| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327258
Identifier: 116327258
GI number: 116327258
Start: 505747
End: 506505
Strand: Direct
Name: 116327258
Synonym: LBL_0447
Alternate gene names: NA
Gene position: 505747-506505 (Clockwise)
Preceding gene: 116327255
Following gene: 116327259
Centisome position: 13.99
GC content: 44.8
Gene sequence:
>759_bases ATGAAACGTTTTTATATCGGATCTTTTCTTTTGATTATTTTTTCGGCGACTTTTTTCAATTGCGAACATCGGGATCAAAA TAAGGTGGATCTAAAGGTACTTGTTGCAGCAACCGGAAACGTAATCCTCATAAACGGAGAGGTGGATTCCGATAAAATTT CCTCTTGTGGAGTTGCGGTTCCCGGCACCGCCGCCTCTGGAACGGCGTCGGGTACCACGGGGGGAAATACCGGAACCACA ACAACTACCTCGGGTTCTTCCGGTTCCAATACTCGTTATACGATCACAAGTCAGTTGATTATGAAGAATACAGCCGAAGC GATGGTTCTTCGATTCCAATTCGATTCAGTTCAGTATCAAGGGGCGGTGGATCCACAACAAGGTTTTAGTTATTCGGGTG GAGTTTTCGGTAGAACAGTTACCGGTAATGTCGGTAAAGTAGAATGGGGATCTTCCGGAATTCCGGTATATCCAACAGGA AATGGCGCTGCTCAACAGCAAACCCTACAATATATGGACATCGATATTTCCCTTTCCGGAAAAATACTTGATAGTTCTAC GAGCACGGGGATTCTCAATCAGTGTTATACTTCGGATAACGTTAATTGTACTTCAGTTACGACGACTCAACAATGTTTTA CTCAGGATAATCATTCCTGCGTTTCCACCGCATCGGCTTCAGGTTCCGCGGTTACTATTACCGGAAGAATCGCTTGTAAT GCGCCTAATGTGATTCCAGGTGGAGGTTCTACGCAATGA
Upstream 100 bases:
>100_bases AACGATCTTTTACATACGGGGTCGAAATCGGAAAGTGGTGGGTTCATTTTCATTCTTGACCAAGATTTGCTTTTCGATCA ATATAACTCTAAAGGTATTT
Downstream 100 bases:
>100_bases TCTTAAATTGGCGCTATTCGTTTTCGATTTTTAATTGCATTTAAATTTTATAAAATTCTAATGCAATTTGATTCCTTAAA TAGGGAACCTCCATAAAAAT
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKRFYIGSFLLIIFSATFFNCEHRDQNKVDLKVLVAATGNVILINGEVDSDKISSCGVAVPGTAASGTASGTTGGNTGTT TTTSGSSGSNTRYTITSQLIMKNTAEAMVLRFQFDSVQYQGAVDPQQGFSYSGGVFGRTVTGNVGKVEWGSSGIPVYPTG NGAAQQQTLQYMDIDISLSGKILDSSTSTGILNQCYTSDNVNCTSVTTTQQCFTQDNHSCVSTASASGSAVTITGRIACN APNVIPGGGSTQ
Sequences:
>Translated_252_residues MKRFYIGSFLLIIFSATFFNCEHRDQNKVDLKVLVAATGNVILINGEVDSDKISSCGVAVPGTAASGTASGTTGGNTGTT TTTSGSSGSNTRYTITSQLIMKNTAEAMVLRFQFDSVQYQGAVDPQQGFSYSGGVFGRTVTGNVGKVEWGSSGIPVYPTG NGAAQQQTLQYMDIDISLSGKILDSSTSTGILNQCYTSDNVNCTSVTTTQQCFTQDNHSCVSTASASGSAVTITGRIACN APNVIPGGGSTQ >Mature_252_residues MKRFYIGSFLLIIFSATFFNCEHRDQNKVDLKVLVAATGNVILINGEVDSDKISSCGVAVPGTAASGTASGTTGGNTGTT TTTSGSSGSNTRYTITSQLIMKNTAEAMVLRFQFDSVQYQGAVDPQQGFSYSGGVFGRTVTGNVGKVEWGSSGIPVYPTG NGAAQQQTLQYMDIDISLSGKILDSSTSTGILNQCYTSDNVNCTSVTTTQQCFTQDNHSCVSTASASGSAVTITGRIACN APNVIPGGGSTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26106; Mature: 26106
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFYIGSFLLIIFSATFFNCEHRDQNKVDLKVLVAATGNVILINGEVDSDKISSCGVAV CCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHCCEEC PGTAASGTASGTTGGNTGTTTTTSGSSGSNTRYTITSQLIMKNTAEAMVLRFQFDSVQYQ CCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCEEEC GAVDPQQGFSYSGGVFGRTVTGNVGKVEWGSSGIPVYPTGNGAAQQQTLQYMDIDISLSG CCCCHHHCCCCCCCCEEEEEECCCCEEEECCCCCEEEECCCCHHHHHEEEEEEEEEEECC KILDSSTSTGILNQCYTSDNVNCTSVTTTQQCFTQDNHSCVSTASASGSAVTITGRIACN EEEECCCCCCHHHHHCCCCCCEEEEEECHHHHHCCCCCCEEEECCCCCCEEEEEEEEEEC APNVIPGGGSTQ CCCCCCCCCCCC >Mature Secondary Structure MKRFYIGSFLLIIFSATFFNCEHRDQNKVDLKVLVAATGNVILINGEVDSDKISSCGVAV CCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHCCEEC PGTAASGTASGTTGGNTGTTTTTSGSSGSNTRYTITSQLIMKNTAEAMVLRFQFDSVQYQ CCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCEEEC GAVDPQQGFSYSGGVFGRTVTGNVGKVEWGSSGIPVYPTGNGAAQQQTLQYMDIDISLSG CCCCHHHCCCCCCCCEEEEEECCCCEEEECCCCCEEEECCCCHHHHHEEEEEEEEEEECC KILDSSTSTGILNQCYTSDNVNCTSVTTTQQCFTQDNHSCVSTASASGSAVTITGRIACN EEEECCCCCCHHHHHCCCCCCEEEEEECHHHHHCCCCCCEEEECCCCCCEEEEEEEEEEC APNVIPGGGSTQ CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA