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The map label for this gene is gmhA-2 [H]

Identifier: 116327910

GI number: 116327910

Start: 1411477

End: 1412112

Strand: Direct

Name: gmhA-2 [H]

Synonym: LBL_1196

Alternate gene names: 116327910

Gene position: 1411477-1412112 (Clockwise)

Preceding gene: 116327909

Following gene: 116327911

Centisome position: 39.05

GC content: 38.68

Gene sequence:

>636_bases
ATGAATCTATTAGAAAAAGCAAAGAGTTTTTCAAAAACATTTCAACAAGAATCCATCGAAGCGATTCAAAATTTGGATTT
AGATGCGATTGCGCAGGTTGTGGTTACTCTGTACGAGGCAAAAGAAAAAGGTAAGAACATATTTTTCTTTGGGAATGGAG
GAAGTCATGGAATCGCATCTCATTTAGCCTGTGATTTTGGCAAAGGAACTAAAAACTCGTCCAAGACAAATCAAAAGTAT
TATAAAGTTTTTGGACTGGATAACGCAGCTTGGCTCACTGCTCAAGCGAATGATGGCAAGGAACCGTTTATTCTTGGAAA
CTATCCAGGAACTTATACGCACGGATATGACGGAGTTTTTGTTGGACAAATGGAAAACTTTATCAATCCCGGGGACATCG
CGTTCGGCATTTCCAGCTCAGGGAATAGTCCCAATGTGATTAACGCATTGTTATTCGCTAAAGAGAAAGGCGCTAAAACG
ATCGCAATGGTTGGCTTTGACGGAGGGCAGGTATTAAAGATCGCAGATATGGTATTATTTGTACCTTCTGAAAAAGGAAA
GTATGGAATTATAGAAGGAGTTCATGAGGTCATTCATCATTTGCTCTATGAGTTTGCGGTTTTATTAGAAAAATAA

Upstream 100 bases:

>100_bases
TTCGTTTCAAAATACGTACAATCAAATTTAGGTTCGAAGAGATTAAGTGTCACGGCGTATTTTGTTTTAGTAGTTAACTC
TAAAAAAGGCAAATAAAGTT

Downstream 100 bases:

>100_bases
TATGAATTCAGTGAAGGAAAAGCTTAAGTCTGGCGGATTTACAATTGGATCTTGGATGCAAATTCCAAATACTTCGATCG
CGGAAATCTTAGGAAGTGCT

Product: phosphoheptose isomerase

Products: NA

Alternate protein names: Sedoheptulose 7-phosphate isomerase [H]

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MNLLEKAKSFSKTFQQESIEAIQNLDLDAIAQVVVTLYEAKEKGKNIFFFGNGGSHGIASHLACDFGKGTKNSSKTNQKY
YKVFGLDNAAWLTAQANDGKEPFILGNYPGTYTHGYDGVFVGQMENFINPGDIAFGISSSGNSPNVINALLFAKEKGAKT
IAMVGFDGGQVLKIADMVLFVPSEKGKYGIIEGVHEVIHHLLYEFAVLLEK

Sequences:

>Translated_211_residues
MNLLEKAKSFSKTFQQESIEAIQNLDLDAIAQVVVTLYEAKEKGKNIFFFGNGGSHGIASHLACDFGKGTKNSSKTNQKY
YKVFGLDNAAWLTAQANDGKEPFILGNYPGTYTHGYDGVFVGQMENFINPGDIAFGISSSGNSPNVINALLFAKEKGAKT
IAMVGFDGGQVLKIADMVLFVPSEKGKYGIIEGVHEVIHHLLYEFAVLLEK
>Mature_211_residues
MNLLEKAKSFSKTFQQESIEAIQNLDLDAIAQVVVTLYEAKEKGKNIFFFGNGGSHGIASHLACDFGKGTKNSSKTNQKY
YKVFGLDNAAWLTAQANDGKEPFILGNYPGTYTHGYDGVFVGQMENFINPGDIAFGISSSGNSPNVINALLFAKEKGAKT
IAMVGFDGGQVLKIADMVLFVPSEKGKYGIIEGVHEVIHHLLYEFAVLLEK

Specific function: Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate [H]

COG id: COG0279

COG function: function code G; Phosphoheptose isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1786416, Length=188, Percent_Identity=28.1914893617021, Blast_Score=78, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004515
- InterPro:   IPR020620
- InterPro:   IPR001347 [H]

Pfam domain/function: PF01380 SIS [H]

EC number: =5.3.1.28 [H]

Molecular weight: Translated: 22937; Mature: 22937

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLEKAKSFSKTFQQESIEAIQNLDLDAIAQVVVTLYEAKEKGKNIFFFGNGGSHGIAS
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHH
HLACDFGKGTKNSSKTNQKYYKVFGLDNAAWLTAQANDGKEPFILGNYPGTYTHGYDGVF
HHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCEE
VGQMENFINPGDIAFGISSSGNSPNVINALLFAKEKGAKTIAMVGFDGGQVLKIADMVLF
EECHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEE
VPSEKGKYGIIEGVHEVIHHLLYEFAVLLEK
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLLEKAKSFSKTFQQESIEAIQNLDLDAIAQVVVTLYEAKEKGKNIFFFGNGGSHGIAS
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHH
HLACDFGKGTKNSSKTNQKYYKVFGLDNAAWLTAQANDGKEPFILGNYPGTYTHGYDGVF
HHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCEE
VGQMENFINPGDIAFGISSSGNSPNVINALLFAKEKGAKTIAMVGFDGGQVLKIADMVLF
EECHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEE
VPSEKGKYGIIEGVHEVIHHLLYEFAVLLEK
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA