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The map label for this gene is nusG [H]

Identifier: 116514973

GI number: 116514973

Start: 30641

End: 31183

Strand: Reverse

Name: nusG [H]

Synonym: BCc_024

Alternate gene names: 116514973

Gene position: 31183-30641 (Counterclockwise)

Preceding gene: 116514974

Following gene: 116514972

Centisome position: 7.49

GC content: 23.94

Gene sequence:

>543_bases
TTGTGTATAAATAAAAAAAAATGGTATGTACTTCAAACATTTTCAGGATTTGAAAATCAAGTATTACAATCAATTATAAA
TAATGAAAAAATAAAAAAAATGAAAGAAATTTTCGGAAAAGTTATTATACCTTCTGAAGAAGTAATAGAAATAAAAAAGG
GAAAAAGAAAAAAAAGTGATTATAAATTTTTTCCAGGATATATTTTAATTCATATGATAATGAACAATTATAGTTGGCAT
ATAATTAAAAATTTACCAAAAGTATTAGGTTTTATAGGTAGTTCTTCTGAACAACCAACTCCAGTTAACAACCATGAAAT
TAATTTAATTTTAGATAAACTTAAAAAAATTGGTGATAAACCTAGACCAAAAAAAATATTTGAACCAGGAGAAAATGTTC
GAGTAAATGATGGTCCATTTTCAGATTTTAACGGAATTGTTGAAACTATCGATTATGAAAAAAACAGACTCAAAGTCTCT
GTATCAATATTTGGACGTTCAACACCTGTTGAATTAGATTTTAGACAAGTTGAAAAATATTAA

Upstream 100 bases:

>100_bases
TAATTTTATTACTAACTATTTTAACATCTATATTTTTATGGCTATTAGATGGAATTATACTTAGAATAATATCTTGGGTA
CTTACTCCGAGGTTATAAAA

Downstream 100 bases:

>100_bases
ATTCTATCTAATAAAAAATATTTCTATAATCACATAAAATAAGGAATTATATGATTAATAAAAAAATTACATCATATATA
AAATTACAAATACCATGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MCINKKKWYVLQTFSGFENQVLQSIINNEKIKKMKEIFGKVIIPSEEVIEIKKGKRKKSDYKFFPGYILIHMIMNNYSWH
IIKNLPKVLGFIGSSSEQPTPVNNHEINLILDKLKKIGDKPRPKKIFEPGENVRVNDGPFSDFNGIVETIDYEKNRLKVS
VSIFGRSTPVELDFRQVEKY

Sequences:

>Translated_180_residues
MCINKKKWYVLQTFSGFENQVLQSIINNEKIKKMKEIFGKVIIPSEEVIEIKKGKRKKSDYKFFPGYILIHMIMNNYSWH
IIKNLPKVLGFIGSSSEQPTPVNNHEINLILDKLKKIGDKPRPKKIFEPGENVRVNDGPFSDFNGIVETIDYEKNRLKVS
VSIFGRSTPVELDFRQVEKY
>Mature_180_residues
MCINKKKWYVLQTFSGFENQVLQSIINNEKIKKMKEIFGKVIIPSEEVIEIKKGKRKKSDYKFFPGYILIHMIMNNYSWH
IIKNLPKVLGFIGSSSEQPTPVNNHEINLILDKLKKIGDKPRPKKIFEPGENVRVNDGPFSDFNGIVETIDYEKNRLKVS
VSIFGRSTPVELDFRQVEKY

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=175, Percent_Identity=60, Blast_Score=254, Evalue=2e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20979; Mature: 20979

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCINKKKWYVLQTFSGFENQVLQSIINNEKIKKMKEIFGKVIIPSEEVIEIKKGKRKKSD
CCCCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCEECCCCHHHHHHHCCCCCCCC
YKFFPGYILIHMIMNNYSWHIIKNLPKVLGFIGSSSEQPTPVNNHEINLILDKLKKIGDK
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PRPKKIFEPGENVRVNDGPFSDFNGIVETIDYEKNRLKVSVSIFGRSTPVELDFRQVEKY
CCCCHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEECHHHHCCC
>Mature Secondary Structure
MCINKKKWYVLQTFSGFENQVLQSIINNEKIKKMKEIFGKVIIPSEEVIEIKKGKRKKSD
CCCCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCEECCCCHHHHHHHCCCCCCCC
YKFFPGYILIHMIMNNYSWHIIKNLPKVLGFIGSSSEQPTPVNNHEINLILDKLKKIGDK
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PRPKKIFEPGENVRVNDGPFSDFNGIVETIDYEKNRLKVSVSIFGRSTPVELDFRQVEKY
CCCCHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]