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The map label for this gene is 116327898

Identifier: 116327898

GI number: 116327898

Start: 1397747

End: 1398475

Strand: Direct

Name: 116327898

Synonym: LBL_1183

Alternate gene names: NA

Gene position: 1397747-1398475 (Clockwise)

Preceding gene: 116327897

Following gene: 116327899

Centisome position: 38.67

GC content: 33.06

Gene sequence:

>729_bases
TTGAAAGTAGGCATTTTAATCCAAGCAAGAATGGGGTCTACGAGGCTTCCAGGCAAAATCGCACTTCCGTTTGGCGATAC
AACGATCCTGGGTTTTATGTTAGAGCGTCTTAAGTTTTCTAAATTTCAGGAGAATGTTGTCGTTCTTACTACAGAAGAAA
ACATAGATGATAAAACCGAAGAGATAGCTAAGAAAAATGGAGTGAGCGTTTTTCGTGGATCTGCAAATGATTTGATCCAA
AGATATTTAGATGCAGCTAAAACATATAATATCGATATTATTGTTCGATTGACAGGAGACTGTCCTCTCATTGATTCAAA
AATCTTAGATTTGATGGTAGACCTTTTCTTATATAATCAAGGACGAATTGAATTTCTTACGAATTGTTTTCAAAGAACAT
TTGCCCGAGGGATGGATATTGAAATATTCACATTATCATTATTAGAAAAGTTGGATTCTATTTGCCGTCTCCCTTACGAA
AGGGAACATATTGTTCCTTACGTAGAGGAGAATACCGAAAAATTTAAGTTTTTTGAATATCCAAATGAAAGAGACGATTC
GAAATACCGTTTGACCATCGATACAATAGAAGATTATGAAACCTTAAAATCATGTATATCATATTTTTTATCTAAAGAAT
TTAGTTATGTAGATTTAATTGAGGTAATCAAAAAGAATCCCTCTATTATTCAGAATCAAACCATTTATCACAAGGCATAT
ACAGAGTAA

Upstream 100 bases:

>100_bases
GGTTAGTGGATTACCATTATAAAAGTAATAATACTTTATTACAGGGGTTAACTTTTTTCTTGGATCTTTTGGAAAATTAC
AAATATTTAAAGAAGCTGCA

Downstream 100 bases:

>100_bases
TGTATAATTTAGTTTTCAATTCATTCTCATCAAAGACCGTGTTAATCCAATGCGATCACAAAAGAAGAGATTCCGCTTCA
AGTTTTTTAATTGCATTTTA

Product: cytidylyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKVGILIQARMGSTRLPGKIALPFGDTTILGFMLERLKFSKFQENVVVLTTEENIDDKTEEIAKKNGVSVFRGSANDLIQ
RYLDAAKTYNIDIIVRLTGDCPLIDSKILDLMVDLFLYNQGRIEFLTNCFQRTFARGMDIEIFTLSLLEKLDSICRLPYE
REHIVPYVEENTEKFKFFEYPNERDDSKYRLTIDTIEDYETLKSCISYFLSKEFSYVDLIEVIKKNPSIIQNQTIYHKAY
TE

Sequences:

>Translated_242_residues
MKVGILIQARMGSTRLPGKIALPFGDTTILGFMLERLKFSKFQENVVVLTTEENIDDKTEEIAKKNGVSVFRGSANDLIQ
RYLDAAKTYNIDIIVRLTGDCPLIDSKILDLMVDLFLYNQGRIEFLTNCFQRTFARGMDIEIFTLSLLEKLDSICRLPYE
REHIVPYVEENTEKFKFFEYPNERDDSKYRLTIDTIEDYETLKSCISYFLSKEFSYVDLIEVIKKNPSIIQNQTIYHKAY
TE
>Mature_242_residues
MKVGILIQARMGSTRLPGKIALPFGDTTILGFMLERLKFSKFQENVVVLTTEENIDDKTEEIAKKNGVSVFRGSANDLIQ
RYLDAAKTYNIDIIVRLTGDCPLIDSKILDLMVDLFLYNQGRIEFLTNCFQRTFARGMDIEIFTLSLLEKLDSICRLPYE
REHIVPYVEENTEKFKFFEYPNERDDSKYRLTIDTIEDYETLKSCISYFLSKEFSYVDLIEVIKKNPSIIQNQTIYHKAY
TE

Specific function: Unknown

COG id: COG1861

COG function: function code M; Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003329 [H]

Pfam domain/function: PF02348 CTP_transf_3 [H]

EC number: NA

Molecular weight: Translated: 28202; Mature: 28202

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGILIQARMGSTRLPGKIALPFGDTTILGFMLERLKFSKFQENVVVLTTEENIDDKTE
CCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH
EIAKKNGVSVFRGSANDLIQRYLDAAKTYNIDIIVRLTGDCPLIDSKILDLMVDLFLYNQ
HHHHHCCCEEEECCHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC
GRIEFLTNCFQRTFARGMDIEIFTLSLLEKLDSICRLPYEREHIVPYVEENTEKFKFFEY
CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEEEC
PNERDDSKYRLTIDTIEDYETLKSCISYFLSKEFSYVDLIEVIKKNPSIIQNQTIYHKAY
CCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECC
TE
CC
>Mature Secondary Structure
MKVGILIQARMGSTRLPGKIALPFGDTTILGFMLERLKFSKFQENVVVLTTEENIDDKTE
CCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH
EIAKKNGVSVFRGSANDLIQRYLDAAKTYNIDIIVRLTGDCPLIDSKILDLMVDLFLYNQ
HHHHHCCCEEEECCHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC
GRIEFLTNCFQRTFARGMDIEIFTLSLLEKLDSICRLPYEREHIVPYVEENTEKFKFFEY
CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEEEC
PNERDDSKYRLTIDTIEDYETLKSCISYFLSKEFSYVDLIEVIKKNPSIIQNQTIYHKAY
CCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECC
TE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]