Click here to switch to the map view.

The map label for this gene is sufB-2 [C]

Identifier: 116327451

GI number: 116327451

Start: 746421

End: 747617

Strand: Direct

Name: sufB-2 [C]

Synonym: LBL_0667

Alternate gene names: 116327451

Gene position: 746421-747617 (Clockwise)

Preceding gene: 116327450

Following gene: 116327452

Centisome position: 20.65

GC content: 44.36

Gene sequence:

>1197_bases
ATGTTTTTAGAAACTCAGTTTGAGAATTTGCTTTCCCGTAGCGGAGAACCTCAGGCTCTGAAAGATTTTCGCGTCAAGGT
CTTTGCAAAATTCCGCACTCTGAAAATTCCGGGATCGGAAAACGAATCCTGGAGAAAAATTCCGCTTTCTAATTTTCATC
CGGAAGAATTCGTCGAAACCCCCGGCATAAACGCGATTTCTTGGAAAGTTCCCGATGGTGTCAAACTTCAAAGAGCGGAC
TCTCTTTCCGGAAAAGAACTCGAATTCTTTTTAAACAACCTTGAAAGTATATTTCAAAAACGGAATGAAGAATGGTTTAC
GCTTTACAGTCTTTCCAGCTTTACTCATGGAATCTATATCGAAGTGGAAAACGATCTCATTCTCAAGGAGGAAATCGAAA
TCAAGTTTCGACTTGAGAAGGAAAATAAAATTCTTCCCATTCTTGTGGTAAAAATCGGAAACCACAGCAAGGCGTTTATC
GCCGAACGGTACGAATGCCCGGAAGAGAAAGACTTCAAACTTTTACAAGGTCTTACCGTGATTTACACGGGGGCCGGATC
TAGAGTTTCTTATGTCGGAATTGAATCCTTTGGTTCTTCCGTATTCCATTTTCAGAATTTGTTTTCCGATCAAAAAGAGG
ACTCGGACGTTAAGATCGCAAAAATCACCCCCGGGGGATATAAAGGCAAAAATCTTATAGGCGTCGAACTTTCCGGCAAA
GGCGCAAGGGCCAGAGTGATCGGACTCGCTCCGATGACAGGCCGGGAATTTCAGGACTCCGAAGTCAAGATCGTTCACAA
GGAAAGTCATACGGAAAGCTCGATTCTTTACAGAGGCGCTTTCAAGGATAAGGCGCATCATATTTTTACCGGAAATCTTC
ATATTCCGAATTCCTGCAAGGACGTGAACGCGATCCAGATCAACAATAACCTTCTTTTGGGCCGTTCCGCGAGAGCCGAG
TCGATTCCGAAACTCGAAGTATATGCGGAGAATGTAAAGTGTGAACATGGAGCCACCGTCGGTGAGATCGACGAAGAACA
GTTGTTCTATCTGGCTTCCCGCGGAATCGACGAGGACGAGGCCAGAAGGATGATCGTGGAGGGGTTTCTAGGCCAAGTCA
TCGGTGAAATCGAATCGGATTCTATACAACAAGAGCTTTTCGAGTTGATTGTATACAAAGTGGAAGGTCCAATATGA

Upstream 100 bases:

>100_bases
AAGGGAAAAATCCTCAAAACCGGAACGAGAGAACTCGCGCTGGAATTGGAAGAGAAGGGATACGACCGGGTCCTTGTAGA
ATCCGGAGACTGAAACGAAA

Downstream 100 bases:

>100_bases
GCTTTCGTAAACTCGCAAATCTGTCCGAGGTCGAAAACGGGAAAGTCAAAGTAGTTGAAACCAGATATAATAGAATCGGG
ATCACGAGTTTGGACGGTAA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MFLETQFENLLSRSGEPQALKDFRVKVFAKFRTLKIPGSENESWRKIPLSNFHPEEFVETPGINAISWKVPDGVKLQRAD
SLSGKELEFFLNNLESIFQKRNEEWFTLYSLSSFTHGIYIEVENDLILKEEIEIKFRLEKENKILPILVVKIGNHSKAFI
AERYECPEEKDFKLLQGLTVIYTGAGSRVSYVGIESFGSSVFHFQNLFSDQKEDSDVKIAKITPGGYKGKNLIGVELSGK
GARARVIGLAPMTGREFQDSEVKIVHKESHTESSILYRGAFKDKAHHIFTGNLHIPNSCKDVNAIQINNNLLLGRSARAE
SIPKLEVYAENVKCEHGATVGEIDEEQLFYLASRGIDEDEARRMIVEGFLGQVIGEIESDSIQQELFELIVYKVEGPI

Sequences:

>Translated_398_residues
MFLETQFENLLSRSGEPQALKDFRVKVFAKFRTLKIPGSENESWRKIPLSNFHPEEFVETPGINAISWKVPDGVKLQRAD
SLSGKELEFFLNNLESIFQKRNEEWFTLYSLSSFTHGIYIEVENDLILKEEIEIKFRLEKENKILPILVVKIGNHSKAFI
AERYECPEEKDFKLLQGLTVIYTGAGSRVSYVGIESFGSSVFHFQNLFSDQKEDSDVKIAKITPGGYKGKNLIGVELSGK
GARARVIGLAPMTGREFQDSEVKIVHKESHTESSILYRGAFKDKAHHIFTGNLHIPNSCKDVNAIQINNNLLLGRSARAE
SIPKLEVYAENVKCEHGATVGEIDEEQLFYLASRGIDEDEARRMIVEGFLGQVIGEIESDSIQQELFELIVYKVEGPI
>Mature_398_residues
MFLETQFENLLSRSGEPQALKDFRVKVFAKFRTLKIPGSENESWRKIPLSNFHPEEFVETPGINAISWKVPDGVKLQRAD
SLSGKELEFFLNNLESIFQKRNEEWFTLYSLSSFTHGIYIEVENDLILKEEIEIKFRLEKENKILPILVVKIGNHSKAFI
AERYECPEEKDFKLLQGLTVIYTGAGSRVSYVGIESFGSSVFHFQNLFSDQKEDSDVKIAKITPGGYKGKNLIGVELSGK
GARARVIGLAPMTGREFQDSEVKIVHKESHTESSILYRGAFKDKAHHIFTGNLHIPNSCKDVNAIQINNNLLLGRSARAE
SIPKLEVYAENVKCEHGATVGEIDEEQLFYLASRGIDEDEARRMIVEGFLGQVIGEIESDSIQQELFELIVYKVEGPI

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=172, Percent_Identity=31.9767441860465, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI87081955, Length=141, Percent_Identity=28.3687943262411, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 45068; Mature: 45068

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLETQFENLLSRSGEPQALKDFRVKVFAKFRTLKIPGSENESWRKIPLSNFHPEEFVET
CCCHHHHHHHHHCCCCCCHHHHHHHEEEEEEEEEECCCCCCCCEEECCCCCCCHHHHHCC
PGINAISWKVPDGVKLQRADSLSGKELEFFLNNLESIFQKRNEEWFTLYSLSSFTHGIYI
CCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEE
EVENDLILKEEIEIKFRLEKENKILPILVVKIGNHSKAFIAERYECPEEKDFKLLQGLTV
EECCCEEEEEEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCHHHHCCEEE
IYTGAGSRVSYVGIESFGSSVFHFQNLFSDQKEDSDVKIAKITPGGYKGKNLIGVELSGK
EEECCCCEEEEEEHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCC
GARARVIGLAPMTGREFQDSEVKIVHKESHTESSILYRGAFKDKAHHIFTGNLHIPNSCK
CCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCEEEECCEECCCCCC
DVNAIQINNNLLLGRSARAESIPKLEVYAENVKCEHGATVGEIDEEQLFYLASRGIDEDE
CCEEEEECCCEEEECCCCCCCCCEEEEEEECEEECCCCCCCCCCHHHHHHHHHCCCCHHH
ARRMIVEGFLGQVIGEIESDSIQQELFELIVYKVEGPI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEHEECCCC
>Mature Secondary Structure
MFLETQFENLLSRSGEPQALKDFRVKVFAKFRTLKIPGSENESWRKIPLSNFHPEEFVET
CCCHHHHHHHHHCCCCCCHHHHHHHEEEEEEEEEECCCCCCCCEEECCCCCCCHHHHHCC
PGINAISWKVPDGVKLQRADSLSGKELEFFLNNLESIFQKRNEEWFTLYSLSSFTHGIYI
CCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEE
EVENDLILKEEIEIKFRLEKENKILPILVVKIGNHSKAFIAERYECPEEKDFKLLQGLTV
EECCCEEEEEEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCHHHHCCEEE
IYTGAGSRVSYVGIESFGSSVFHFQNLFSDQKEDSDVKIAKITPGGYKGKNLIGVELSGK
EEECCCCEEEEEEHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCC
GARARVIGLAPMTGREFQDSEVKIVHKESHTESSILYRGAFKDKAHHIFTGNLHIPNSCK
CCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCEEEECCEECCCCCC
DVNAIQINNNLLLGRSARAESIPKLEVYAENVKCEHGATVGEIDEEQLFYLASRGIDEDE
CCEEEEECCCEEEECCCCCCCCCEEEEEEECEEECCCCCCCCCCHHHHHHHHHCCCCHHH
ARRMIVEGFLGQVIGEIESDSIQQELFELIVYKVEGPI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]