Click here to switch to the map view.

The map label for this gene is 116327346

Identifier: 116327346

GI number: 116327346

Start: 595702

End: 596958

Strand: Direct

Name: 116327346

Synonym: LBL_0542

Alternate gene names: NA

Gene position: 595702-596958 (Clockwise)

Preceding gene: 116327345

Following gene: 116327347

Centisome position: 16.48

GC content: 36.2

Gene sequence:

>1257_bases
ATGAAACCGAGCGCTTTTACTCGGAATCGTCAACTAACCCTACCGAGGTTGCTGATAGCCATGATAAACTTATTAAACAA
AAGCTTAGCGGTCGAGTTATATAGATATTTTAAGAATTTAGGAAAGAAAGCTGTAACGAAACAGGCGTTTTCCTTTACGC
GGGAGAATTTAAATCCGCAAGTGTTTGAATCGTTAAACGAAATATTTGTAAACAGCTACTACAAAAATGTAACGAATTGC
AAAACGCATAAAGGTTATATAGTTGCAGCTTGCGACGCAACAGGAATAAGCCTACCTAAAACGAAGGAGTTCGTGAAAGA
TTTTGGCTGTGTAAAAAATCAACTGGGGGAATCGGAATCGCCGAATGCCAATAGTTCGATTATATTTGATATTTATAATG
ATATAATATTGAGTTCTACCGTTGGTCCGCATAGAACGAGTGAAAGGTCAATGGCGTTGCATCATATCGAGAAACTTAGA
TCGATCTCGGCTCTTCAAAATAAGAAATTGATTCTTCTTTTCGACAGGGGCTATCCATCGATGGAACTAATCGGAAAGTT
AATGGCAAACGGAATCCATTTTATCATTAGAAGCAACACTCGTTGGCTCAAAGAGGCAAAAATTGCAGGGGAATACAAAG
AATACGACAAAGTTAAAAACATTCTTATCACTAACAATATGCAAAAGAAGAAGGAATGGCTTAAGGAATATGCGAATACG
AAAGGAAATCTGTTTTCATTACGTTTTGTCGGCTCAAGATATAAAGACGGACAAGTCGGAATTTTTGTCACCGATCTTCC
CGATTCCGAATTTTCAAGAGAAGCTATTGTTTCCCTCTACGGCAAACGTTGGAATATAGAAACTCATTTTCGTTTCGAAA
AATATTCTCTTGAATTGGAGAATGTAGCACCCAAAACTTCAATCCGATTTCTTCAAGAATATTATGCAAAAATCTTAACA
TTTAATCTTGCCTCTCTTCTAATCCAAGAAGCGCAAGAAGAATACGATCAATCGATTCAAAACAAAAAAGTAAAAACAAA
ATATGATTATAAAATTACTAGAAATATCGCGATCGGCATTCTAAAAGGAGAACTTCCAAGGTTACTTTCTGGAACTGAAC
CGATGAACTCCGTTTTTGATGAAATGAAAGCCGTACTTATAAAACATCGGCTACCTGTCATTCCAAATAGAACCTTCAAT
AGAAAACATAAAGTTCGAAAACGTAAGTTTGAAATCTATTACGGCAGAGTCTCTTAA

Upstream 100 bases:

>100_bases
AGAATTTAGTACGACAAGAAGACATGGGCAAGAAAGAATTACAATCATAGTCGAATTAGAAGCTTGGATTTATTCCAGAA
AGATTCTGGAAATCGCGCGA

Downstream 100 bases:

>100_bases
ATTGACAGCATTGACCTACGGGTCACGCTCGAAGAAACTAAGGCGTCTCGCTTCTATTGGCGCTCTACGGGTTTTGGGCC
GCGCTGTAAAATAAGTTTAC

Product: transposase ISLbp1

Products: NA

Alternate protein names: Transposase; IS4 Family Transposase; Transposase DDE Domain-Containing Protein; LOW QUALITY PROTEIN Transposase; Transposase IS4 Family; ISLbp1 Transposase

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MKPSAFTRNRQLTLPRLLIAMINLLNKSLAVELYRYFKNLGKKAVTKQAFSFTRENLNPQVFESLNEIFVNSYYKNVTNC
KTHKGYIVAACDATGISLPKTKEFVKDFGCVKNQLGESESPNANSSIIFDIYNDIILSSTVGPHRTSERSMALHHIEKLR
SISALQNKKLILLFDRGYPSMELIGKLMANGIHFIIRSNTRWLKEAKIAGEYKEYDKVKNILITNNMQKKKEWLKEYANT
KGNLFSLRFVGSRYKDGQVGIFVTDLPDSEFSREAIVSLYGKRWNIETHFRFEKYSLELENVAPKTSIRFLQEYYAKILT
FNLASLLIQEAQEEYDQSIQNKKVKTKYDYKITRNIAIGILKGELPRLLSGTEPMNSVFDEMKAVLIKHRLPVIPNRTFN
RKHKVRKRKFEIYYGRVS

Sequences:

>Translated_418_residues
MKPSAFTRNRQLTLPRLLIAMINLLNKSLAVELYRYFKNLGKKAVTKQAFSFTRENLNPQVFESLNEIFVNSYYKNVTNC
KTHKGYIVAACDATGISLPKTKEFVKDFGCVKNQLGESESPNANSSIIFDIYNDIILSSTVGPHRTSERSMALHHIEKLR
SISALQNKKLILLFDRGYPSMELIGKLMANGIHFIIRSNTRWLKEAKIAGEYKEYDKVKNILITNNMQKKKEWLKEYANT
KGNLFSLRFVGSRYKDGQVGIFVTDLPDSEFSREAIVSLYGKRWNIETHFRFEKYSLELENVAPKTSIRFLQEYYAKILT
FNLASLLIQEAQEEYDQSIQNKKVKTKYDYKITRNIAIGILKGELPRLLSGTEPMNSVFDEMKAVLIKHRLPVIPNRTFN
RKHKVRKRKFEIYYGRVS
>Mature_418_residues
MKPSAFTRNRQLTLPRLLIAMINLLNKSLAVELYRYFKNLGKKAVTKQAFSFTRENLNPQVFESLNEIFVNSYYKNVTNC
KTHKGYIVAACDATGISLPKTKEFVKDFGCVKNQLGESESPNANSSIIFDIYNDIILSSTVGPHRTSERSMALHHIEKLR
SISALQNKKLILLFDRGYPSMELIGKLMANGIHFIIRSNTRWLKEAKIAGEYKEYDKVKNILITNNMQKKKEWLKEYANT
KGNLFSLRFVGSRYKDGQVGIFVTDLPDSEFSREAIVSLYGKRWNIETHFRFEKYSLELENVAPKTSIRFLQEYYAKILT
FNLASLLIQEAQEEYDQSIQNKKVKTKYDYKITRNIAIGILKGELPRLLSGTEPMNSVFDEMKAVLIKHRLPVIPNRTFN
RKHKVRKRKFEIYYGRVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48493; Mature: 48493

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSAFTRNRQLTLPRLLIAMINLLNKSLAVELYRYFKNLGKKAVTKQAFSFTRENLNPQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VFESLNEIFVNSYYKNVTNCKTHKGYIVAACDATGISLPKTKEFVKDFGCVKNQLGESES
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PNANSSIIFDIYNDIILSSTVGPHRTSERSMALHHIEKLRSISALQNKKLILLFDRGYPS
CCCCCEEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
MELIGKLMANGIHFIIRSNTRWLKEAKIAGEYKEYDKVKNILITNNMQKKKEWLKEYANT
HHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHCC
KGNLFSLRFVGSRYKDGQVGIFVTDLPDSEFSREAIVSLYGKRWNIETHFRFEKYSLELE
CCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEHEEEHH
NVAPKTSIRFLQEYYAKILTFNLASLLIQEAQEEYDQSIQNKKVKTKYDYKITRNIAIGI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECEEEECCEEEEE
LKGELPRLLSGTEPMNSVFDEMKAVLIKHRLPVIPNRTFNRKHKVRKRKFEIYYGRVS
ECCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEEEEEECC
>Mature Secondary Structure
MKPSAFTRNRQLTLPRLLIAMINLLNKSLAVELYRYFKNLGKKAVTKQAFSFTRENLNPQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VFESLNEIFVNSYYKNVTNCKTHKGYIVAACDATGISLPKTKEFVKDFGCVKNQLGESES
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PNANSSIIFDIYNDIILSSTVGPHRTSERSMALHHIEKLRSISALQNKKLILLFDRGYPS
CCCCCEEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
MELIGKLMANGIHFIIRSNTRWLKEAKIAGEYKEYDKVKNILITNNMQKKKEWLKEYANT
HHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHCC
KGNLFSLRFVGSRYKDGQVGIFVTDLPDSEFSREAIVSLYGKRWNIETHFRFEKYSLELE
CCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEHEEEHH
NVAPKTSIRFLQEYYAKILTFNLASLLIQEAQEEYDQSIQNKKVKTKYDYKITRNIAIGI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECEEEECCEEEEE
LKGELPRLLSGTEPMNSVFDEMKAVLIKHRLPVIPNRTFNRKHKVRKRKFEIYYGRVS
ECCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA