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The map label for this gene is rfbF [H]

Identifier: 116327951

GI number: 116327951

Start: 1458522

End: 1459433

Strand: Direct

Name: rfbF [H]

Synonym: LBL_1240

Alternate gene names: 116327951

Gene position: 1458522-1459433 (Clockwise)

Preceding gene: 116327950

Following gene: 116327952

Centisome position: 40.35

GC content: 33.0

Gene sequence:

>912_bases
ATGCCAGAAAAATTTTCTCCGTTAGCTGTTATTGTTACTTTTAATCCTGATATAACTTTAACTTACAAAAACGTTCAAAA
TCTGAATTCAAATTCAATTCCAGTCTTGATCGTAGATAACCGATCTAAAAACGTATCTTTAATCCGTTCCAAGATTGGAA
AACAGAACTTTCTTGTGGAAAGCGAATCTAATCTAGGTTTGGGGTTTGCTTTAAATCGAGGAATCGAATACGCACAAACG
AATCGATATACACATGTTTGGTTATTTGATCAAGATAGTTTTTTGGAAACGTCGGCGATCCGAATTTTTCTGCAAAAAGT
CAGAGAGTACGGAACACAAAAGTTCCGGAACGAGAAAGTCGCGTCTTTCGGCCCTAATATTTTTGATACAATCAAAAATC
GTAATATTTATGGAATTCCTAAAAACCAAACTGGAATTTTAACTGCAAAGTTTCTAATAACTTCTGGAAGTTTTTATTCA
TTGGAAGTTTTAAAAGAGGTAGGTTTGTTATATCAGGATTTCTTTATAGATTATTTGGATTACGAGTGGTGTTTTCGGGC
CAATAATAAAGGTTACGTTCATAAAATTGTTTCCGATGTGAAAATGAAACATTCTATAGGAACCGATTCCAGGAGTATAT
TCGGAATTTTTAAAGTTGCAATTCATTCTCCCTTTAGGTGGTATTTCCTTTTTAGGAATGGAGTGTATATTTGTAAAATG
TCACATATTCCGTTTTGCTTTAAACTGGAAGTTGTTCTGAAAACATTCTTTCGATTTTTGATCTTGCCTATTTTTTCTGA
TTCTAAATATCAAACGTATCTTCATATTCTTTGCGGGATTCGTGATGGAATTACCGGAAGAGAATCTTTTTTCTACAAAC
ATATTGTCGGTAAAACTTTTTCTACAACCTAG

Upstream 100 bases:

>100_bases
AAAAGATTTGAGATTTGTAATGTTGCAAACTATCGATCTGACGAAATTTTAATATGGATGAGCCGAGGATGGTTTACCCC
TTTTCGTAAAAAGTAGGAAT

Downstream 100 bases:

>100_bases
ATCAAACCTAAATTCAAATACTTATTTGTGAATTTTTAGAGAATTGAAGATAAAATGAGAAAGAATTCTCTAAAAGTATG
AGTTCTTACATTTCTAAGTT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MPEKFSPLAVIVTFNPDITLTYKNVQNLNSNSIPVLIVDNRSKNVSLIRSKIGKQNFLVESESNLGLGFALNRGIEYAQT
NRYTHVWLFDQDSFLETSAIRIFLQKVREYGTQKFRNEKVASFGPNIFDTIKNRNIYGIPKNQTGILTAKFLITSGSFYS
LEVLKEVGLLYQDFFIDYLDYEWCFRANNKGYVHKIVSDVKMKHSIGTDSRSIFGIFKVAIHSPFRWYFLFRNGVYICKM
SHIPFCFKLEVVLKTFFRFLILPIFSDSKYQTYLHILCGIRDGITGRESFFYKHIVGKTFSTT

Sequences:

>Translated_303_residues
MPEKFSPLAVIVTFNPDITLTYKNVQNLNSNSIPVLIVDNRSKNVSLIRSKIGKQNFLVESESNLGLGFALNRGIEYAQT
NRYTHVWLFDQDSFLETSAIRIFLQKVREYGTQKFRNEKVASFGPNIFDTIKNRNIYGIPKNQTGILTAKFLITSGSFYS
LEVLKEVGLLYQDFFIDYLDYEWCFRANNKGYVHKIVSDVKMKHSIGTDSRSIFGIFKVAIHSPFRWYFLFRNGVYICKM
SHIPFCFKLEVVLKTFFRFLILPIFSDSKYQTYLHILCGIRDGITGRESFFYKHIVGKTFSTT
>Mature_302_residues
PEKFSPLAVIVTFNPDITLTYKNVQNLNSNSIPVLIVDNRSKNVSLIRSKIGKQNFLVESESNLGLGFALNRGIEYAQTN
RYTHVWLFDQDSFLETSAIRIFLQKVREYGTQKFRNEKVASFGPNIFDTIKNRNIYGIPKNQTGILTAKFLITSGSFYSL
EVLKEVGLLYQDFFIDYLDYEWCFRANNKGYVHKIVSDVKMKHSIGTDSRSIFGIFKVAIHSPFRWYFLFRNGVYICKMS
HIPFCFKLEVVLKTFFRFLILPIFSDSKYQTYLHILCGIRDGITGRESFFYKHIVGKTFSTT

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173
- InterPro:   IPR006446 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 35187; Mature: 35056

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKFSPLAVIVTFNPDITLTYKNVQNLNSNSIPVLIVDNRSKNVSLIRSKIGKQNFLVE
CCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEE
SESNLGLGFALNRGIEYAQTNRYTHVWLFDQDSFLETSAIRIFLQKVREYGTQKFRNEKV
CCCCCCEEEEECCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
ASFGPNIFDTIKNRNIYGIPKNQTGILTAKFLITSGSFYSLEVLKEVGLLYQDFFIDYLD
HHCCCHHHHHHCCCEEEECCCCCCCEEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHCC
YEWCFRANNKGYVHKIVSDVKMKHSIGTDSRSIFGIFKVAIHSPFRWYFLFRNGVYICKM
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEEECCEEEEEE
SHIPFCFKLEVVLKTFFRFLILPIFSDSKYQTYLHILCGIRDGITGRESFFYKHIVGKTF
CCCCEEEHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
STT
CCC
>Mature Secondary Structure 
PEKFSPLAVIVTFNPDITLTYKNVQNLNSNSIPVLIVDNRSKNVSLIRSKIGKQNFLVE
CCCCCCEEEEEEECCCEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEE
SESNLGLGFALNRGIEYAQTNRYTHVWLFDQDSFLETSAIRIFLQKVREYGTQKFRNEKV
CCCCCCEEEEECCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
ASFGPNIFDTIKNRNIYGIPKNQTGILTAKFLITSGSFYSLEVLKEVGLLYQDFFIDYLD
HHCCCHHHHHHCCCEEEECCCCCCCEEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHCC
YEWCFRANNKGYVHKIVSDVKMKHSIGTDSRSIFGIFKVAIHSPFRWYFLFRNGVYICKM
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEEECCEEEEEE
SHIPFCFKLEVVLKTFFRFLILPIFSDSKYQTYLHILCGIRDGITGRESFFYKHIVGKTF
CCCCEEEHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
STT
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7507920; 12384590; 12704152 [H]