Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
---|---|
Accession | NC_008508 |
Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is 116328452
Identifier: 116328452
GI number: 116328452
Start: 2088816
End: 2090570
Strand: Direct
Name: 116328452
Synonym: LBL_1795
Alternate gene names: NA
Gene position: 2088816-2090570 (Clockwise)
Preceding gene: 116328449
Following gene: 116328453
Centisome position: 57.79
GC content: 41.37
Gene sequence:
>1755_bases TTGGAAAAAGTTTGGTCTTCTTTCGTAAATAAAATCGTGGCCTTAACGTTTACGAACAATCAACCTATGTTCAACTATGC GGTCTTTGAAGCGATTCAAGACAAGAATTTAAAAATCGTGGCCTCCTCCACACATTTTAAAATGAAAGAAGTCGCGACTC GAATCGGACTCAAAGATATTCAAGAATTTATAAACCGAACTCTTCCCGTATCGATCCAGGACCAGGATAATCTTTCCGCG AATTTTATCCGAGAAGCGATCATATCAGTCGAAACCAAAAAACGTCCCGAAGTCGTTTTCAGTAGTCTCAAAGACGAAAA AATTCACCCGAATTTAAGACATCTTCTTTCGGGGACCATGAACTACGCAGCCGGAATTCCACTTTTCGTAAAAGGAAATC CGATCGGTATGATCTGGGGAATTCGAAGAGATAGGATGAGCGACGAACAAAGAGAAGAAGTTCGAGAACAATTGAGTTCC TTTTACGACGTGGTGGATTTTGTAGTCGCCCGTGAAATGGACAACAAAGCGGATCCTTATATCGCAAAAAAGAATATAGA AAAAGCGGATCTTCATTCCTACGCGAAACACCTTTATTACACGAGAACCGGAGGACAACAACATCCGATCACTTCGATCA TCTTCGATTGTCATACTTACAATTGTTCCTATCGTTTGGACGCGAGTTATATTATTCCGTCTAACAACGGTTTTTCGGTT AGTCTAAAACGATTCGAACCGGAAAAAACGAACGAAACCGGAAAAATCCTTCTTTTGATCCCCGGCTTTTTCTGTAGAAG ATCGGTGATGGACAAGGTTGCACGAGAAATGGCTCTTAAATACGGTTACCGAGTCTTTTCCATGGATATGCGCGGTCGCT CCAGACAAACTCTTCCCTACAACGGAATTAAAGAAGGATGGACGATCGACGATTTCATTCAGGAAGATTTTCCCGCGGTT CTCAATTGGATACGAGAAAGTTTTCCAAAAGAAAAAATCGTAGTGATGGGGCACAGTATGGTGGGAATGATTCCTAGATA CTATGTATCCGCCTACGAAACCTTCATCTCCAAATATCCTCAAAACAAGGTCCCACTTCCCGATCCCCAAGAGGCGATTT CCGGAATTATTTCCGTGACTTCCCCAAACTTCGTCTCCGTAGGAACCAATATTCCCGGAATGAATGCGCTCAAAACGGGA CTCAGTCTATTGCCCGCAAAATCGATTTCTGATTTTCTTTTCGATCTGACTACGTTCTCTCTTCAATCCGCTCTTCCGAC AGTGGATCTCAATAAATTCTTTAAGTTCTTATTGGGGCTTCATTCTTCCTTGAGAACGGTTTCTTTTGAACTCAGTACGA AAGTCGTAAACCTAAGAGATTTTGTAGGCTACAGACAAATTTCTCCTCCGGAATGGTATTTTCTGATCGAAGATATTTTC TGCGAGGAATCCACAAAAGTAATTCTACAGTTCATCCGTTCTCAGTTAAGCAAGGATCACGCATTTTTTTCTTTCGACGG TTCGATCAATTATACGGAATTACAAAGAAATTTCCAACTTCCGATTTACTCCGTTTTAAGCACTTTGGATAAAATCGTTC CTGTAGATTCGGTGGAAGAAGAATTGAAATCTCTCCCTTCTCCCAACAATCAAATCGTAAAATTCGATCAGGGACATTTA GGAATTCTCTTCCATATGCCTACGGTTCGGGAAATGTGTTCCGGCTTTCACGATTGGATTCAGAAACTCGATTGA
Upstream 100 bases:
>100_bases AAAAAAAACTGGGACTCGTAAAAAAAGAGGAAAGAGCGGACTTAACGTAGCGGCCGACGACATTTTCCTATTTCCAATCC CGGATCCTACCTATAAGTTT
Downstream 100 bases:
>100_bases TTTCCTCGGGAAAGCATTTGACACCAAAGGTTTACAAGGATAGCCTCCAAAGGGAATGGATCTTGTAGAAGCAAAAATTT CAGACATTTCTCTGACAAAC
Product: hydrolase or acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MEKVWSSFVNKIVALTFTNNQPMFNYAVFEAIQDKNLKIVASSTHFKMKEVATRIGLKDIQEFINRTLPVSIQDQDNLSA NFIREAIISVETKKRPEVVFSSLKDEKIHPNLRHLLSGTMNYAAGIPLFVKGNPIGMIWGIRRDRMSDEQREEVREQLSS FYDVVDFVVAREMDNKADPYIAKKNIEKADLHSYAKHLYYTRTGGQQHPITSIIFDCHTYNCSYRLDASYIIPSNNGFSV SLKRFEPEKTNETGKILLLIPGFFCRRSVMDKVAREMALKYGYRVFSMDMRGRSRQTLPYNGIKEGWTIDDFIQEDFPAV LNWIRESFPKEKIVVMGHSMVGMIPRYYVSAYETFISKYPQNKVPLPDPQEAISGIISVTSPNFVSVGTNIPGMNALKTG LSLLPAKSISDFLFDLTTFSLQSALPTVDLNKFFKFLLGLHSSLRTVSFELSTKVVNLRDFVGYRQISPPEWYFLIEDIF CEESTKVILQFIRSQLSKDHAFFSFDGSINYTELQRNFQLPIYSVLSTLDKIVPVDSVEEELKSLPSPNNQIVKFDQGHL GILFHMPTVREMCSGFHDWIQKLD
Sequences:
>Translated_584_residues MEKVWSSFVNKIVALTFTNNQPMFNYAVFEAIQDKNLKIVASSTHFKMKEVATRIGLKDIQEFINRTLPVSIQDQDNLSA NFIREAIISVETKKRPEVVFSSLKDEKIHPNLRHLLSGTMNYAAGIPLFVKGNPIGMIWGIRRDRMSDEQREEVREQLSS FYDVVDFVVAREMDNKADPYIAKKNIEKADLHSYAKHLYYTRTGGQQHPITSIIFDCHTYNCSYRLDASYIIPSNNGFSV SLKRFEPEKTNETGKILLLIPGFFCRRSVMDKVAREMALKYGYRVFSMDMRGRSRQTLPYNGIKEGWTIDDFIQEDFPAV LNWIRESFPKEKIVVMGHSMVGMIPRYYVSAYETFISKYPQNKVPLPDPQEAISGIISVTSPNFVSVGTNIPGMNALKTG LSLLPAKSISDFLFDLTTFSLQSALPTVDLNKFFKFLLGLHSSLRTVSFELSTKVVNLRDFVGYRQISPPEWYFLIEDIF CEESTKVILQFIRSQLSKDHAFFSFDGSINYTELQRNFQLPIYSVLSTLDKIVPVDSVEEELKSLPSPNNQIVKFDQGHL GILFHMPTVREMCSGFHDWIQKLD >Mature_584_residues MEKVWSSFVNKIVALTFTNNQPMFNYAVFEAIQDKNLKIVASSTHFKMKEVATRIGLKDIQEFINRTLPVSIQDQDNLSA NFIREAIISVETKKRPEVVFSSLKDEKIHPNLRHLLSGTMNYAAGIPLFVKGNPIGMIWGIRRDRMSDEQREEVREQLSS FYDVVDFVVAREMDNKADPYIAKKNIEKADLHSYAKHLYYTRTGGQQHPITSIIFDCHTYNCSYRLDASYIIPSNNGFSV SLKRFEPEKTNETGKILLLIPGFFCRRSVMDKVAREMALKYGYRVFSMDMRGRSRQTLPYNGIKEGWTIDDFIQEDFPAV LNWIRESFPKEKIVVMGHSMVGMIPRYYVSAYETFISKYPQNKVPLPDPQEAISGIISVTSPNFVSVGTNIPGMNALKTG LSLLPAKSISDFLFDLTTFSLQSALPTVDLNKFFKFLLGLHSSLRTVSFELSTKVVNLRDFVGYRQISPPEWYFLIEDIF CEESTKVILQFIRSQLSKDHAFFSFDGSINYTELQRNFQLPIYSVLSTLDKIVPVDSVEEELKSLPSPNNQIVKFDQGHL GILFHMPTVREMCSGFHDWIQKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67026; Mature: 67026
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKVWSSFVNKIVALTFTNNQPMFNYAVFEAIQDKNLKIVASSTHFKMKEVATRIGLKDI CCHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHH QEFINRTLPVSIQDQDNLSANFIREAIISVETKKRPEVVFSSLKDEKIHPNLRHLLSGTM HHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHH NYAAGIPLFVKGNPIGMIWGIRRDRMSDEQREEVREQLSSFYDVVDFVVAREMDNKADPY HHHCCCEEEECCCCEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IAKKNIEKADLHSYAKHLYYTRTGGQQHPITSIIFDCHTYNCSYRLDASYIIPSNNGFSV HHHCCCCHHHHHHHHHHHEEECCCCCCCCCHHEEEEEEECCCEEEECCEEEEECCCCCEE SLKRFEPEKTNETGKILLLIPGFFCRRSVMDKVAREMALKYGYRVFSMDMRGRSRQTLPY EEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC NGIKEGWTIDDFIQEDFPAVLNWIRESFPKEKIVVMGHSMVGMIPRYYVSAYETFISKYP CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCC QNKVPLPDPQEAISGIISVTSPNFVSVGTNIPGMNALKTGLSLLPAKSISDFLFDLTTFS CCCCCCCCHHHHHHHEEEECCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH LQSALPTVDLNKFFKFLLGLHSSLRTVSFELSTKVVNLRDFVGYRQISPPEWYFLIEDIF HHHCCCCCCHHHHHHHHHHHHHHHHEEEEEHHHHEEHHHHHHCCCCCCCCCCEEEHHHHH CEESTKVILQFIRSQLSKDHAFFSFDGSINYTELQRNFQLPIYSVLSTLDKIVPVDSVEE HCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH ELKSLPSPNNQIVKFDQGHLGILFHMPTVREMCSGFHDWIQKLD HHHHCCCCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKVWSSFVNKIVALTFTNNQPMFNYAVFEAIQDKNLKIVASSTHFKMKEVATRIGLKDI CCHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHH QEFINRTLPVSIQDQDNLSANFIREAIISVETKKRPEVVFSSLKDEKIHPNLRHLLSGTM HHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHH NYAAGIPLFVKGNPIGMIWGIRRDRMSDEQREEVREQLSSFYDVVDFVVAREMDNKADPY HHHCCCEEEECCCCEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IAKKNIEKADLHSYAKHLYYTRTGGQQHPITSIIFDCHTYNCSYRLDASYIIPSNNGFSV HHHCCCCHHHHHHHHHHHEEECCCCCCCCCHHEEEEEEECCCEEEECCEEEEECCCCCEE SLKRFEPEKTNETGKILLLIPGFFCRRSVMDKVAREMALKYGYRVFSMDMRGRSRQTLPY EEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC NGIKEGWTIDDFIQEDFPAVLNWIRESFPKEKIVVMGHSMVGMIPRYYVSAYETFISKYP CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCC QNKVPLPDPQEAISGIISVTSPNFVSVGTNIPGMNALKTGLSLLPAKSISDFLFDLTTFS CCCCCCCCHHHHHHHEEEECCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH LQSALPTVDLNKFFKFLLGLHSSLRTVSFELSTKVVNLRDFVGYRQISPPEWYFLIEDIF HHHCCCCCCHHHHHHHHHHHHHHHHEEEEEHHHHEEHHHHHHCCCCCCCCCCEEEHHHHH CEESTKVILQFIRSQLSKDHAFFSFDGSINYTELQRNFQLPIYSVLSTLDKIVPVDSVEE HCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH ELKSLPSPNNQIVKFDQGHLGILFHMPTVREMCSGFHDWIQKLD HHHHCCCCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA