COG0361
- GeneTree:   EBGT00050000007920
- HOGENOM:   HBG286099
- OMA:   KMRMHFI
- BioCyc:   BAPH372461:BCC_195-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00075
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00316
- TIGRFAMs:   TIGR00008

Pfam domain/function: PF01176 eIF-1a; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 8245; Mature: 8245

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKNIEMQGTVIDTLPNTTFKVELENKHIVIAHISGKMRKNYIRILTGDKVTLELTPYD
CCCCCEEEECEEEECCCCCEEEEEECCCEEEEEECCCCCCCCEEEEEECCEEEEEECCCC
LSKGRIIFRSR
CCCCEEEEEEC
>Mature Secondary Structure
MKEKNIEMQGTVIDTLPNTTFKVELENKHIVIAHISGKMRKNYIRILTGDKVTLELTPYD
CCCCCEEEECEEEECCCCCEEEEEECCCEEEEEECCCCCCCCEEEEEECCEEEEEECCCC
LSKGRIIFRSR
CCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA